Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq213871 134 1e-26 seq197295 105 6e-18 >seq213871 Length=423 Score = 134 bits (148), Expect = 1e-26 Identities = 166/225 (74%), Gaps = 4/225 (2%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739 ||||||| ||| ||||||||| || ||||| |||||||| |||||||| |||||||| Sbjct 354 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAAGCCTCGTTT 297 Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799 ||| ||||||||||||| ||| || || || || |||||||||||||| || ||||| Sbjct 296 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 237 Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859 || || | ||||||||||| | || | ||| | ||||| | | ||||| || Sbjct 236 AGCGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 177 Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904 | || || |||||| | | || || ||||||||||| || Sbjct 176 TGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAACAA 132 >seq197295 Length=1118 Score = 105 bits (116), Expect = 6e-18 Identities = 158/223 (71%), Gaps = 6/223 (3%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 || || || ||||| | ||| ||||| || || || | ||||| ||||| || ||| Sbjct 730 ATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGA 671 Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---CGAGTAAAATCTTTCTGCC 14046 |||||||| || || || ||||| | | ||| ||||| |||| || | || || Sbjct 670 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAGAAA---CGCTCCACC 614 Query 14047 AAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAG 14106 ||||| |||||||||||||||||| ||| ||||| ||||| || | | ||| ||||| Sbjct 613 AAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAA 554 Query 14107 TATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149 | || ||| || || | | | | |||||| || || |||| Sbjct 553 TGTTTCTCGCAATCTTTTAATGTCTCCCAATCTGCCAAGTCCT 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476657849733360