Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq213871 134 1e-26
seq197295 105 6e-18
>seq213871
Length=423
Score = 134 bits (148), Expect = 1e-26
Identities = 166/225 (74%), Gaps = 4/225 (2%)
Strand=Plus/Minus
Query 13682 CCTCATCTCTACTAATAAGTTCGTT--TGAAAATGTTAATCCTGGCATCAATCCTCGttt 13739
||||||| ||| ||||||||| || ||||| |||||||| |||||||| ||||||||
Sbjct 354 CCTCATCCCTAGAAATAAGTTCATTGCTGAAA--GTTAATCCGGGCATCAAGCCTCGTTT 297
Query 13740 ttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAA 13799
||| ||||||||||||| ||| || || || || |||||||||||||| || |||||
Sbjct 296 TTTCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAA 237
Query 13800 CGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTC 13859
|| || | ||||||||||| | || | ||| | ||||| | | ||||| ||
Sbjct 236 AGCGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTC 177
Query 13860 AGAtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAA 13904
| || || |||||| | | || || ||||||||||| ||
Sbjct 176 TGCCTTCTTCTTAATACATGGTAGAGTCTCAATTGCATTGAACAA 132
>seq197295
Length=1118
Score = 105 bits (116), Expect = 6e-18
Identities = 158/223 (71%), Gaps = 6/223 (3%)
Strand=Plus/Minus
Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989
|| || || ||||| | ||| ||||| || || || | ||||| ||||| || |||
Sbjct 730 ATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGA 671
Query 13990 AAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC---CGAGTAAAATCTTTCTGCC 14046
|||||||| || || || ||||| | | ||| ||||| |||| || | || ||
Sbjct 670 AAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAGAAA---CGCTCCACC 614
Query 14047 AAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAG 14106
||||| |||||||||||||||||| ||| ||||| ||||| || | | ||| |||||
Sbjct 613 AAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAA 554
Query 14107 TATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCT 14149
| || ||| || || | | | | |||||| || || ||||
Sbjct 553 TGTTTCTCGCAATCTTTTAATGTCTCCCAATCTGCCAAGTCCT 511
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476657849733360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |