Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq153336 91.5 1e-13 seq117972 89.7 4e-13 >seq153336 Length=250 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 ||||| || || | ||| ||||| || | || || || |||| ||| || | || Sbjct 21 AACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCT 80 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 |||| ||| || ||||| |||||||||| ||||| || | || | ||||| || || Sbjct 81 TCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCT 140 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 ||| | || || | | | ||| || ||| || || |||| || |||||| Sbjct 141 TGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGTT 200 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 ||||| ||||| ||||| ||||||||||||||| Sbjct 201 TTTCCAGTTAGTGTTTTTACAAAAATTTGCATT 233 >seq117972 Length=685 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 || ||||| | ||| || ||||| | ||||| || || | |||||| | || ||| Sbjct 292 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCC 351 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 ||||| ||||| || ||||| | || |||||||| | || | |||||||| || | Sbjct 352 AATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 411 Query 43021 ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTT 43080 || | || || | ||| |||||| || || || |||| || || ||||| Sbjct 412 ATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTG 471 Query 43081 CCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || ||||| |||||||||||||| Sbjct 472 CCAGTAAGTGTTTTAACAAAAATTTGCAT 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379869365168892