Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq5177 529 2e-145 seq197295 100 4e-16 >seq5177 Length=4331 Score = 529 bits (586), Expect = 2e-145 Identities = 1091/1611 (68%), Gaps = 23/1611 (1%) Strand=Plus/Minus Query 70783 ATTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAG 70842 ||||| | ||||| | ||||||||||| | | | ||| | ||| || |||| ||| Sbjct 3775 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 3716 Query 70843 TACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 70902 ||||| |||||||||| ||| | |||| ||| ||||| || ||||||||| | Sbjct 3715 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 3656 Query 70903 TAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTG 70962 ||| |||| | || | || || || | || |||||||| || || || ||||| || Sbjct 3655 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 3596 Query 70963 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 71021 || || ||||| | |||| || || ||| ||| ||||| | ||||| || || || Sbjct 3595 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 3536 Query 71022 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCA-ATAATCC 71077 |||| | |||| || | ||| | |||| | || |||||| | || | ||||| Sbjct 3535 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGT-TGTATATAATAA 3478 Query 71078 TATTTTTGATCTCTTCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGAGGA 71136 |||||| || ||||||| |||||| | |||| || ||| | | || |||||| | Sbjct 3477 GATTTTTCATATCTTCATCCCATAAATCAG-CTCGAGTCAAATCAGTCAGAAGATGATGG 3419 Query 71137 TTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGT 71196 || ||||| ||||||||||||| || ||||| | ||||||||| ||| | ||| Sbjct 3418 TTCACTACAGGAAATTCTCCAGATAAAACTCTTCTTTGGTAAATATTTGATGTAAATGGT 3359 Query 71197 TCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 71256 || | || ||| | || || | |||||| ||||| || ||||||||||||||||| | | Sbjct 3358 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATC 3299 Query 71257 AATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAA 71316 |||||| ||| | | ||||||| | || || ||||| || |||| | |||| Sbjct 3298 AATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTCCCAA 3239 Query 71317 AGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGAT 71376 || || | || || || | ||||| | Sbjct 3238 AGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTT 3179 Query 71377 CCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCT 71436 ||| |||||| ||||| ||||||||||| |||| ||||||||| || |||||||| Sbjct 3178 CCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCA 3119 Query 71437 CCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAAT 71496 ||||||||||| ||||| || || | | ||| || | ||||| | || || | Sbjct 3118 CCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAA 3059 Query 71497 GGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCT 71555 || || | | | | | ||| | ||||| | || ||||| |||||||||||||| | Sbjct 3058 GG-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGACG 3000 Query 71556 GTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 71615 ||| ||| |||| ||| ||| ||||| || | ||||||| | |||| ||| || | ||| Sbjct 2999 GTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTT 2940 Query 71616 ATTGAGATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCC 71674 || | |||| ||| | | | | | | || |||| ||| |||| ||||| Sbjct 2939 GTTTAAATTT-TGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAACTAAATCGAT 2881 Query 71675 CATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 71734 || | ||||||| ||| | || | || || || || || || || || |||| Sbjct 2880 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT--- 2824 Query 71735 CATCGGCA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791 | || | | ||||| | || |||||||||||||| ||||| || || || || | || Sbjct 2823 CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 2764 Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851 ||| ||||||||||||| |||| || ||||||||||| | ||| | || |||||||| | Sbjct 2763 TTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCT 2704 Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATC 71911 | | |||| ||||||||| | ||||| | || |||| | | | || | | | Sbjct 2703 CCACTTGAGCTTCTATAATAGACTTCCATAACTCTTGAGCTCTGACTCGTTTTATAAACC 2644 Query 71912 TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971 |||||| ||| |||| | ||||| |||||| || ||||| || | | | Sbjct 2643 GTTTTTCTTCTTCATATTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAGTCAGCGA 2584 Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031 |||||||| |||| |||||||| | ||| ||| |||| | | ||| | ||||| Sbjct 2583 GGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCA 2524 Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091 |||| ||||| || ||||| | ||| ||| || ||||| | ||| || || || | Sbjct 2523 TAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTAC 2464 Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151 |||| |||||||| | ||| | |||| | | || || | |||||| || || ||||| | Sbjct 2463 CTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAA 2404 Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 | || | | || || ||||||||||| || ||||||| ||||| || || || || | Sbjct 2403 TTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGT 2344 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | |||||||||||||| | | |||||| || | ||||| || || | ||||| | Sbjct 2343 ACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACC 2284 Query 72272 CACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 | ||| | ||| | || || || |||||| || || || |||||| ||||| Sbjct 2283 CCTGGGCTCTAATGCAATGTGTAT--GTAAACCTATGCCACCGGCAGATTTAGAAATTAA 2226 Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380 ||| ||| ||||||| ||||| | || || || || ||||| || |||| Sbjct 2225 TGCACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCAT 2175 Score = 96.9 bits (106), Expect = 5e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620 ||| || ||||| |||||||| || ||| ||||||||||||||||||||||||||||||| Sbjct 1678 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 1619 Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671 | ||| |||| || |||| ||| | || | | ||| ||||| | ||| Sbjct 1618 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 1568 Score = 91.5 bits (100), Expect = 2e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 72772 ttttttgtttCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831 || || || || || |||| ||| |||| ||||||||||| || | |||||||||||| Sbjct 1022 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 963 Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891 ||||| | ||| || ||| ||||| ||||| || || ||| | || | || | ||| Sbjct 962 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 903 Query 72892 GTTACTCCATTATATATTCC 72911 ||||| ||| |||||| || Sbjct 902 GTTACACCAGAATATATGCC 883 >seq197295 Length=1118 Score = 100 bits (110), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610 ||||||| |||||||||||| | |||||||| |||||||| || ||||||||||| | | Sbjct 393 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 334 Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 || || || ||||||| |||||||| ||||| || Sbjct 333 CATATGTCGGGATATTGGATTGGGAATATAACGAA 299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 668431371448240