Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 529 2e-145
seq197295 100 4e-16
>seq5177
Length=4331
Score = 529 bits (586), Expect = 2e-145
Identities = 1091/1611 (68%), Gaps = 23/1611 (1%)
Strand=Plus/Minus
Query 70783 ATTTTTTCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAG 70842
||||| | ||||| | ||||||||||| | | | ||| | ||| || |||| |||
Sbjct 3775 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAGTAG 3716
Query 70843 TACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAA 70902
||||| |||||||||| ||| | |||| ||| ||||| || ||||||||| |
Sbjct 3715 TACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCA 3656
Query 70903 TAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTG 70962
||| |||| | || | || || || | || |||||||| || || || ||||| ||
Sbjct 3655 TAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCTA 3596
Query 70963 TCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCG 71021
|| || ||||| | |||| || || ||| ||| ||||| | ||||| || || ||
Sbjct 3595 TCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATCT 3536
Query 71022 CTTAATATCTTCTGGAAGGTTTGTA--TTCT-GAATGGATCCACCATCTGCA-ATAATCC 71077
|||| | |||| || | ||| | |||| | || |||||| | || | |||||
Sbjct 3535 CTTATT-TCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGT-TGTATATAATAA 3478
Query 71078 TATTTTTGATCTCTTCATTCCATAATTTTCTCTCG-GTTAAAACTCTAAGGAGATGAGGA 71136
|||||| || ||||||| |||||| | |||| || ||| | | || |||||| |
Sbjct 3477 GATTTTTCATATCTTCATCCCATAAATCAG-CTCGAGTCAAATCAGTCAGAAGATGATGG 3419
Query 71137 TTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGT 71196
|| ||||| ||||||||||||| || ||||| | ||||||||| ||| | |||
Sbjct 3418 TTCACTACAGGAAATTCTCCAGATAAAACTCTTCTTTGGTAAATATTTGATGTAAATGGT 3359
Query 71197 TCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACC 71256
|| | || ||| | || || | |||||| ||||| || ||||||||||||||||| | |
Sbjct 3358 TCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGCTATC 3299
Query 71257 AATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAA 71316
|||||| ||| | | ||||||| | || || ||||| || |||| | ||||
Sbjct 3298 AATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCCCAGTCCCAA 3239
Query 71317 AGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGAT 71376
|| || | || || || | ||||| |
Sbjct 3238 AGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTAGCTGGACTT 3179
Query 71377 CCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCT 71436
||| |||||| ||||| ||||||||||| |||| ||||||||| || ||||||||
Sbjct 3178 CCTTGATATGTGCTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCA 3119
Query 71437 CCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAAT 71496
||||||||||| ||||| || || | | ||| || | ||||| | || || |
Sbjct 3118 CCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAA 3059
Query 71497 GGATAATTTAAGAGA-ATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCT 71555
|| || | | | | | ||| | ||||| | || ||||| |||||||||||||| |
Sbjct 3058 GG-TATTCTCATCAACACAAATGTATCTGCCATACCCTGAACACCAATACCGATAGGACG 3000
Query 71556 GTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 71615
||| ||| |||| ||| ||| ||||| || | ||||||| | |||| ||| || | |||
Sbjct 2999 GTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTT 2940
Query 71616 ATTGAGATTTCTGACTATTACTTTGACC-ACATCCTTTAGTTTGAGAAAATCAAATCTCC 71674
|| | |||| ||| | | | | | | || |||| ||| |||| |||||
Sbjct 2939 GTTTAAATTT-TGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAACTAAATCGAT 2881
Query 71675 CATCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAG 71734
|| | ||||||| ||| | || | || || || || || || || || ||||
Sbjct 2880 TATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCAT--- 2824
Query 71735 CATCGGCA---TATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 71791
| || | | ||||| | || |||||||||||||| ||||| || || || || | ||
Sbjct 2823 CTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGAT 2764
Query 71792 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTT 71851
||| ||||||||||||| |||| || ||||||||||| | ||| | || |||||||| |
Sbjct 2763 TTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCT 2704
Query 71852 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATC 71911
| | |||| ||||||||| | ||||| | || |||| | | | || | | |
Sbjct 2703 CCACTTGAGCTTCTATAATAGACTTCCATAACTCTTGAGCTCTGACTCGTTTTATAAACC 2644
Query 71912 TCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTA 71971
|||||| ||| |||| | ||||| |||||| || ||||| || | | |
Sbjct 2643 GTTTTTCTTCTTCATATTTGGCATATAGGGCTTCGAATTCCTCTCCGTAACAGTCAGCGA 2584
Query 71972 ATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCA 72031
|||||||| |||| |||||||| | ||| ||| |||| | | ||| | |||||
Sbjct 2583 GGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTTCTACCCTTTTCA 2524
Query 72032 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 72091
|||| ||||| || ||||| | ||| ||| || ||||| | ||| || || || |
Sbjct 2523 TAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTAC 2464
Query 72092 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 72151
|||| |||||||| | ||| | |||| | | || || | |||||| || || ||||| |
Sbjct 2463 CTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAA 2404
Query 72152 TGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211
| || | | || || ||||||||||| || ||||||| ||||| || || || || |
Sbjct 2403 TTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGT 2344
Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271
| |||||||||||||| | | |||||| || | ||||| || || | ||||| |
Sbjct 2343 ACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACC 2284
Query 72272 CACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
| ||| | ||| | || || || |||||| || || || |||||| |||||
Sbjct 2283 CCTGGGCTCTAATGCAATGTGTAT--GTAAACCTATGCCACCGGCAGATTTAGAAATTAA 2226
Query 72330 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT 72380
||| ||| ||||||| ||||| | || || || || ||||| || ||||
Sbjct 2225 TGCACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCAT 2175
Score = 96.9 bits (106), Expect = 5e-15
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Minus
Query 72561 CTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 72620
||| || ||||| |||||||| || ||| |||||||||||||||||||||||||||||||
Sbjct 1678 CTTATTGTTTATCTTCAACAAATATGATCTTTCCAAAGTTTTAAAACCAAAATAGTTGTA 1619
Query 72621 TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATTT 72671
| ||| |||| || |||| ||| | || | | ||| ||||| | |||
Sbjct 1618 TTTAAAATCTCTATCATAAACAATGGCAGAGTCTAATTTGTCCTTGTTTTT 1568
Score = 91.5 bits (100), Expect = 2e-13
Identities = 104/140 (74%), Gaps = 0/140 (0%)
Strand=Plus/Minus
Query 72772 ttttttgtttCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCT 72831
|| || || || || |||| ||| |||| ||||||||||| || | ||||||||||||
Sbjct 1022 TTCTTGGTGTCTTTATGTAAATTGGATATTGCTATTCTGGCAGCCAAAATGGCATAATCA 963
Query 72832 GGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTT 72891
||||| | ||| || ||| ||||| ||||| || || ||| | || | || | |||
Sbjct 962 GGATGATCTGTGGTCTTAGTAGCTGCAATTTCAGCAGCTAGATTATCAAGCTCAGCAGTT 903
Query 72892 GTTACTCCATTATATATTCC 72911
||||| ||| |||||| ||
Sbjct 902 GTTACACCAGAATATATGCC 883
>seq197295
Length=1118
Score = 100 bits (110), Expect = 4e-16
Identities = 79/95 (83%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 42551 TTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTC 42610
||||||| |||||||||||| | |||||||| |||||||| || ||||||||||| | |
Sbjct 393 TTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGC 334
Query 42611 CAGATATCATGATATTGAATTGGGAAAATAACAAA 42645
|| || || ||||||| |||||||| ||||| ||
Sbjct 333 CATATGTCGGGATATTGGATTGGGAATATAACGAA 299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 668431371448240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |