Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq218964 143 2e-29
seq117972 127 1e-24
seq153336 111 1e-19
>seq218964
Length=932
Score = 143 bits (158), Expect = 2e-29
Identities = 160/210 (76%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| || || |||||||| |||||||| || ||| | | ||||||| |||||
Sbjct 842 TGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCCAATTGC 783
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279
|| |||||| | |||||||||||||| || ||||| ||||| ||||| ||||||
Sbjct 782 TTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTC 723
Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339
||| |||||| |||| || || ||| | ||| || || || |||||||||||||| ||
Sbjct 722 GCT-TTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGT 664
Query 15340 CAGAGTTTTTACAAAAATTTGCATATTTGA 15369
|| ||||| || ||||| ||||| |||||
Sbjct 663 GAGTGTTTTCACGAAAATCTGCAT-TTTGA 635
>seq117972
Length=685
Score = 127 bits (140), Expect = 1e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196
|||||||| || | | |||||||| | || || |||||||| |||||||| ||
Sbjct 274 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 333
Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256
|| | | | ||||| ||||| ||||| ||| | || | ||||||||| || |||
Sbjct 334 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 393
Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316
|| ||||||||||| ||||| ||||||| |||| || || || ||| ||
Sbjct 394 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 453
Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364
||||| ||||| ||||| || || || ||||| |||||||||||||||
Sbjct 454 TCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCATA 501
Score = 107 bits (118), Expect = 1e-18
Identities = 153/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| || |||||||| || || |||||||| |||||||||||| ||| | | | |||
Sbjct 61 AATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCT 120
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| ||||| || ||||| | || | || || || || ||| || || ||||||||
Sbjct 121 TCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 180
Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
||||| ||| |||||| |||| || ||||| ||| || || | ||||||||
Sbjct 181 TGGATTTTAGCT-TTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGT 239
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
|| || || || ||||| |||||||| |||||
Sbjct 240 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
>seq153336
Length=250
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211
|| ||||| || | || || || || || ||||| || || || | | | | |||
Sbjct 21 AACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCT 80
Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271
|| | ||| || || ||| | ||||| | ||||||||| ||||| ||||| |||||
Sbjct 81 TCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCT 140
Query 15272 CAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330
||| ||||| ||| ||| |||| || ||||| | ||| || ||||| ||||| ||
Sbjct 141 TGAATCTTTGC-CTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGT 199
Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363
||| || || || ||||||||||||||||||||
Sbjct 200 TTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 360754456520334
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |