Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq218964 143 2e-29 seq117972 127 1e-24 seq153336 111 1e-19 >seq218964 Length=932 Score = 143 bits (158), Expect = 2e-29 Identities = 160/210 (76%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||| || || |||||||| |||||||| || ||| | | ||||||| ||||| Sbjct 842 TGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCCAATTGC 783 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT- 15279 || |||||| | |||||||||||||| || ||||| ||||| ||||| |||||| Sbjct 782 TTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTC 723 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 ||| |||||| |||| || || ||| | ||| || || || |||||||||||||| || Sbjct 722 GCT-TTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGT 664 Query 15340 CAGAGTTTTTACAAAAATTTGCATATTTGA 15369 || ||||| || ||||| ||||| ||||| Sbjct 663 GAGTGTTTTCACGAAAATCTGCAT-TTTGA 635 >seq117972 Length=685 Score = 127 bits (140), Expect = 1e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||| || | | |||||||| | || || |||||||| |||||||| || Sbjct 274 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 333 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || | | | ||||| ||||| ||||| ||| | || | ||||||||| || ||| Sbjct 334 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 393 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||||| ||||||| |||| || || || ||| || Sbjct 394 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 453 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 ||||| ||||| ||||| || || || ||||| ||||||||||||||| Sbjct 454 TCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCATA 501 Score = 107 bits (118), Expect = 1e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || |||||||| || || |||||||| |||||||||||| ||| | | | ||| Sbjct 61 AATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCT 120 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || ||||| || ||||| | || | || || || || ||| || || |||||||| Sbjct 121 TCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 180 Query 15272 CAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 ||||| ||| |||||| |||| || ||||| ||| || || | |||||||| Sbjct 181 TGGATTTTAGCT-TTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGT 239 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || || ||||| |||||||| ||||| Sbjct 240 CTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 >seq153336 Length=250 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || ||||| || | || || || || || ||||| || || || | | | | ||| Sbjct 21 AACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCT 80 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || | ||| || || ||| | ||||| | ||||||||| ||||| ||||| ||||| Sbjct 81 TCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCT 140 Query 15272 CAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 ||| ||||| ||| ||| |||| || ||||| | ||| || ||||| ||||| || Sbjct 141 TGAATCTTTGC-CTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGT 199 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 ||| || || || |||||||||||||||||||| Sbjct 200 TTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360754456520334