Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 206 2e-48
seq2512 102 7e-17
seq117972 91.5 1e-13
seq218964 82.4 6e-11
>seq21365
Length=2821
Score = 206 bits (228), Expect = 2e-48
Identities = 742/1135 (65%), Gaps = 43/1135 (4%)
Strand=Plus/Plus
Query 100112 TTCATAGCATTTAACAAGTCGCCGTTGTCGGCGTCGATTTCCCAAGCGAATAACCCGCCC 100171
||||| ||||| | | || |||||||||||||||||||||||||| || | || ||
Sbjct 144 TTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCACCT 203
Query 100172 AATCCGTTTTGATCT-ACATAACTATTTTTTGCTAATACAGAATCGA-CACTGTCAAAAG 100229
| | ||| | ||| ||||| || ||| | | || || || | || ||||| | |
Sbjct 204 AGTTTGTTATT-TCTCACATATTTACCCTTTTCAATAACTGA-TCTAGCATTGTCATAGG 261
Query 100230 AGATTAAATCGCCCTTGTCTTTGT-TAAAAACGTAAGCCGCTTTAGCGAC-----CG-AA 100282
| | || || | | | || | || || |||| |||| ||||| || ||
Sbjct 262 TTACAAGGTCTCCAGT-TGATGGTCTGAAGACATAAGGAGCTTGGGCGACATTGTCGTAA 320
Query 100283 TCAAATTTGTAAATGTACTTGTTCAATT-CGTTTTCAATTTGGCGATAATCGACAACGCC 100341
| ||||| | || |||| ||||| | || |||| | | ||||| || || ||
Sbjct 321 TGAAATTCCCACTTGC-CTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCC 379
Query 100342 GTCTTCCCAAGTGCCGGTCACGGGCCCGGCAGCTGTGCCTGTGAA---ATAGTTGTCACC 100398
||||| |||||| || | || || || | ||| |||||||||| | |||||| |
Sbjct 380 GTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTC 439
Query 100399 GTCATAGCCCGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACGCCCACAATAATTTT 100458
|| || | ||||| |||||||| || || ||||||||||| || | | ||| ||
Sbjct 440 GTAAT---CATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTT 496
Query 100459 GCGCGGGTCCACGCCCTGGTTCGTGAGCAATTTCACGGCGTGATCCGTGTTGTACAGCTC 100518
|| | ||| ||||| | | |||| || || || | |||| ||
Sbjct 497 CTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTC 556
Query 100519 GTTCGGGTTCCAACTCGGCGCGTAGAGAGTGGTTTGGTAGCCCAA----ATCGGTGTTTG 100574
|| || ||||| |||||||| | | ||||| | | |||| ||| ||||
Sbjct 557 CTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGAT-GTCCAAGAGTATCA---TTTG 612
Query 100575 ACCAGGCGCCTTTAAAATCGTAGCTCAT-AAGAAATATTTTATCGAGAAGCTTTTGCGCA 100633
||||||| || || || || || ||||| |||||| || | ||| | | ||||| ||
Sbjct 613 ACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAA-ATATGATCCATATAATTTTGAGCC 671
Query 100634 ACGTCGTACTGTACCACAGCAATTTTGTCATAGCCGGAACTGATTGCGCTTGTCAACTCG 100693
| |||| | || || ||||| || | || || || || || ||||| |||
Sbjct 672 TTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCG 731
Query 100694 TACGTTTTGCCCGTTTGCAGTTGT-AGCTGGTCCAGCATCGCGCGCAATTCCTTCAGTAA 100752
|| | ||||| | | || || |||| || |||||| | || ||||| |||| ||
Sbjct 732 TATTTCTTGCCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAA 790
Query 100753 AATGTTGTACGTGTCGGCGTCGCGCTCCCCGTTGCCAAGAGTC-GGGTTGGCGCCTTTGC 100811
| | || || | || || | | || || ||| ||||| || ||||| |
Sbjct 791 ACTTACATAACAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTAGCACCTTTAC 846
Query 100812 CGCCCGGAAACTCCCAGTCAATGTCCACGCCGTCAAAAAACTTCCACACCTGCAAAAATT 100871
| || ||||||||||| || || || || || || || || ||||| | | ||| |
Sbjct 847 CACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACT 906
Query 100872 CCTTGACCGAGTCCACAAACACGCGCCGTTTTTCCGCATCGTGCATGAAATAGAAC---G 100928
|||| || || | |||||| || | ||| | | || | ||| |||| |
Sbjct 907 CCTTTACTGACTGCACAAAT---CGTGTTCTTTTAGATTTGTCAACTAAAAAGAAGAAAG 963
Query 100929 GGTCGGACAACGTCCAGCCGCCGATGGACGGCAGAATTTTGAGGTGCGGATTGGCCAGCT 100988
| |||| | |||||| || || || || || ||||| || | | || ||| | |
Sbjct 964 GATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTT 1023
Query 100989 TGGCCGCCATTAGCTGACCGAAATTGCCCTTGTACGGCTCGTTCCATGCGGACACGCCCT 101048
| | ||||| || || || ||||| ||||| ||||||||||||| |||| || |
Sbjct 1024 TTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTT 1083
Query 101049 TTTGCGGTTTTTGTATTGCGGCCCAGGGATCGTGAATGGCGACTTTGAAATCTGAACGAC 101108
|||| |||||||||| ||| ||||| |||||||| || | ||||||||| || ||| |
Sbjct 1084 TTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGC 1143
Query 101109 CCTTGCAGGAGCGCTGCAGCGCTTCAAAACTGCCGGGAATGGTTTTGAGGGCGTCGTTGA 101168
| | ||||| || ||||| |||| |||||||| || ||| | | || || |
Sbjct 1144 CGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTA 1203
Query 101169 GGCCGTCGCCGCCGCAAATGGGTATGAACCCGTACAACAGATGCGAGAGATTGGG 101223
|||||| |||||||||||||| || || || || | || ||| | ||||| ||
Sbjct 1204 TGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGG 1258
>seq2512
Length=3386
Score = 102 bits (112), Expect = 7e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 25230 CGCAAAAACGGGCATTGCGGCGCCCATTTTTGATGATCGCGAGCCGGGTCGTCGCCCGCC 25289
|||| || ||||| || |||||||| ||| || || ||| || |||||||||||
Sbjct 1366 CGCAGGAAGGGGCACTGGGGCGCCCACCGTTGGTGGTCCTTAGCGGGATCGTCGCCCGCG 1425
Query 25290 TCCCAGCGCATAATCTCCACTTTGCAAAACGCGCAGCGCACTTCGTCGCCGCGTCCCAAG 25349
|||| |||||| || ||||| |||||||||||||| ||||| || ||||| |||| |
Sbjct 1426 ACCCATTTCATAATTTCTACTTTACAAAACGCGCAGCGTACTTCATCACCGCGGCCCAGG 1485
Query 25350 TAGTAGAACCCATT 25363
|| ||||| || ||
Sbjct 1486 TAATAGAAGCCGTT 1499
>seq117972
Length=685
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904
||||| || |||||||| |||||||| | | || | || |||| || |||||
Sbjct 76 GTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCTTCCAATTGCTTACCA 135
Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964
||| | ||||| | ||||||||| || | |||||||||||| ||||| ||||
Sbjct 136 GCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTT 195
Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024
|| | | | |||||| || ||| ||| | |||||||| || || |||| |||
Sbjct 196 ACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTT 255
Query 19025 TTGACAAAAATTTGCATT 19042
|| |||||||| ||||||
Sbjct 256 TTAACAAAAATCTGCATT 273
>seq218964
Length=932
Score = 82.4 bits (90), Expect = 6e-11
Identities = 157/230 (68%), Gaps = 1/230 (0%)
Strand=Plus/Minus
Query 18830 AACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCC 18889
|| |||| ||| | ||||| || |||||||| ||||| || | | || | ||||
Sbjct 851 AATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCT 792
Query 18890 TCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCG 18949
|||| || || || || |||| | | || ||||| || | ||| || |||||
Sbjct 791 TCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCT 732
Query 18950 GCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTT 19009
||||||| |||||| | | | ||| ||| ||| || ||| | |||||||||
Sbjct 731 TGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTT 672
Query 19010 TTACCTGTTAAAGTTTTGACAAAAATTTGCATTTT-AAATCTCTTATAAA 19058
||||| || | ||||| || ||||| |||||||| | |||| | | |||
Sbjct 671 TTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGATATCTGTAACAAA 622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412941950150956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |