Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_005137.2
Length=131160
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 251 6e-62
seq117972 127 2e-24
seq218964 104 2e-17
>seq21365
Length=2821
Score = 251 bits (278), Expect = 6e-62
Identities = 639/963 (66%), Gaps = 17/963 (2%)
Strand=Plus/Plus
Query 101018 TAATCGACAACGCCGTCTTCCCAAGTACCGGTCACGGGCCCGGCAGCTGTGCCTGTGAA- 101076
||||| || || ||||||| ||||||||| | || || || | ||| ||||||||||
Sbjct 366 TAATCAACCACTCCGTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAG 425
Query 101077 --ATAGTTGTCACCGTCATAGCCTGCCACGCCTGTCCAACCGCGGCCGTACATGGCAACG 101134
| |||||| ||| || | || ||||| |||||||| || || |||||||||||
Sbjct 426 GGAATGTTGTCTTCGTAAT--CATGA-ACGCCAGTCCAACCACGACCATACATGGCAACA 482
Query 101135 CCCACAATAATTTTGCGCGGGTCTACGCCCTGGTTCGTGAGCGATTTAACAGCGTAATCC 101194
|| | | ||| || || | || ||||| | | |||| || || | ||
Sbjct 483 CCTAATACAATCTTCTTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCA 542
Query 101195 GTGTTGTACAGCTCGTTTGGGTTCCAACTCGGCGCGTAGAGTGTAGTTTGATAGCCCAGA 101254
| |||| || || || ||||| |||||||| | || ||||||| || |||
Sbjct 543 GATGTGTAAGTTTCCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGA 602
Query 101255 TCGATGTTTGACCACGCGCCTTTGAAATCGTAGCTCATGAGAAATATTTTATCGAGGAAC 101314
|||||||| || || ||||| || || ||||| | || || | ||| | |
Sbjct 603 GTATCATTTGACCAGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAA 662
Query 101315 TTTTGCGCAAGATCGTATTTTACTACAGCAATTTTGTCGTGACCCGAACTAATTGCACTT 101374
||||| || |||| | || || ||||| || || || ||||| |||
Sbjct 663 TTTTGAGCCTTGCCGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAA 722
Query 101375 GTTAATTCGTATGTTTTGCCCGTTTGCAGTTGCAA-CTCGTCCAGCATTGCGCGCAATTC 101433
|| ||||||||| | ||||| | | || || | ||| || ||||| | || |||||
Sbjct 723 GTCAATTCGTATTTCTTGCCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAATTC 781
Query 101434 TTTCAGTAAAATGTTGTACGTGTCAGCGTCGCGTTCTTTGTTGCCGAGTGTTGGGTTGGC 101493
||||| ||| | || ||| | || |||| | | ||||| ||||| ||
Sbjct 782 TTTCATCAAACTTACATAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGC 838
Query 101494 GCCTTTACCACCCGGAAACTCCCAATCGATGTCTACCCCGTCAAAAAATTTCCAAACCTG 101553
||||||||||| ||||||||||||||||| ||||| || || || |||||||| |
Sbjct 839 ACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAG 898
Query 101554 CAAAAATTCTTTGACAGAATCCACAAACACACGCCGTTTTATCGCGTCGTGCA-TATAAT 101612
| ||| || || || || | |||||| || | || | | | || | || ||
Sbjct 899 GAGAAACTCCTTTACTGACTGCACAAAT---CGTGTTCTTTTAGATTTGTCAACTAAAAA 955
Query 101613 --AGAACGGGTCGGACAATGTCCAGCCGCCGATGGACGGCAAAATTTTAAGGTGTGGATT 101670
|||| || |||| | ||||| || || || || || | ||| || | | ||
Sbjct 956 GAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCG 1015
Query 101671 GGCCAATTTGGCCGCCATTAGCTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGA 101730
||| ||| | ||||| || ||||||||||||||||||||||||||||| | |||
Sbjct 1016 GGCTTGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGA 1075
Query 101731 TACACCTTTCTGCGGTTTTTGTATTGCGGCCCAAGGATCGTGGATAGCAACTTTAAAATC 101790
| ||||| || |||||||||| ||| ||||| ||||||||||| | ||||| || ||
Sbjct 1076 CAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTC 1135
Query 101791 TGAACGGCCCTGGCAAGAACGTTGCAACGCTTCAAAACTACCGGGTATGGTTTTGAGGGC 101850
|||||| || || ||||||| |||| ||||| || || ||| | |
Sbjct 1136 CTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCT 1195
Query 101851 GTCGTTAAGGCCATCGCCGCCACAAATGGGTATGAACCCGTACAACAAATGTGAGAGGTT 101910
|| || | ||| || ||||| |||||||| || || || || | |||||| | || ||
Sbjct 1196 ATCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATT 1255
Query 101911 GGGCAGCGGCACTTTGTCCACCGGAAAGTTGCGACCATACACGCCCCATTCTACAAAATA 101970
|| | || | ||||| || || || | | || || ||||||||||| || ||
Sbjct 1256 AGGTATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTA 1315
Query 101971 CGC 101973
||
Sbjct 1316 GGC 1318
>seq117972
Length=685
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| || || | | ||| |||||||| || |||||||||||||| ||||||||||||
Sbjct 44 TTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGG 103
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| | |||||||||||| || || ||| | ||||| | ||| ||||| |
Sbjct 104 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTG 163
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | ||| |||||||| ||||| ||| || | ||| || ||| ||||||
Sbjct 164 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 223
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209
||||| |||||||| || || || | ||||| |||||||| ||||||
Sbjct 224 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273
Score = 100 bits (110), Expect = 2e-16
Identities = 162/231 (70%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| |||| ||| | | || ||||| | |||||||||||||| |||||||| ||
Sbjct 272 TTCCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG 331
Query 20040 CCATAGTTTTAGA--ATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGAC 20097
| ||| | || |||||||||||| |||||||| ||||||| | ||||||||
Sbjct 332 --AAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGG 389
Query 20098 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTC 20157
|| | |||||||||||| ||||| || || | ||| | || | |||
Sbjct 390 AGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTC 449
Query 20158 CGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208
||| | ||||| |||||||| || | ||||| ||||||||||||||
Sbjct 450 AACTTCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/122 (76%), Gaps = 4/122 (3%)
Strand=Plus/Plus
Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGA--A 20053
||| || |||||||| |||||||| ||||| || || ||||| ||||| | | |
Sbjct 516 CAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG--ATAGTGTACGGCCA 573
Query 20054 TCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTG 20113
||||||| |||||| || ||| |||| ||||||||||| || ||| | |||||||||
Sbjct 574 TCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTG 633
Query 20114 TC 20115
||
Sbjct 634 TC 635
>seq218964
Length=932
Score = 104 bits (114), Expect = 2e-17
Identities = 162/232 (70%), Gaps = 0/232 (0%)
Strand=Plus/Minus
Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039
|||| || |||| | ||| |||| || || |||||||||||||| |||||||| ||
Sbjct 868 TTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTG 809
Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099
| ||| ||||||||||| || || || |||| | | |||||||| |
Sbjct 808 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 749
Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159
| | |||||| ||||| |||||| ||| || | ||| || ||| ||||||
Sbjct 748 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689
Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211
||||| ||||||||||| || || | ||||| || ||||| ||||||||
Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 417936624463494
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |