Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq218964 174 4e-38
seq153336 174 4e-38
seq117972 172 1e-37
seq131538 143 6e-29
seq149208 89.7 1e-12
>seq218964
Length=932
Score = 174 bits (192), Expect = 4e-38
Identities = 179/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || | ||| | | ||| || || | ||||||||||| ||||| || |||||
Sbjct 869 ATTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCT 810
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | |||||||| | ||| |||||||| ||||| | | |||||||| |||
Sbjct 809 GAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 750
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| || |||||||||||||| | || ||| ||||||
Sbjct 749 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 690
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563
|| || | ||||| || ||||| || |||||||| || || ||||||||||||
Sbjct 689 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTG 636
>seq153336
Length=250
Score = 174 bits (192), Expect = 4e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| || ||||| | | |||| || || |||||||| ||||| || ||||||||
Sbjct 3 ATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCC 62
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | || ||||| ||||| ||||| || ||||| | || ||||| || |||
Sbjct 63 GACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGA 122
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||||||||| || |||||||| | ||||| || |||
Sbjct 123 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCC 182
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| |||| |||||||| || ||||| |||||||||||||| || ||||||
Sbjct 183 ACTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCATT 233
>seq117972
Length=685
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||||| | |||||||| ||| || ||||||||||| || || || ||||||
Sbjct 271 ATTCCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCA 330
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| | ||| || || || ||||| || | |||||||| |||
Sbjct 331 GAAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGA 390
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || || || || || ||||||||||| | || || | |||
Sbjct 391 GGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCA 450
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||| ||||| || || |||||||||||||| ||||| || |||||
Sbjct 451 ACTTCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500
Score = 161 bits (178), Expect = 2e-34
Identities = 136/167 (81%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409
||||| ||||| |||||||| || ||||||||||| |||||||| || | || |||||
Sbjct 519 TACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCCATCTTC 578
Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
|||||||||||||||||||| ||||||||||| || || || || |||||||| || ||
Sbjct 579 CAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTTGTCTTG 638
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTA 104516
|||||||| || |||||||| | || || |||||||||||||
Sbjct 639 GATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTCTACCTCTA 685
Score = 159 bits (176), Expect = 8e-34
Identities = 162/211 (77%), Gaps = 0/211 (0%)
Strand=Plus/Plus
Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409
||| | ||| | ||||||||||| ||||| || || || || ||||| | ||| |||||
Sbjct 63 TACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCTTC 122
Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTG 104469
| ||| || |||||||| || || | ||| |||||||| || || || ||||| || ||
Sbjct 123 CAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTG 182
Query 104470 AATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTT 104529
|| || |||||||||||||| | ||||| ||||| || || || ||||| |||||
Sbjct 183 GATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTT 242
Query 104530 ACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||| || ||||| ||||| |||||||||
Sbjct 243 TCCAGTTAGGGTTTTAACAAAAATCTGCATT 273
>seq131538
Length=717
Score = 143 bits (158), Expect = 6e-29
Identities = 126/157 (80%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392
|| ||||| || || || || || || | |||||||||||||||||||| || ||||||
Sbjct 157 CCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGAT 98
Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452
| |||| || ||||| ||||| || || |||||||| | ||||||||| || |||||
Sbjct 97 AATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGA 38
Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTT 104489
|| |||||||| |||||||| ||||| || |||||||
Sbjct 37 ATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATTTT 1
>seq149208
Length=369
Score = 89.7 bits (98), Expect = 1e-12
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||||||| | | ||| | || || || || |||||||||||||| ||||||
Sbjct 124 ATACCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCA 65
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| ||||| | ||| || || || || || ||||| |||||||| | |||||||| ||
Sbjct 64 GAGAGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGG 5
Query 104450 GG 104451
||
Sbjct 4 GG 3
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1146636743701992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |