Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq39946 95.1 1e-14 seq191159 91.5 2e-13 >seq39946 Length=3916 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 19362 AAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATTTATC 19421 |||| || ||||||||||||||| | || ||||||||| |||||||| || |||| Sbjct 2862 AAATTGGGGATAAGTTTGCTTCTCGTCATGGTCAAAAAGGAACATGTGGAATCCAATATC 2921 Query 19422 GTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAACCCAC 19481 | |||||||||||||| ||||| || || || ||| ||| | |||||||| || | Sbjct 2922 GACAAGAAGATATGCCGTTTACATGTGAGGGCTTAACGCCAGATATCATTATTAATCCCC 2981 Query 19482 ATGCTTTTCCAAGTCGAATGAC 19503 |||| | || ||| ||||| Sbjct 2982 ATGCCATCCCTTCTCGTATGAC 3003 >seq191159 Length=871 Score = 91.5 bits (100), Expect = 2e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 7118 TTATAATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATAT 7177 ||||||| | |||| |||||| || || || ||| ||||||| || | || | || Sbjct 405 TTATAATGTTATGTATTTGATCAATTCCTTGTCCTGCATAATTGGTTTTCGCATCAACAT 346 Query 7178 AATTAGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 | ||||||||| ||||||||||||||| ||||||| |||||| | ||||||| Sbjct 345 ATTTAGCTCCACTATGTCTCCATTGAAAGCCATAAACAGGACCAAGATCACCT 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593467850138400