Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq104 129 9e-26 seq4222 116 6e-22 >seq104 Length=3055 Score = 129 bits (142), Expect = 9e-26 Identities = 191/271 (70%), Gaps = 0/271 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| | | | || || ||||||||||| || ||||| ||||| || ||| Sbjct 2922 GCGAAGCGTCACAGGAAAGTGCTGCGCGATAACATCCAGGGCATCACGAAGCCGGCGATC 2863 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || || | || || ||||| ||| | || || || | || || |||| | Sbjct 2862 CGTCGTCTCGCCCGCAGGGGCGGCGTCAAACGTATATCCGGCCTGATATACGAGGAGACT 2803 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 || | || ||||| | |||||| ||| ||| |||| || || || || || ||| Sbjct 2802 CGCGGAGTGCTGAAGGTGTTCCTCGAGAACGTGATCCGCGACGCCGTCACGTACACGGAG 2743 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | ||||| |||||| ||||||| |||| || || |||| || || || Sbjct 2742 CACGCCAAGAGGAAGACCGTCACCGCCATGGACGTCGTGTACGCCCTGAAGCGGCAGGGG 2683 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 || | | || || || || |||||| || Sbjct 2682 CGCACTCTGTACGGCTTCGGCGGTTAATATT 2652 >seq4222 Length=739 Score = 116 bits (128), Expect = 6e-22 Identities = 183/262 (70%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||| ||||| | | | || | || ||||||||||| |||||||| |||||||| Sbjct 184 CGCTAAACGTCACAGAAAAGTACTCAGGGACAACATCCAAGGCATCACCAAACCAGCTAT 243 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 | | |||| | ||||| ||||| || || | || || || | || ||||| | Sbjct 244 AAGAAGATTGGCGAGACGTGGCGGAGTTAAACGCATTTCCGGTTTAATTTACGAAGAAAC 303 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | ||||| ||||| || || | | || || ||||| | ||||| || Sbjct 304 GCGCGGAGTTTTAAAGATTTTTCTAGAAAATGTCATTAGAGATGCCGTGACTTATACTGA 363 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||||||| | || ||||| || | |||||||| || || ||||||||| | ||||| Sbjct 364 ACACGCTAAAAGGAAAACTGTTACAGCAATGGATATAGTTTACGCATTGAAAAGACAAGG 423 Query 16672 CCGTAAGATTTATGGTTTTGGA 16693 ||| | | | ||||| |||||| Sbjct 424 CCGGACGTTGTATGGATTTGGA 445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78780085472382