Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_006641.1 Length=15959 Score E Sequences producing significant alignments: (Bits) Value seq8208 82.4 8e-12 seq8209 80.6 3e-11 >seq8208 Length=3737 Score = 82.4 bits (90), Expect = 8e-12 Identities = 144/208 (69%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 685 CACTCAAAGAAAACGTGCTCTGCATCTTCAT--TGACTCCTGGGCAGGATGGGCACTCTG 742 || |||||||| || ||||| |||| ||| | | || ||| || ||||| |||| Sbjct 2393 CATTCAAAGAATACATGCTCAGCATTTTCGTGCTTACCACTGT--AGCTGGGGCATTCTG 2336 Query 743 GGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACA 802 | |||| || ||||| ||||||| | || | ||| | || ||||| || || | || Sbjct 2335 GAGAATCCTCGTGCTTAAAGCGGTGTAAGTAATCTCGGTAGCAACCGTGACCAGAAAGCA 2276 Query 803 TCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTG 862 | || || ||||| || || |||||| || | ||||| ||| | ||| | | Sbjct 2275 TTTGGGTGAGATAGTAATTTGTCTCACCATGCTTGCGGTTGTACCATGGTTCGATATTCG 2216 Query 863 GTATGAGACGATGCGTCCATCTACCATT 890 |||||||||||| |||||||| || || Sbjct 2215 GTATGAGACGATAGGTCCATCTTCCTTT 2188 >seq8209 Length=647 Score = 80.6 bits (88), Expect = 3e-11 Identities = 146/212 (69%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 681 TGAGCACTCAAAGAAAACGTGCTCTGCATCTTCAT--TGACTCCTGGGCAGGATGGGCAC 738 |||| | |||||||| || ||||| || | ||| | | ||| ||| ||| ||||| Sbjct 162 TGAGTATTCAAAGAATACATGCTCAGCGTTTTCGTGCTTACTACTG--CAGCTGGGGCAT 219 Query 739 TCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGAT 798 | |||||||| || || || | ||||| | || | ||| | || ||||| || || Sbjct 220 TATGGGGAATCCTCGTGTTTAAAACGGTGTAAGTAATCTCGGTAGCAACCGTGACCAGAA 279 Query 799 AACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATC 858 | ||| || || || || || || |||||| || | ||||| |||| | ||| Sbjct 280 AGCATTTGGGTGAGGTAGTAATTTGTCTCACCATGCTTGCGGTTGTGCCATGGTTCGATA 339 Query 859 CTTGGTATGAGACGATGCGTCCATCTACCATT 890 | ||||||||||||| |||||||| || || Sbjct 340 TTCGGTATGAGACGATAGGTCCATCTTCCTTT 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 50760249317764