Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_006641.1
Length=15959
Score E
Sequences producing significant alignments: (Bits) Value
seq8208 82.4 8e-12
seq8209 80.6 3e-11
>seq8208
Length=3737
Score = 82.4 bits (90), Expect = 8e-12
Identities = 144/208 (69%), Gaps = 4/208 (2%)
Strand=Plus/Minus
Query 685 CACTCAAAGAAAACGTGCTCTGCATCTTCAT--TGACTCCTGGGCAGGATGGGCACTCTG 742
|| |||||||| || ||||| |||| ||| | | || ||| || ||||| ||||
Sbjct 2393 CATTCAAAGAATACATGCTCAGCATTTTCGTGCTTACCACTGT--AGCTGGGGCATTCTG 2336
Query 743 GGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGATAACA 802
| |||| || ||||| ||||||| | || | ||| | || ||||| || || | ||
Sbjct 2335 GAGAATCCTCGTGCTTAAAGCGGTGTAAGTAATCTCGGTAGCAACCGTGACCAGAAAGCA 2276
Query 803 TCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATCCTTG 862
| || || ||||| || || |||||| || | ||||| ||| | ||| | |
Sbjct 2275 TTTGGGTGAGATAGTAATTTGTCTCACCATGCTTGCGGTTGTACCATGGTTCGATATTCG 2216
Query 863 GTATGAGACGATGCGTCCATCTACCATT 890
|||||||||||| |||||||| || ||
Sbjct 2215 GTATGAGACGATAGGTCCATCTTCCTTT 2188
>seq8209
Length=647
Score = 80.6 bits (88), Expect = 3e-11
Identities = 146/212 (69%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 681 TGAGCACTCAAAGAAAACGTGCTCTGCATCTTCAT--TGACTCCTGGGCAGGATGGGCAC 738
|||| | |||||||| || ||||| || | ||| | | ||| ||| ||| |||||
Sbjct 162 TGAGTATTCAAAGAATACATGCTCAGCGTTTTCGTGCTTACTACTG--CAGCTGGGGCAT 219
Query 739 TCTGGGGAATTATCATGCTTGGAGCGGTGGAGATACGCCCGGAAACAGCCGTGTCCTGAT 798
| |||||||| || || || | ||||| | || | ||| | || ||||| || ||
Sbjct 220 TATGGGGAATCCTCGTGTTTAAAACGGTGTAAGTAATCTCGGTAGCAACCGTGACCAGAA 279
Query 799 AACATCTGTGTAAGATAATAGTTGACCTCACCGTGACTCCGGTTTAGCCAAACGTTGATC 858
| ||| || || || || || || |||||| || | ||||| |||| | |||
Sbjct 280 AGCATTTGGGTGAGGTAGTAATTTGTCTCACCATGCTTGCGGTTGTGCCATGGTTCGATA 339
Query 859 CTTGGTATGAGACGATGCGTCCATCTACCATT 890
| ||||||||||||| |||||||| || ||
Sbjct 340 TTCGGTATGAGACGATAGGTCCATCTTCCTTT 371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 50760249317764
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |