Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq213871 111 2e-19 seq228136 89.7 5e-13 >seq213871 Length=423 Score = 111 bits (122), Expect = 2e-19 Identities = 162/220 (74%), Gaps = 7/220 (3%) Strand=Plus/Minus Query 21477 ATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAAC 21536 || |||||| || | || |||| |||||||| || | |||||| || ||||| | Sbjct 374 ATTCAAAATTACTAATCATACCT-CATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATC 316 Query 21537 CGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CCTGAAAAGAAA 21595 ||||||| || |||| ||||| |||||||||||||| ||||| ||| ||||| || || Sbjct 315 CGGGCATCAAGCCTCGTTTTTTCAACCAAAATATTGAAGCAAA-GCTGCCTGAGAAAAAT 257 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAAT-CGTTCACCGTATGTAG-ATTCTTTATCCA 21653 || |||||||| || ||||| || | |||| ||||| || |||| | | |||| | | Sbjct 256 ATTCCCTCAACCGCCGCAAAAGCGA-TAATACGTTCTCCAAATGTGGCAGTCTTGCTGC- 199 Query 21654 ATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACA 21693 ||||| | | ||||| | |||||| | |||||||| Sbjct 198 CGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAATACA 159 >seq228136 Length=1993 Score = 89.7 bits (98), Expect = 5e-13 Identities = 217/323 (67%), Gaps = 8/323 (2%) Strand=Plus/Minus Query 131860 TCCTATGACTCCTGTTAAACCTATGTTGGCTGATGTATGCGAATCTCTAGAAAAAGCAAT 131919 || |||||| || || ||| ||||| || || | ||| |||| | |||| || || Sbjct 766 TCTTATGACCCCAGTATTACCAATGTTAGCAGAAGCTTGCAAATCAGTTGAAATGGCTAT 707 Query 131920 AGATAAATATAAAGATGGAATGTATTCAGAGGTAAAATATGATGGGGAGCGTGTACAAAT 131979 | |||| | | |||| |||| ||| ||| ||||||||||||| || || || ||| | Sbjct 706 GAAAAAATGTCCAAATGGCATGTTTTCTGAGATAAAATATGATGGAGAACGGGTTCAAGT 647 Query 131980 TCATAAAAAAGATAATGTATACAATTATTTTAGTAGAAATTTAAAACCTGTTCTTACTCA 132039 |||||||| | |||| | ||| |||||| | |||||||| || | |||| Sbjct 646 CCATAAAAAGGGAAATGAGTTCAAATATTTTTCCCGTGCCTTAAAACCGGTAATGGCTCA 587 Query 132040 TAAAATTGATGGATTTGATAAACTGTTGA-CTGATGCATTTCCCACAGCAAAAAACTTCA 132098 ||| || | |||| | | | | || | || | |||||||| | || | | || | Sbjct 586 CAAAGTT-AGTCATTTTAAAGATTATTTACCTAAAGCATTTCCTAAAGGAGCTGATTTGA 528 Query 132099 TTTTAGATGCGGAATTAATAATGATAGAT-ACAAAA--TCAAATTCATTTTTACCATTTG 132155 |||| ||||| ||| || | ||| | ||| ||| | ||| || || || |||| Sbjct 527 TTTTGGATGCTGAAGTACTTATGGTTGATGTCAATACTGGAAAACCA---TTGCCTTTTG 471 Query 132156 GTTCATTAGGTATACATaaaaaa 132178 | |||||||||| || ||| || Sbjct 470 GCACATTAGGTATTCACAAACAA 448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529754753139760