Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 123 6e-23
seq54952 89.7 1e-12
>seq5177
Length=4331
Score = 123 bits (136), Expect = 6e-23
Identities = 468/724 (65%), Gaps = 14/724 (2%)
Strand=Plus/Plus
Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651
|||||| | || || ||||| ||| || ||||| |||||| ||| || ||||| ||
Sbjct 2145 CCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTC 2204
Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711
|| || | || | ||||| | ||||| || ||| || || || ||| || ||
Sbjct 2205 GATACTTTAAAACAATGTGCATTAATTTCTAAATCTGCCGGTGGCATAGGTTTAC--ATA 2262
Query 363712 CACAATG--TTCGTGCACAGAACAGTTACATTCGCGGCAC--AGGGGGATACTCGAATGG 363767
|||| || || | || ||| ||| || ||||| | |||| | ||||||||
Sbjct 2263 CACATTGCATTAGAGCCCAGGGGTCTTATATAGCTGGCACTAATGGGGTT--TCGAATGG 2320
Query 363768 GCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGG 363827
|| || || ||| | | |||| |||||||||| || || || || || ||||||
Sbjct 2321 TCTAGTGCCAATGTTGAGAGTGTACAACAATACTGCCAGATATGTAGATCAAGGTGGAAA 2380
Query 363828 AAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTT 363887
|| || || || ||||| || || | |||||| ||||| || || ||||||||
Sbjct 2381 CAAACGTCCCGGTGCATTTGCAATTTACTTAGAGCCTTGGCATGCGGACATATTTGAGTT 2440
Query 363888 TCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGC 363947
| || | || ||||| || || || ||| || | || | || ||||| |||||
Sbjct 2441 CTTAGATTTAAAAAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGC 2500
Query 363948 ACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTT 364007
| ||| | | || | |||||||| | || || | | | ||||| ||| |
Sbjct 2501 TTTATGGATACCAGATCTGTTTATGAAAAGGGTAGAAAAGGATGAAGATTGGAGTCTCAT 2560
Query 364008 TTGCCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTAT 364066
|| || || || ||||| || || | || ||| | || || || | | || ||||
Sbjct 2561 GTGTCCTCATGATTGTCCTGGCCTCGCTGACTGT-TACGGAGAGGAATTCGAAGCCCTAT 2619
Query 364067 ACGAAAAGTATGAATCGGAGGGAAA-GGCTCGTAAGACAATTCCC-GCACAGAAGCTATG 364124
| | || |||||| | || ||| || | ||| || | || || || || ||||
Sbjct 2620 ATGCCAAATATGAA--GAAGAAAAACGGTTTATAAAACGAGTCAGAGCTCAAGAGTTATG 2677
Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTC 364184
| | || || || | || | ||||| || ||||| ||||||||||| || ||| |
Sbjct 2678 GAAGTCTATTATAGAAGCTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGATGC 2737
Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTAC 364244
|||||| | ||| || || | | ||||| || ||| | ||||| || || ||
Sbjct 2738 TTGCAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCAC 2797
Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304
||| || | ||||||| | || || || || || |||||||| || || ||
Sbjct 2798 TGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGC 2857
Query 364305 GCTT 364308
|||
Sbjct 2858 ACTT 2861
>seq54952
Length=6343
Score = 89.7 bits (98), Expect = 1e-12
Identities = 105/142 (74%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 65872 TTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGC 65931
||||| | ||||| ||||||| |||| | || | ||||||| |||| ||||
Sbjct 2049 TTACGGACAGTTCCATCATAATGTACCATAACAGACTCCATAGCCTTTATTAGACGACGC 1990
Query 65932 TGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGAC 65991
|| ||||||||| | | |||||||||||||| ||||||| |||||||||||| || |
Sbjct 1989 TGAATGTAACCAGTTTCAGCAGTTTTTACCGCAGTATCAATGAGACCTTCACGACCTCCC 1930
Query 65992 ATTGCAGAAAAGAAAAACTCAG 66013
|| || || |||||||||
Sbjct 1929 ATGGCGTGGAAATAAAACTCAG 1908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1297963526609268
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |