Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5177 123 6e-23 seq54952 89.7 1e-12 >seq5177 Length=4331 Score = 123 bits (136), Expect = 6e-23 Identities = 468/724 (65%), Gaps = 14/724 (2%) Strand=Plus/Plus Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 |||||| | || || ||||| ||| || ||||| |||||| ||| || ||||| || Sbjct 2145 CCACAGCTTTCCTCCTGCTTCCTTATAGCTATGAAAGACGATAGCATTGAAGGTATTTTC 2204 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 || || | || | ||||| | ||||| || ||| || || || ||| || || Sbjct 2205 GATACTTTAAAACAATGTGCATTAATTTCTAAATCTGCCGGTGGCATAGGTTTAC--ATA 2262 Query 363712 CACAATG--TTCGTGCACAGAACAGTTACATTCGCGGCAC--AGGGGGATACTCGAATGG 363767 |||| || || | || ||| ||| || ||||| | |||| | |||||||| Sbjct 2263 CACATTGCATTAGAGCCCAGGGGTCTTATATAGCTGGCACTAATGGGGTT--TCGAATGG 2320 Query 363768 GCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGG 363827 || || || ||| | | |||| |||||||||| || || || || || |||||| Sbjct 2321 TCTAGTGCCAATGTTGAGAGTGTACAACAATACTGCCAGATATGTAGATCAAGGTGGAAA 2380 Query 363828 AAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTT 363887 || || || || ||||| || || | |||||| ||||| || || |||||||| Sbjct 2381 CAAACGTCCCGGTGCATTTGCAATTTACTTAGAGCCTTGGCATGCGGACATATTTGAGTT 2440 Query 363888 TCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGC 363947 | || | || ||||| || || || ||| || | || | || ||||| ||||| Sbjct 2441 CTTAGATTTAAAAAAGAACACAGGTAAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGC 2500 Query 363948 ACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTT 364007 | ||| | | || | |||||||| | || || | | | ||||| ||| | Sbjct 2501 TTTATGGATACCAGATCTGTTTATGAAAAGGGTAGAAAAGGATGAAGATTGGAGTCTCAT 2560 Query 364008 TTGCCCACACGAATGTCCAGGTCTTTCCGA-TGTATGGGGTGACGACTATGTTGCTCTAT 364066 || || || || ||||| || || | || ||| | || || || | | || |||| Sbjct 2561 GTGTCCTCATGATTGTCCTGGCCTCGCTGACTGT-TACGGAGAGGAATTCGAAGCCCTAT 2619 Query 364067 ACGAAAAGTATGAATCGGAGGGAAA-GGCTCGTAAGACAATTCCC-GCACAGAAGCTATG 364124 | | || |||||| | || ||| || | ||| || | || || || || |||| Sbjct 2620 ATGCCAAATATGAA--GAAGAAAAACGGTTTATAAAACGAGTCAGAGCTCAAGAGTTATG 2677 Query 364125 GTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTC 364184 | | || || || | || | ||||| || ||||| ||||||||||| || ||| | Sbjct 2678 GAAGTCTATTATAGAAGCTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGATGC 2737 Query 364185 GTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTAC 364244 |||||| | ||| || || | | ||||| || ||| | ||||| || || || Sbjct 2738 TTGCAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGCAC 2797 Query 364245 CGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 ||| || | ||||||| | || || || || || |||||||| || || || Sbjct 2798 TGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGC 2857 Query 364305 GCTT 364308 ||| Sbjct 2858 ACTT 2861 >seq54952 Length=6343 Score = 89.7 bits (98), Expect = 1e-12 Identities = 105/142 (74%), Gaps = 0/142 (0%) Strand=Plus/Minus Query 65872 TTACGAATCGTTCCGTCATAATTGCACATATTATCTTCACTTGCCTTTACAAGACAACGC 65931 ||||| | ||||| ||||||| |||| | || | ||||||| |||| |||| Sbjct 2049 TTACGGACAGTTCCATCATAATGTACCATAACAGACTCCATAGCCTTTATTAGACGACGC 1990 Query 65932 TGGATGTAACCACTGTTTGCAGTTTTTACCGCGGTATCAACGAGACCTTCACGCCCGGAC 65991 || ||||||||| | | |||||||||||||| ||||||| |||||||||||| || | Sbjct 1989 TGAATGTAACCAGTTTCAGCAGTTTTTACCGCAGTATCAATGAGACCTTCACGACCTCCC 1930 Query 65992 ATTGCAGAAAAGAAAAACTCAG 66013 || || || ||||||||| Sbjct 1929 ATGGCGTGGAAATAAAACTCAG 1908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1297963526609268