Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq21365 269 2e-67 seq153336 140 3e-28 seq117972 114 1e-20 seq218964 98.7 9e-16 seq131538 96.9 3e-15 seq66322 84.2 2e-11 >seq21365 Length=2821 Score = 269 bits (298), Expect = 2e-67 Identities = 666/996 (67%), Gaps = 27/996 (3%) Strand=Plus/Minus Query 55813 TGGATAAAATCGTTGCCGCATATTTTGTCGAGTGGGGTGTTTATCATAGAAACTTTCCTG 55872 |||| ||| | || | ||| || || || || |||||||| || | ||| || || || | Sbjct 1334 TGGA-AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCG 1276 Query 55873 TCACTCGAGTTCCCACTCCTAATCTGTCACACATTCTCTACGGATTCATACCGATATGCG 55932 | ||| | || | |||||||| | || | ||||| || || || || || |||| Sbjct 1275 TGGATCGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCG 1216 Query 55933 GCGGCGACGGCATTAACGACAGTCTCAAGACGATAACCGGTAGTTTTGAAGCGCTTCAGC 55992 |||| |||||||| || || || | || ||| || ||||| |||| || || | Sbjct 1215 GCGGTGACGGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAAC 1156 Query 55993 GATCGTGTTCGGGTCGAGACGACTTCAAAGTGTCGATTCATGACCCGTGGGCTGCGGTCC 56052 | || ||| || || || ||||||||||| || || || || || ||||| || | | Sbjct 1155 GGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTAC 1096 Query 56053 AAAAGCCCCAAAAACAAGTGACCGCATGGAACGAACCATACAAAGGCAACTTTGGACAAT 56112 |||| || |||||| | || | |||||||||| || ||||||||||||||||| |||| Sbjct 1095 AAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAAT 1036 Query 56113 TGATGGCAGCTAAACTGGCGAATCCCCATG--TTAAAG-TGCTGCCTTCGATCGGTGGCT 56169 | ||| || |||| || | || || || ||| | || || ||||| ||||| | Sbjct 1035 TAATGTCACTAAAACAAGCC---CGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGT 979 Query 56170 GGACTTTATCCGATCCGTTCTTTTACTT---TCACGATGCGGTCAAACGCAAAATTTTTG 56226 |||| | ||||||| ||||| | || | || | | ||| | | | |||| Sbjct 978 GGACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCT---AAAAGAACACGATTTG 922 Query 56227 TCGATTCTGTCGTCGAGTTTTTACAGACCTGGAAATTTTTCGATGGTGTCGACATCGACT 56286 | | || || |||||| | | || |||||||| ||||||||||| || ||||| | Sbjct 921 TGCAGTCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATT 862 Query 56287 GGGAGTTTCCCGGCGGAAAGGGGGCCAATTCCAACGTCGGCGATGCCGAACGCGATCGCA 56346 |||||||||| || || || || || || | || |||| | ||| ||| | Sbjct 861 GGGAGTTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGGTAGCCCAGAA---GATGGTG 805 Query 56347 ACACGTACACGATTCTGTTACGAGATTTACGCGAAGCGCTAGACCGA---CTAAGCCTCG 56403 | || | | || | ||| ||||| || ||| || || || ||| | Sbjct 804 ATTGTTATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGA-TGAGCTCTCAGCTAAG 746 Query 56404 AAACGAATCGAACATACGAGCTAACCAGCGCCATTAGCGCCGGCGATGACAAAATCACGG 56463 || | | ||| |||||| | || || |||||| | || || |||||| | Sbjct 745 AATGGCA-AGAA-ATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAG 688 Query 56464 TCGTCGACTACACAGCCGCTCAAAAATATTTAGATTATAtttttttGATGACATACGATT 56523 | || |||||| |||||||| ||| | ||| ||||||| ||||||| || || | Sbjct 687 TTGTTGACTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACT 628 Query 56524 TTAAAGGCGCTTGGTCGAATAGCGATCTGGGCTATCAGACGACTTTGTACGCGCCTGCGT 56583 | || || || ||||| ||| ||| || |||| || | |||||||||||||| | Sbjct 627 TCAAGGGAGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCAT 568 Query 56584 TTAATCCTAAAGAACACTATACGACCGATTTTGCGGT-TCGTGCTCTGCTTAAACAAAAA 56642 ||||| || ||| || || | || || | || | || || | ||| | Sbjct 567 GGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACT-TGTTGGCACAGGGA 509 Query 56643 GTCGAGAATAAAAAGATTGTAGTCGGCGTAGCTATGTACGGTCGCGGGTGGACCGGCGTC 56702 || | ||| ||||||||| | || || || ||||| ||||| || ||||| ||||| Sbjct 508 GTGAATCCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTT 449 Query 56703 GGTGATTTCGTCGACAAAAACAATCCATTTTCCGGCACGGCCAAGGGACCTGTCAAAGGT 56762 ||||| || ||| |||| ||| || | |||| || | ||||||||||||||| Sbjct 448 CATGATTACGAAGAC---AACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGT 392 Query 56763 ACCTGGGAAGACGGAGTCGTTGATTTTAGAGAAATT 56798 || ||| |||||||||| ||||||| ||||| ||| Sbjct 391 ACTTGGCAAGACGGAGTGGTTGATTACAGAGAGATT 356 >seq153336 Length=250 Score = 140 bits (154), Expect = 3e-28 Identities = 162/215 (75%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | |||||||||||| ||||||||||| | ||||| | ||||| || || Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || ||||| | || || ||||||| ||||| |||||||| ||||| || || Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTAT 24167 ||| ||| |||||| || ||| |||||||| |||||| | | | || ||| || ||| Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTC--GGACTAT 56 Query 24168 AACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 ||||| || || |||||||| | || |||||||| Sbjct 55 AACATCCAGAAGGAATCTACTTTGCACTTAGTGTT 21 >seq117972 Length=685 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| |||||| | ||||| ||| | ||||| | ||||| || ||| Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| || || | || || || || |||||||||||||| ||||| |||||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 || | || |||| || ||||||||| | ||||||| | | | || || ||| Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || |||||||||||||| | |||||||| | | || ||||| ||| Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGA 273 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 |||||| | ||||| ||||| |||||||||| | ||||| | ||||| || || Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | || ||| || || |||||||| ||||| || || ||||| Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || || | | || |||||| | ||||||| | | | |||||| || Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||||||||||||||||| ||||||| || || Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATT 61 >seq218964 Length=932 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||||||||| | || || |||||| | || || ||| | ||||| | ||||| || | Sbjct 636 CAAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACC 695 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 |||||| || || | || ||| || ||| ||||| |||||||| ||||| || Sbjct 696 TTCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGA 755 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 |||||| | |||||| || || |||||| | ||||| | | | | | || || Sbjct 756 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTA 815 Query 24167 TAACATTCAAAAAGAATCTACAATTCA 24193 |||||||||||||||||||| |||| Sbjct 816 CAACATTCAAAAAGAATCTACTCTTCA 842 >seq131538 Length=717 Score = 96.9 bits (106), Expect = 3e-15 Identities = 104/135 (77%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 24084 GACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAA 24143 |||||||||||||| ||||| || |||||||| |||||| | ||| |||||||| ||| Sbjct 24 GACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTTTTGCCGGTAAGCAACTTGAA 83 Query 24144 GATGACAGAAACGTCAGC-GATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTT 24202 |||| | ||| | | | ||||| || ||||| ||||||||||| |||| | || | Sbjct 84 GATG-GACGAACATTATCTGATTACAATATTCAGAAAGAATCTACTCTTCACCTTGTTCT 142 Query 24203 AAGATTGAGAGGAGG 24217 ||| ||||||| || Sbjct 143 CAGACTGAGAGGTGG 157 >seq66322 Length=2150 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/198 (70%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 60884 TCTCAAACTCACGACGCTCTGTGGAATAGAGCTCAAGAAGACTTGCGAGAAA-ACGGCAA 60942 ||| |||| ||||||| | ||||| ||||||| | | || | |||| | ||||| Sbjct 1874 TCTAAAACACACGACGACTTATGGAACTCAGCTCAAATACAGCTG-GTGAAAGAGGGCAA 1932 Query 60943 AATACATCCGTTCATACGCGTATACTGGGCCaaaaaaaTATTGGAATGGACACCGACGCC 61002 || ||| ||| ||||| | |||||| ||| || || ||||||||||| | | |||| Sbjct 1933 GATGCATGGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTGGAATGGACCCAGTCGCC 1992 Query 61003 CGAAGAGGCACTGAACCGTGCGATCTACCTCAACCAGCGATACGCTGTCGACGGTTGCGA 61062 |||| |||| |||| ||| || ||| | || | | ||| ||| ||||| | || Sbjct 1993 CGAACAGGCTTTGAAGTATGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGA 2052 Query 61063 TCCCAGCGGTTATGTAGG 61080 ||| | |||||||| || Sbjct 2053 TCCAAATGGTTATGTTGG 2070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428244714269970