Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq21365 221 1e-52 seq2512 168 6e-37 seq117972 127 2e-24 seq218964 109 5e-19 >seq21365 Length=2821 Score = 221 bits (244), Expect = 1e-52 Identities = 587/885 (66%), Gaps = 29/885 (3%) Strand=Plus/Minus Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236 || || || ||||||||||| || ||| | || ||||| | || | || | Sbjct 1318 GCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATACCTATA 1259 Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296 || ||| | | ||| || | || || |||||||| ||||||||||| ||||| |||| Sbjct 1258 CCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAAT 1199 Query 32297 GATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGC 32356 ||| | | ||| ||| |||||||| | || |||||||| || || | ||||| Sbjct 1198 GATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGT 1139 Query 32357 GCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGC 32416 | ||||| || || | || ||||| || ||||| ||| |||||||||| || || || Sbjct 1138 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 1079 Query 32417 GTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTG 32476 ||||| | |||||||| |||||||||||||||||||||||||| ||| | || Sbjct 1078 TTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 1019 Query 32477 GCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCC---C 32533 || |||| | | || ||| | || || ||||| ||||||||| | | ||||| | Sbjct 1018 GCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTTC 959 Query 32534 TTTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTT 32593 || | ||| | || | | |||| |||| ||||| | || || || |||||| Sbjct 958 TTCTTTTTAGTTGACAAATC--TAAAAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTTT 902 Query 32594 TTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAA 32653 | | ||||||||||| || || || || || ||||||||||| || || || ||| Sbjct 901 CTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAAA 842 Query 32654 GGTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTA 32713 ||||| ||||| | ||||||| | || || | | || | | |||| | Sbjct 841 GGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATG 785 Query 32714 CAAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGTT 32772 ||||||| ||| ||||| || || || ||| | | | ||||| | ||||| || Sbjct 784 AAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCT-AAGAATGGCAAGAAATACGAATT 726 Query 32773 GACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATG--AAGCCGCG 32830 |||| || ||||| | || || ||||| || || | || | ||| || Sbjct 725 GACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAG--GCT 668 Query 32831 CAAAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAAC 32890 ||||| || | ||| | || || | |||||||| ||||| || || || ||||| || Sbjct 667 CAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAAA- 609 Query 32891 ACCGAT----TTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATT 32946 ||| |||| | |||| || | |||||||| || ||||||||| | ||| Sbjct 608 --TGATACTCTTGGAC-ATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAAC 552 Query 32947 GTACACCACAGATCACGCTGTTAAA---TTGTTAACAAGTCAAGGTGTAGCTTCTTACAA 33003 ||||| | || || || ||| ||||| || || || || | || | || Sbjct 551 TTACACATCTGACTTCGGAGTAAAATACTTGTTGGCA---CAGGGAGTGAATCCTAAGAA 495 Query 33004 AATCATTGTCGGCATCGCCATGTACGGTCGCGGGTGGACGGGCGT 33048 || | | || | |||||||| ||||| || ||||| ||||| Sbjct 494 GATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGT 450 >seq2512 Length=3386 Score = 168 bits (186), Expect = 6e-37 Identities = 184/242 (76%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317 |||||| ||| || || ||||| || | |||| ||| ||||||| |||| |||||| Sbjct 1210 TGCGCAGCTTCAGC-GACTGGCCCCGCAGCATGAAGCAGAAACCCGAGGAACTCGCCGAG 1152 Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377 || || || | ||||| ||||||||||| ||||| || || || || ||||||||||| Sbjct 1151 GCGGGATTCTTCTACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGG 1092 Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437 | || ||||||||| ||||| | ||||||| | | ||||||||| ||||| ||||| Sbjct 1091 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGA 1032 Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497 ||| ||||||| ||| || ||||| ||||| ||||| || || | || ||||| || Sbjct 1031 TGCGCTTACGTCCAGCTGGTAAAGGGCCGAGACTATGTACAGAAGGTGGTCACGGAGGCG 972 Query 109498 TG 109499 || Sbjct 971 TG 970 >seq117972 Length=685 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| |||||||| ||||| || || ||||| |||||||| | ||| ||| || Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || ||| ||| | | |||||| ||||| || ||||| ||| |||| |||||| Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||| | ||| || || ||||| ||||||| || | ||||||| || Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 |||||||||||| |||||| | ||| |||| ||| | | || || |||| Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGAA 44 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||||||||| ||||| || || || ||||| ||||| | ||| || || Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||||| ||| | | ||||| ||||| || ||||||||| | || ||||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| |||||||| ||||| ||||||| || | | || || ||| Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 || |||||||| |||||| | ||| Sbjct 320 ATCCAAAAAGAATCTACTTTGCAT 297 >seq218964 Length=932 Score = 109 bits (120), Expect = 5e-19 Identities = 173/247 (70%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 115269 TTTATAAGAGAT-TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327 ||| | | |||| | |||||||| ||||| || ||||| |||||||| ||||||||||| Sbjct 622 TTTGTTACAGATATCAAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACT 681 Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387 | ||| || | ||||||| ||| | | |||||| |||||| || || ||| Sbjct 682 TTGGAAGTTGAACCTTCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAA 741 Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447 ||| | || ||||| ||| | | |||| || || || ||||| ||||| | | Sbjct 742 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGC 801 Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGA 115507 || | | || || |||||||||||||| |||||| | || |||| ||| | | || Sbjct 802 ACTCTTTCAGACTACAACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGT 861 Query 115508 GGAGGAA 115514 || |||| Sbjct 862 GGTGGAA 868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423670778316880