Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 221 1e-52
seq2512 168 6e-37
seq117972 127 2e-24
seq218964 109 5e-19
>seq21365
Length=2821
Score = 221 bits (244), Expect = 1e-52
Identities = 587/885 (66%), Gaps = 29/885 (3%)
Strand=Plus/Minus
Query 32177 GCGTATTTTGTAGAATGGGGCGTGTACGGGCGCAATTTCCCAATAGACAAAGTGCCGTTG 32236
|| || || ||||||||||| || ||| | || ||||| | || | || |
Sbjct 1318 GCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATACCTATA 1259
Query 32237 CCCAATTTGTCGCATCTGTTGTACGGATTTATTCCTATTTGCGGCGGCGACGGACTAAAC 32296
|| ||| | | ||| || | || || |||||||| ||||||||||| ||||| ||||
Sbjct 1258 CCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAAT 1199
Query 32297 GATGCCCTCAAAACGATACCGGGCAGTTTTGAGGCGCTGCAACGTTCGTGCAAAGGCCGC 32356
||| | | ||| ||| |||||||| | || |||||||| || || | |||||
Sbjct 1198 GATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGT 1139
Query 32357 GCAGACTTTAAGGTTGCCATTCACGACCCTTGGGCCGCAATACAAAAACCGCAGAAGGGC 32416
| ||||| || || | || ||||| || ||||| ||| |||||||||| || || ||
Sbjct 1138 GAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGA 1079
Query 32417 GTGTCTGCGTGGAACGAACCCTACAAAGGCAACTTTGGCCAATTGATGGCGGCCAAGTTG 32476
||||| | |||||||| |||||||||||||||||||||||||| ||| | ||
Sbjct 1078 TTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAA 1019
Query 32477 GCAAACCCTCACATAAAAATTTTACCATCTATTGGCGGGTGGACGTTGTCGGATCC---C 32533
|| |||| | | || ||| | || || ||||| ||||||||| | | ||||| |
Sbjct 1018 GCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTTC 959
Query 32534 TTTTATTTTATGCACGACGCGGAAAAACGGCACGTGTTTGTCGATTCCGTCAAAGAGTTT 32593
|| | ||| | || | | |||| |||| ||||| | || || || ||||||
Sbjct 958 TTCTTTTTAGTTGACAAATC--TAAAAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTTT 902
Query 32594 TTACAGGTTTGGAAATTCTTTGACGGAGTGGACATTGATTGGGAGTTCCCGGGCGGCAAA 32653
| | ||||||||||| || || || || || ||||||||||| || || || |||
Sbjct 901 CTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAAA 842
Query 32654 GGTGCCAACCCGGCGCTCGGTAACGGGGAGCGCGACGCGCACACGTACATTATTTTGTTA 32713
||||| ||||| | ||||||| | || || | | || | | |||| |
Sbjct 841 GGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATG 785
Query 32714 CAAGAATTGCGTTCTATGCTGGACGACCT-TCAATTGCAAACGGGCAAAACGTACGAGTT 32772
||||||| ||| ||||| || || || ||| | | | ||||| | ||||| ||
Sbjct 784 AAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCT-AAGAATGGCAAGAAATACGAATT 726
Query 32773 GACTAGCGCAATTAGTGCCGGCCACGACAAAATTGCTGTGGTGCAATATG--AAGCCGCG 32830
|||| || ||||| | || || ||||| || || | || | ||| ||
Sbjct 725 GACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAG--GCT 668
Query 32831 CAAAAGTACCTCGATAAAATATTTCTCATGAGTTACGACTTTAAAGGGGCATGGTCTAAC 32890
||||| || | ||| | || || | |||||||| ||||| || || || ||||| ||
Sbjct 667 CAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAAA- 609
Query 32891 ACCGAT----TTGGGCTATCAGACCACTTTGTACGCTCCAAGTTGGAATCCCGATGAATT 32946
||| |||| | |||| || | |||||||| || ||||||||| | |||
Sbjct 608 --TGATACTCTTGGAC-ATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAAC 552
Query 32947 GTACACCACAGATCACGCTGTTAAA---TTGTTAACAAGTCAAGGTGTAGCTTCTTACAA 33003
||||| | || || || ||| ||||| || || || || | || | ||
Sbjct 551 TTACACATCTGACTTCGGAGTAAAATACTTGTTGGCA---CAGGGAGTGAATCCTAAGAA 495
Query 33004 AATCATTGTCGGCATCGCCATGTACGGTCGCGGGTGGACGGGCGT 33048
|| | | || | |||||||| ||||| || ||||| |||||
Sbjct 494 GATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGT 450
>seq2512
Length=3386
Score = 168 bits (186), Expect = 6e-37
Identities = 184/242 (76%), Gaps = 2/242 (1%)
Strand=Plus/Minus
Query 109259 TGCGCA-CTTTTGCAGAATGGCCTCGTGGTTTGAAACAGCAACCCGATAAACTAGCCGAG 109317
|||||| ||| || || ||||| || | |||| ||| ||||||| |||| ||||||
Sbjct 1210 TGCGCAGCTTCAGC-GACTGGCCCCGCAGCATGAAGCAGAAACCCGAGGAACTCGCCGAG 1152
Query 109318 GCCGGGTTTTATTACACGGGCCAGGGCGATAAAACCAAATGTTTTTATTGTGACGGCGGT 109377
|| || || | ||||| ||||||||||| ||||| || || || || |||||||||||
Sbjct 1151 GCGGGATTCTTCTACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGG 1092
Query 109378 TTGAAAGACTGGGAGGCGGACGATGAGCCGTGGAAACTGCACGCGCGTTGGTTTGACCGT 109437
| || ||||||||| ||||| | ||||||| | | ||||||||| ||||| |||||
Sbjct 1091 CTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGA 1032
Query 109438 TGCCCTTACGTGTTGCTTGTTAAGGGTCGAGATTATGTGCAAAAAATTGTAACGGAATCG 109497
||| ||||||| ||| || ||||| ||||| ||||| || || | || ||||| ||
Sbjct 1031 TGCGCTTACGTCCAGCTGGTAAAGGGCCGAGACTATGTACAGAAGGTGGTCACGGAGGCG 972
Query 109498 TG 109499
||
Sbjct 971 TG 970
>seq117972
Length=685
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344
|||||| |||||||| ||||| || || ||||| |||||||| | ||| ||| ||
Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214
Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404
|| ||| ||| | | |||||| ||||| || ||||| ||| |||| ||||||
Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154
Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464
||| | ||||| | ||| || || ||||| ||||||| || | ||||||| ||
Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94
Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514
|||||||||||| |||||| | ||| |||| ||| | | || || ||||
Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGAA 44
Score = 98.7 bits (108), Expect = 8e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345
|||||||||||||| ||||| || || || ||||| ||||| | ||| || ||
Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441
Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405
||||| ||| | | ||||| ||||| || ||||||||| | || |||||
Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381
Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465
||| | ||||||| |||||||| ||||| ||||||| || | | || || |||
Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321
Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489
|| |||||||| |||||| | |||
Sbjct 320 ATCCAAAAAGAATCTACTTTGCAT 297
>seq218964
Length=932
Score = 109 bits (120), Expect = 5e-19
Identities = 173/247 (70%), Gaps = 1/247 (0%)
Strand=Plus/Plus
Query 115269 TTTATAAGAGAT-TAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACC 115327
||| | | |||| | |||||||| ||||| || ||||| |||||||| |||||||||||
Sbjct 622 TTTGTTACAGATATCAAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACT 681
Query 115328 GTCGAAACGGAGTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAA 115387
| ||| || | ||||||| ||| | | |||||| |||||| || || |||
Sbjct 682 TTGGAAGTTGAACCTTCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAA 741
Query 115388 GGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAA 115447
||| | || ||||| ||| | | |||| || || || ||||| ||||| | |
Sbjct 742 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGC 801
Query 115448 ACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGA 115507
|| | | || || |||||||||||||| |||||| | || |||| ||| | | ||
Sbjct 802 ACTCTTTCAGACTACAACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGT 861
Query 115508 GGAGGAA 115514
|| ||||
Sbjct 862 GGTGGAA 868
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423670778316880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |