Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 165 8e-36
seq5177 127 2e-24
seq117972 104 2e-17
seq218964 95.1 1e-14
>seq21365
Length=2821
Score = 165 bits (182), Expect = 8e-36
Identities = 335/494 (68%), Gaps = 10/494 (2%)
Strand=Plus/Minus
Query 23642 CGCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGT 23701
||||||||| || || ||||| || || || || |||| ||||| || | || |
Sbjct 1319 CGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1260
Query 23702 GCCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAA 23761
|||||| | | ||||||||||| ||||| | || || |||||||| || || || ||
Sbjct 1259 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1200
Query 23762 CGACGCTCTCAAAACCGTGCCG-GGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCC 23820
|| || |||| | | ||||||||| | || ||||| || || || ||||
Sbjct 1199 TGATAG-CTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCC 1141
Query 23821 GCGCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGG 23880
| | |||||||| || || ||||||||||| |||||||| | || || || || || |
Sbjct 1140 GTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAG 1081
Query 23881 GAGTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAAC 23940
|| |||| | ||||||||||| || || |||||||| || || ||| || ||||
Sbjct 1080 GATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAAC 1021
Query 23941 TGGCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGT 24000
|| || | ||||| | || || ||||| ||||| |||||||| | ||||| |
Sbjct 1020 AAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTT 961
Query 24001 T----TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAG 24056
| || | | || | | | | || | ||| | | || || | |||
Sbjct 960 TCTTCTTTTTAGTTGACAAATCTAAAAGAACAC----GATTTGTGCAGTCAGTAAAGGAG 905
Query 24057 TTTTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGC 24116
||| | |||| ||||||||||| || || || || || ||||||||||| || || ||
Sbjct 904 TTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGT 845
Query 24117 AAAGGGGCAAATCC 24130
||||| || || ||
Sbjct 844 AAAGGTGCTAACCC 831
>seq5177
Length=4331
Score = 127 bits (140), Expect = 2e-24
Identities = 440/685 (64%), Gaps = 10/685 (1%)
Strand=Plus/Minus
Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162
|| || || || ||||||||||| || | ||||| || ||||| || || | || ||
Sbjct 3373 TTTGATGTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTC 3314
Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222
||||| || | ||||| ||||| |||| || || || || | ||| || ||
Sbjct 3313 GGCATAGGTGCTATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGG 3254
Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282
| |||| ||||| || || || | || |||||| || ||||| | || ||
Sbjct 3253 ACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCT 3194
Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGC 145340
| ||| || || || |||||| | | ||||| ||| || |||| || | || |
Sbjct 3193 TGGCTAGCTGGACTTCCTTGATATGTGCTGTA--TGCACCTTCTTTTTCTGCTAATTCAC 3136
Query 145341 AACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCG 145400
|||| || || | || || |||||||||| || ||||| || || || || |
Sbjct 3135 AACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTG 3076
Query 145401 CTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTC 145460
||| || || ||||| || || | || || ||||| | ||| || | ||||| | |
Sbjct 3075 CTTTCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCCATACCCTGAACAC 3016
Query 145461 CCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGAT 145520
| | ||||| || || || |||| || | | || || |||||| |
Sbjct 3015 CAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGT 2956
Query 145521 TACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTT 145580
|| || || | ||| || || ||| | || | ||| || || | || ||||
Sbjct 2955 TAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTT 2896
Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640
||| ||| ||| | ||||| | || | || | || || || || | |
Sbjct 2895 TAAAACTAAATCGATTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGT 2842
Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700
| || |||||| || || | ||||||| || | ||| | ||| | ||||||||
Sbjct 2841 TGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTAC 2782
Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760
|||| || || || ||||||| |||||||| || |||||||| || ||||| || | ||
Sbjct 2781 ATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACA 2722
Query 145761 TGTACGGTCCGCCAGTCTCCACCTG 145785
| || ||| ||||||||||| ||
Sbjct 2721 TATATGGTGTACCAGTCTCCACTTG 2697
>seq117972
Length=685
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || ||||| | || || || ||||||||||||||||||
Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| || || | ||||| || || |||| | |||||||| || || |||
Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || |||||||| |||||| || | | || | |||||| | || || |
Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 225
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||| || || ||||| ||||| || |||||||||||
Sbjct 226 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
>seq218964
Length=932
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||||| || | || | || || || |||||||||||||| ||
Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || | ||||| || ||| | || ||||| || || || |||||
Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| |||||| || | | || | ||| |||| | || |
Sbjct 746 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 687
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| ||||||||| || || ||||| ||||||||||||||
Sbjct 686 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 470108381756160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |