Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq21365 165 8e-36 seq5177 127 2e-24 seq117972 104 2e-17 seq218964 95.1 1e-14 >seq21365 Length=2821 Score = 165 bits (182), Expect = 8e-36 Identities = 335/494 (68%), Gaps = 10/494 (2%) Strand=Plus/Minus Query 23642 CGCCTACTTTGTCGAGTGGGGCGTATATCCCAGACAATTTCCCGTAGACAAAGTGCCCGT 23701 ||||||||| || || ||||| || || || || |||| ||||| || | || | Sbjct 1319 CGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATACCTAT 1260 Query 23702 GCCTAATTTGTCACATTTGCTCTACGGCTTCGTACCTATATGCGGCGGCGAGGGAATTAA 23761 |||||| | | ||||||||||| ||||| | || || |||||||| || || || || Sbjct 1259 ACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAA 1200 Query 23762 CGACGCTCTCAAAACCGTGCCG-GGCAGTTTCGAGGCGCTGCAGCGTTCGTGCGCGGGCC 23820 || || |||| | | ||||||||| | || ||||| || || || |||| Sbjct 1199 TGATAG-CTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCC 1141 Query 23821 GCGCCGACTTCAAGGTATCCATCCACGATCCGTGGGCAGCTCTTCAGAAGCCGCAGAAGG 23880 | | |||||||| || || ||||||||||| |||||||| | || || || || || | Sbjct 1140 GTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAG 1081 Query 23881 GAGTGTCGGCGTGGAACGAGCCGTATCGTGGAAACTTTGGTCAGTTGATGGCAACGAAAC 23940 || |||| | ||||||||||| || || |||||||| || || ||| || |||| Sbjct 1080 GATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAAC 1021 Query 23941 TGGCGTATCCGCACTTGAAAGTGCTACCTTCGATCGGTGGCTGGACGCTGTCTGATCCGT 24000 || || | ||||| | || || ||||| ||||| |||||||| | ||||| | Sbjct 1020 AAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTT 961 Query 24001 T----TTATCACATGCACGAGCCCAGCGTACGCCGTGTGTTTATCGACTCTGTCGAAGAG 24056 | || | | || | | | | || | ||| | | || || | ||| Sbjct 960 TCTTCTTTTTAGTTGACAAATCTAAAAGAACAC----GATTTGTGCAGTCAGTAAAGGAG 905 Query 24057 TTTTTGTTAACGTGGAAATTCTTTGACGGCGTCGACATTGATTGGGAGTTCCCCGGCGGC 24116 ||| | |||| ||||||||||| || || || || || ||||||||||| || || || Sbjct 904 TTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGT 845 Query 24117 AAAGGGGCAAATCC 24130 ||||| || || || Sbjct 844 AAAGGTGCTAACCC 831 >seq5177 Length=4331 Score = 127 bits (140), Expect = 2e-24 Identities = 440/685 (64%), Gaps = 10/685 (1%) Strand=Plus/Minus Query 145103 TTAGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTG 145162 || || || || ||||||||||| || | ||||| || ||||| || || | || || Sbjct 3373 TTTGATGTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTC 3314 Query 145163 GGCATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGC 145222 ||||| || | ||||| ||||| |||| || || || || | ||| || || Sbjct 3313 GGCATAGGTGCTATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGG 3254 Query 145223 GTACCCCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCC 145282 | |||| ||||| || || || | || |||||| || ||||| | || || Sbjct 3253 ACAGCCCAGTCCCAAAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCT 3194 Query 145283 TCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG--GCGAGCTCGC 145340 | ||| || || || |||||| | | ||||| ||| || |||| || | || | Sbjct 3193 TGGCTAGCTGGACTTCCTTGATATGTGCTGTA--TGCACCTTCTTTTTCTGCTAATTCAC 3136 Query 145341 AACTCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCG 145400 |||| || || | || || |||||||||| || ||||| || || || || | Sbjct 3135 AACTAGCTTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTG 3076 Query 145401 CTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTC 145460 ||| || || ||||| || || | || || ||||| | ||| || | ||||| | | Sbjct 3075 CTTTCTCACTTTCGTAAGGTATTCTCATCAACACAAATGTATCTGCCATACCCTGAACAC 3016 Query 145461 CCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGAT 145520 | | ||||| || || || |||| || | | || || |||||| | Sbjct 3015 CAATACCGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGT 2956 Query 145521 TACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTT 145580 || || || | ||| || || ||| | || | ||| || || | || |||| Sbjct 2955 TAACATCAATGACTTTGTTTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTT 2896 Query 145581 CAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAAT 145640 ||| ||| ||| | ||||| | || | || | || || || || | | Sbjct 2895 TAAAACTAAATCGATTATTTTCAACAAACA------TGTTAAGTGCTATGGAAGCAAGGT 2842 Query 145641 TACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTAC 145700 | || |||||| || || | ||||||| || | ||| | ||| | |||||||| Sbjct 2841 TGCACACTGCCACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTAC 2782 Query 145701 ATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCA 145760 |||| || || || ||||||| |||||||| || |||||||| || ||||| || | || Sbjct 2781 ATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACA 2722 Query 145761 TGTACGGTCCGCCAGTCTCCACCTG 145785 | || ||| ||||||||||| || Sbjct 2721 TATATGGTGTACCAGTCTCCACTTG 2697 >seq117972 Length=685 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || ||||| | || || || |||||||||||||||||| Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| || || | ||||| || || |||| | |||||||| || || ||| Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || |||||||| |||||| || | | || | |||||| | || || | Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 225 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||| || || ||||| ||||| || ||||||||||| Sbjct 226 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 >seq218964 Length=932 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||| || | || | || || || |||||||||||||| || Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || | ||||| || ||| | || ||||| || || || ||||| Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| ||||| |||||| || | | || | ||| |||| | || | Sbjct 746 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 687 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| ||||||||| || || ||||| |||||||||||||| Sbjct 686 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470108381756160