Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq21365 196 4e-45 seq218964 102 7e-17 seq117972 98.7 8e-16 >seq21365 Length=2821 Score = 196 bits (216), Expect = 4e-45 Identities = 724/1120 (65%), Gaps = 31/1120 (3%) Strand=Plus/Plus Query 95829 ATATTCATGGCATTAAGCAGATCGCCATTGTCAGCGTCTATTTCCCAGGCAAACAAACCT 95888 || ||||||||||| || ||||| || ||||| ||||| |||||||| ||||| | ||| Sbjct 141 ATGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCA 200 Query 95889 CCTAACTTGTTTTGTTCCACATATCGACCTTTAGCTATAACAGAATCAACACTATCATAT 95948 |||| ||||| | | ||||||| ||| || | ||||| || | || | ||||| Sbjct 201 CCTAGTTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGATCTAGCATTGTCATAG 260 Query 95949 GAAATTAAATCGCCT-TTGGTTTTATCAAAAACGTAGGCGGCTTTTGCTACGTTGTCAAA 96007 | | | || || ||| | | | || | | || | |||| || || ||||| | Sbjct 261 GTTACAAGGTCTCCAGTTGATGGTCTGAAGA-CATAAGGAGCTTGGGCGACATTGTCGTA 319 Query 96008 TTTAACAATATATTTGTTT------ATTTCGTTTTTGATTTGGCGATAATCAACAACGCC 96061 | || | ||| | ||||| || || | | |||||||| || || Sbjct 320 ATGAAATTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCC 379 Query 96062 ATCTTCCCAAGTGCCCGAAACGGGCCCGTTACTACTTCCCAAAAAATAGTTATCGTTTTC 96121 |||| |||||| || || || || || | || || | | || ||| Sbjct 380 GTCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTC 439 Query 96122 GTAATT-TGACACTCCAGTCCAGCCGCGACCGTACATGGCCACGCCCACAATAATTTTGC 96180 ||||| ||| || |||||||| || ||||| |||||||| || || | | ||| || Sbjct 440 GTAATCATGA-ACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTCT 498 Query 96181 GCGGGTCCACGCCTTGATTTGTGAGCAA---TTTAACGGCATGGTCCGTGTTGTACAGCT 96237 || | ||| || || || | ||| ||| || | ||| | |||| | Sbjct 499 TAGGATTCACTCCCTG---TGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTT 555 Query 96238 CGTTTGGGTTCCAACTCGGCGCGTACAGTGTAGTTTGGTATCCCAAATCAATGTTTGACC 96297 | || || ||||| |||||||||| || ||||| | ||| | | | ||||||| Sbjct 556 CCTTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTTGACC 615 Query 96298 ACGCGCCTTTAAAATCGTAGCTCATGAGAAATATTTTGTCGAGGAACTTTTGCGCAACGT 96357 | || || || || || || ||||| | || || | || | | ||||| || | Sbjct 616 AGGCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGC 675 Query 96358 CGTATTTTACTACAGCAATTTTGTCGTGGCCGGCACTGATTGCACTTGTCAACTCGTACG 96417 |||| | || || ||||| || || | || || ||| ||||| ||||| Sbjct 676 CGTAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATT 735 Query 96418 TTTTGCCCGTTTGCAGTTGCAA-CTCGTCTAACATCACGCGCAATTCCTTTAATAGAATG 96476 | ||||| | | || || | ||| || | |||| | || ||||| || | | | | Sbjct 736 TCTTGCCATTCTT-AGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTT 794 Query 96477 TTGTACGTGTCAGCGTCGCGCTCTTTGTTGCCGAGCGTC-GGGTTGGCGCCTTTACCGCC 96535 || ||| | || ||| | | ||||| ||| ||||| || |||||||| || Sbjct 795 ACATAACAATCACCATCT---TCTGGGCTACCGAG-GTCAGGGTTAGCACCTTTACCACC 850 Query 96536 CGGAAATTCCCAGTCGATGTCCACTCCGTCGAAAAATTTCCAAACCTGCAAAAATTCTCT 96595 ||||| ||||| ||||| || || || ||||| |||||||| | | ||| || | Sbjct 851 AGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTT 910 Query 96596 GACGGAGTCTACAAACACGCGCCGTTTTTCCGCGTCGTGCATGTAATA----GAACGGGT 96651 || || | ||||| || | ||| | | || || ||| | ||| || | Sbjct 911 TACTGACTGCACAAAT---CGTGTTCTTTTAGATTTGT-CAACTAAAAAGAAGAAAGGAT 966 Query 96652 CGGACAGTGTCCAGCCGCCGATAGACGGCAGAATTTTAAGGTGTGGATTAGCCAGTTTGG 96711 ||| || ||||| || || || || || ||||| || | | || || |||| Sbjct 967 CGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTTA 1026 Query 96712 CCGCCATCAACTGACCAAAGTTGCCTTTGTAGGGCTCGTTCCAAGCAGACACGCCCTTTT 96771 | ||| || || ||||||||||||||||||||||||||||| | ||||| || |||| Sbjct 1027 GTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTT 1086 Query 96772 GCGGTTTTTGTACTGCGGCCCAAGGGTCGTGAATAGCAACTTTAAAATCTGAACGGCCCT 96831 | |||||||||| ||| ||||| || ||||| || | ||||| || || |||||| Sbjct 1087 GTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGC 1146 Query 96832 GGCAAGAGCGTTGCAGCGCTTCAAAACTACCGGGTATGGTTTTAAGGGCATCGTTAAGGC 96891 || || |||||||| |||| ||||| || || ||| | | ||| || | || Sbjct 1147 TACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTATGC 1206 Query 96892 CGTCGCCGCCACAAATGGGTATAAACCCGTACAACAAATG 96931 |||| ||||| |||||||| ||||| || || | |||||| Sbjct 1207 CGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATG 1246 >seq218964 Length=932 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || ||||| | || ||||| || || || || || ||||| ||||||||||| | Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | |||| |||||||| || || || |||| | || ||||| || ||| Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||| || ||||| ||||| | || || | | | ||||||| || || | Sbjct 746 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 687 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| || |||||||| || || || ||||| || ||||||||||||||| Sbjct 686 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTG 636 >seq117972 Length=685 Score = 98.7 bits (108), Expect = 8e-16 Identities = 161/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | || ||||| ||| || || || || ||||| |||||||| |||| Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | || |||||||| || || ||| | ||||| ||||| || || || Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | |||||||||||| || || ||| || || | | | ||| || ||| ||| Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCT--TTTACATTTTCAATAGTATCAGAGGGTTCCA 223 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 ||||| || ||||| ||||| || || ||||| ||||||||||||||| Sbjct 224 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 403494461534260