Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq99455 185 6e-42 seq21831 143 2e-29 seq176 140 2e-28 seq218964 132 3e-26 seq117972 113 3e-20 seq153336 100 2e-16 seq142030 95.1 8e-15 seq76853 91.5 1e-13 seq131538 84.2 1e-11 >seq99455 Length=547 Score = 185 bits (204), Expect = 6e-42 Identities = 134/155 (86%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 6162 ATGGGGACCCTGAACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCG 6221 |||||| || ||||||| || | || |||||||||||||||||||||||||| |||||| Sbjct 119 ATGGGGTCCTTGAACGTGAACAGGAACGTGGCGGACGCGTTCTACCGCTACAAGATGCCG 178 Query 6222 CGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATG 6281 ||||||||||||||||||||||| ||||| ||||| || || |||||||| ||||||||| Sbjct 179 CGCATCTGCGCCAAGGTCGAGGGCAAGGGGAACGGCATCAAGACCGTCATCGTCAACATG 238 Query 6282 CCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCAC 6316 || || |||||||||||||| || | || ||||| Sbjct 239 CCAGAGGTCGCTAAGGCGCTTGGCAGGCCGGCCAC 273 >seq21831 Length=2271 Score = 143 bits (158), Expect = 2e-29 Identities = 130/164 (79%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 6438 TTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTG 6497 ||||| ||||| ||||| || |||| || ||||| || || ||||| ||||| || ||| Sbjct 851 TTTATCCGCAAATTTGTCCTCTGTCCCGAGTGCGACAATCCCGAGACGGAGCTGATAGTG 792 Query 6498 TCTACCAAGAGAAACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTG 6557 || |||||||| ||||||||||| || |||||||| |||||||| ||||| ||| || Sbjct 791 TCCACCAAGAGGAACACCATCTCGCAAGGCTGCAAGGCGTGCGGGTACCACGGCCCCTTG 732 Query 6558 GATTTATCACACAAACTCAACACCTTCATACTGAAGAATCCTCC 6601 || || || ||||| || ||||||||||||||||| || || Sbjct 731 GAGTTCAACCATAAACTGAATACCTTCATACTGAAGAACCCGCC 688 Score = 84.2 bits (92), Expect = 1e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || || ||||| ||||| || ||||| || |||||||| || ||| || ||| Sbjct 1258 CCCACTAAGTACTTCGGATGCGAGCTCGGCGCCCAAACGCAGTTCGACTTCAAGAATGAG 1199 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGA 6424 ||||||||||||||||| ||| |||| |||||| |||| || Sbjct 1198 CGCTTCATCGTTAACGGCAGCCATGACTCCGCCAAGTTGCAAGA 1155 >seq176 Length=9840 Score = 140 bits (154), Expect = 2e-28 Identities = 77/77 (100%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2461 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 2520 Query 20007 GGTAATATTTAGCCTTA 20023 ||||||||||||||||| Sbjct 2521 GGTAATATTTAGCCTTA 2537 >seq218964 Length=932 Score = 132 bits (146), Expect = 3e-26 Identities = 171/235 (73%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | |||||| |||| |||||||| || |||||||| ||||| | Sbjct 870 CATT-CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGT 812 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | || |||| || ||||| ||||| || || || | ||||||||||| | Sbjct 811 CTGAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTG 752 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||| ||||| |||||| || ||||| | | ||| || | || Sbjct 751 GAGGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTT 692 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||||||| || ||||| ||||||||||| | ||||||||||| |||||||| || Sbjct 691 CAACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637 >seq117972 Length=685 Score = 113 bits (124), Expect = 3e-20 Identities = 165/232 (71%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | |||||| |||||||||||||| || |||||||| ||||||| Sbjct 42 CATT-CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAAT 100 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | || | | || | || || ||||| || || ||||| || ||||| || ||||| | Sbjct 101 CGGAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAG 160 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 |||| ||| |||||||| ||||| || ||||| | | |||||| || Sbjct 161 GTGGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTT 220 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | ||||| || || || || | |||||| || || |||||||| Sbjct 221 CCACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 Score = 104 bits (114), Expect = 2e-17 Identities = 163/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| |||||||| ||||| | || ||||| | ||| || ||||| || ||||| | Sbjct 270 CATT-CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGT 328 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | ||| | || || ||||| || || || || || || ||||||||||| | Sbjct 329 CAGAAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTG 388 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||||||||| ||||| ||| ||||| | | || || || Sbjct 389 GAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTT 448 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||||||||| ||||| ||||| || || | ||||| || || || ||||| Sbjct 449 CAACTTCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 Score = 95.1 bits (104), Expect = 8e-15 Identities = 115/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | |||||| || ||||| ||||| |||||||||||||| ||||||| Sbjct 500 TACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAG 559 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || || | ||||||||| ||||| || || | ||||| || | || Sbjct 560 ATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGG 619 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 | | ||||||||||| || ||| ||||||||| Sbjct 620 GAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATT 656 >seq153336 Length=250 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| || | ||||||||| || || | ||| ||||| || || || || | Sbjct 2 CATT-CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGT 60 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 | |||| || | || || | ||| |||||||| || || | | |||||| || | Sbjct 61 CCGACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTG 120 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 || | |||||| ||||| ||| ||| ||| ||||| | || ||||| | || Sbjct 121 GAGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTT 180 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||||||| ||||||||||| || || | ||||| || || || ||||| Sbjct 181 CCACTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 >seq142030 Length=677 Score = 95.1 bits (104), Expect = 8e-15 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 19949 CTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGCGG 20008 |||| |||||||| ||||||| |||||| |||| |||||||||||||||||||||| || Sbjct 605 CTCTTTTCAAAGTGCTTTTCATCTTTCCTTCACAGTACTTGTTCGCTATCGGTCTCTCGC 546 Query 20009 TAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 545 CAATATTTAGCTTTA 531 >seq76853 Length=1109 Score = 91.5 bits (100), Expect = 1e-13 Identities = 338/521 (65%), Gaps = 29/521 (6%) Strand=Plus/Plus Query 6811 ACCTGACTGAGAGTACCAAGTCTATGACGTTGAACGAAGACATGGaaaaaaaCCAAAAGC 6870 ||||||| ||| | ||||| |||||| || ||| || | || || ||| | |||| Sbjct 265 ACCTGACGGAGGGCGCCAAGAGCATGACGCTGTCCGAGGATAGCGAGAAGAACGAGAAGC 324 Query 6871 AACGTTTGGACCTGTTCTATGTGTACCTCAAGCAGAA-GCACACCTCCGGCGATGTCTCG 6929 | || ||||| ||||||| || ||| |||||| || || | |||| |||| Sbjct 325 AGCGCATGGACATGTTCTACTCGTTCCTAAAGCAGCGCGCGGACG-CGGGCGCTGTC--- 380 Query 6930 GAACACAAAGTCGCTGCGGATCTGTTACACGAGGCTGAACGGTTAAAAGTGAAATCAAAG 6989 || ||| || || || | |||||||| || | | ||| | || Sbjct 381 --------AG-CGCCGCCGACGTGCTGCACGAGGCCACGCGCCTCGACGTGCGTGCCAAC 431 Query 6990 GCGCCGCTGGTGCTTTTTGAGGTGCTGGT-GCGTCCGGCCGCGCTGGCGTGCGATGTGCG 7048 || || || || || |||||||| || ||| ||| | |||| || ||| ||||| Sbjct 432 GCACCCCTCGTCGCCTTCGAGGTGCTCGTCGCG-CCGCGCACGCTTGCCGCCGACGTGCG 490 Query 7049 CAAGTACCGCGCGCTGTTGCTGCGCTTTACGCAACATGACCCGCGCGCGCAACGCGCCGT 7108 | ||||||| | |||||| | | | ||||||||||||| ||||| | Sbjct 491 CCGCCACCGCGCCACCCTCCTGCGCCTGGCCCGCGCGGACCCGCGCGCGCCCCGCGCTGC 550 Query 7109 TCT-CACTGCGCTTTGTGTGCTCGACACTGCG---------CTGCTGCCCAAAGTGGCCG 7158 || ||| ||||| | ||||| | | || || || || ||| | ||| Sbjct 551 CCTGCAC-GCGCTCACCGCGCTCGCCGCCGCAGAACCCACCCTCCTCCCGAAACTCCCCG 609 Query 7159 GCGCGCTTAAACTGCTGTACGACCTAGACATAGTACAAGAGAAAACGATCATGGAGTGGT 7218 ||| || || ||||| |||||||| ||||| || | ||| | | |||| ||| Sbjct 610 CCGCCCTCAAGCTGCTCTACGACCTGGACATCGTTGACGAGCGCGCCGTGCTGGACTGGG 669 Query 7219 TCCACAAGCCGTCGTGCAAG-ACTCTCAGCAAAGAAGTGATGGCTGACGTGCACCGCCGC 7277 | |||||| ||| | || || | | ||| || ||| |||| ||||||| || ||| Sbjct 670 CCGCCAAGCCCTCGCGAAAATACGCGCC-CAAGGAGGTGGTGGCCGACGTGCTGCGGCGC 728 Query 7278 GCGCAGCCCTTCCTGAACTGGCTGCAGCAAGCCGAGGATGA 7318 |||||||||||||| | ||||||||||| ||||| || || Sbjct 729 GCGCAGCCCTTCCTCGAGTGGCTGCAGCAGGCCGACGAGGA 769 >seq131538 Length=717 Score = 84.2 bits (92), Expect = 1e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 ||||||||||| | | || | |||||||| || || ||||||||||||||||| Sbjct 158 ACCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGA 99 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 || ||| | || || | ||| || |||||||| || | | ||||| || | || Sbjct 98 TAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGG 39 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245 | ||||||||||||| ||||||| ||| ||||| Sbjct 38 AATGCCTTCTTTGTCCTGAATTTTTGCCTTAACATT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333629581983194