Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq21365 259 4e-64 seq117972 132 4e-26 seq131538 109 5e-19 seq66322 109 5e-19 seq218964 104 2e-17 >seq21365 Length=2821 Score = 259 bits (286), Expect = 4e-64 Identities = 852/1303 (65%), Gaps = 40/1303 (3%) Strand=Plus/Plus Query 56979 CATAGTATTAAGTAGGTCGCCGTTGTCGGCATCTATCTCCCATGCAAACAAACCACCAAG 57038 ||| | ||| ||||| || ||||||||||| || || ||||| ||||| | |||||| || Sbjct 146 CATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCACCTAG 205 Query 57039 TTTCGAATTTACCACATACTTTGCTTTGTCCGTCACGGAATCTA-CACTGTCATAACTAA 57097 ||| |||| |||||| || | || || | || || |||| || ||||||| | | Sbjct 206 TTTGTTATTTCTCACATATTTACCCTTTTCAATAACTGA-TCTAGCATTGTCATAGGTTA 264 Query 57098 TCAAA---TCCTGTGTTTCGGCATCGAAAACGCTTGCTGCCTTGGCCACGCTGTCGTA-T 57153 ||| ||| || | | | ||| || | || | ||| || ||||||| | Sbjct 265 -CAAGGTCTCCAGTTGATGGTCT--GAAGACATAAGGAGCTTGGGCGACATTGTCGTAAT 321 Query 57154 GAGTATGTGTATCGACCTCGGTTTATTTCGCTTGCAATTTGCTTGTAATCAACCACGCCT 57213 || | | | ||| | ||||| | ||||| | ||||||||||||| || Sbjct 322 GAAATTCCCACTTG-CCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCCG 380 Query 57214 TCCTCCCACGTGCCGTGCACAGGCCCACTTCCTTTACCCGTGAACGGATTGTTGTCCGTG 57273 || | ||| || || | ||||| ||| | | || || ||||| ||| ||||||| | Sbjct 381 TCTTGCCAAGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTCG 440 Query 57274 TAGTCGTGCACACCCGTCCATCCTCGACCGTACATGGCCACGCCAACCACTATTTTGTCA 57333 || || || || || ||||| || ||||| |||||||| || || | || || || | | Sbjct 441 TAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTCTTA 500 Query 57334 GCGGACACGTTCTGCGCTAACAAAGTGCGTACAGCATTGTCTGTGGTATATGGTTCGCTA 57393 | ||| ||| || ||||| ||| | ||| | || || | ||| | Sbjct 501 GGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTCCTTG 560 Query 57394 GGGTTCCACAGAGGCGCATA-AATGTTGGTTTGATAGCCCAAATTTGTGTTACTCCAGGC 57452 || ||||| |||||| || |||| | ||||||| || | | | || |||||| Sbjct 561 GGATTCCATGCAGGCGCGTACAATGGT-GTTTGATGTCCAAGAGTATCATTTGACCAGGC 619 Query 57453 ACCTTTAAAATCGTACGACATTAAGAATATGCTGTCGAGATATTTTTGCGCATGATTGTA 57512 || || || || || ||| ||||| || || | ||| ||||| || | ||| Sbjct 620 TCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCGTA 679 Query 57513 ATCGACAAGTTCGATTTTATCATTACCGGCGCCGATGGCTGTTGTGAGCAATAGT-TTAC 57571 || |||| || ||||||||| || | || || || | || | | | || || | Sbjct 680 GTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCA--ATTCGTATTTC 737 Query 57572 GATCAGTTTCCAG-TTCCAACTCGTCCAACATTAATCTCAAATCTTTCAATAGCCGCACG 57630 | || || | | ||| || | ||| | || ||||||| | | || Sbjct 738 TTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACA 797 Query 57631 TATGTTTCTCCGTCGCGACCAGGGTCGCCCAACAAAGGATTAGCACCATTACCACCAGGA 57690 || || || || | ||| || | ||| |||||||| |||||||||||| Sbjct 798 TAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTACCACCAGGA 854 Query 57691 AATTCCCAATCAATGTCGACTCCATCAAAAAATTTCCACACTTTGATGTAGTCGCGCACC 57750 || |||||||| || || || ||||| || |||||||| | || | || || Sbjct 855 AACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTTTACT 914 Query 57751 GATTGCACAAA-AGTGTTGCGAATAGTGTCGTCGTGCATGAAAAAGAAGGGATCCGATAA 57809 || |||||||| ||||| | ||| | ||| | || ||||| ||||| | | Sbjct 915 GACTGCACAAATCGTGTT-CTTTTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAG 973 Query 57810 GGTCCAACCACCAATGGATGGCAATACTTTTAGATGC-GGATATGCTTTTTTGACCGCCA 57868 ||||| |||||||| || || || | | || || | || |||| ||| | | || Sbjct 974 CGTCCACCCACCAATCGA-GGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACA 1032 Query 57869 TCAGTTGACCAAAATTACCTTTGTAAGGTTCGTTCCAAGCCGATACTCCTTGTTGAGGCT 57928 | | ||| ||||| || |||||||| || |||||||| | || | ||||| ||| || | Sbjct 1033 TTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTT 1092 Query 57929 TTTGTAGCGCCGCCCAAGGATCGTGTATCGTTACTTTGAAATCTTCTCGGCCTGCACACG 57988 |||||| || ||||| |||||||| || | |||||||| || || ||||| ||| | Sbjct 1093 TTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTACAGG 1152 Query 57989 AACGTTGCAACGCTTCAAAACTACCTGTAATCGTCTTTAGACTGTCGTTGATGCCATCGC 58048 | ||||||| |||| ||||| ||| ||| |||| || || || ||||| || | Sbjct 1153 ACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTATGCCGTCAC 1212 Query 58049 CTCCGCAAATAGGCACGAAACCGTACAACAAATGAGTCAAATTGGGTACGGGTACTTTAT 58108 | |||||||| || | || || || | ||||||||| | ||| |||| |||| || Sbjct 1213 CGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGAT 1272 Query 58109 CAACTGGATATTTACGACCGTACACACTCCACTCCACGAAATAAGCTCCCACGATCAATT 58168 | || || |||| | | ||| |||| ||| || ||||| || || |||| ||| | Sbjct 1273 CCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCA----CAACT 1328 Query 58169 TTTGGTCTGGTGACAAAGGTT--CATGA--GGTTTATTGTTTTCTTGCCAAGTATAGTGC 58224 ||| || | ||| | ||| |||||||| |||||| | | ||||| | | Sbjct 1329 TTT---------CCAGATGTTTGCTTGAATGGTTTATTTTTTTCTCCCAATGTATATTCC 1379 Query 58225 AGAGGTTGTAGGTGAGCTCCGTCAGTGTCGGCAACGACAATTT 58267 | ||| ||| ||| ||| ||||| ||||| |||||||||| Sbjct 1380 AAAGGAAGTAAATGACTTCCATCAGTATCGGCCACGACAATTT 1422 >seq117972 Length=685 Score = 132 bits (146), Expect = 4e-26 Identities = 159/213 (75%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || ||||| || || | || || || |||| || | |||||||| | || Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 ||| ||||| || | || |||| |||| || |||||||| || || |||||||| Sbjct 213 TGATACTATTGAA--AATGTAAAAGCTAAAATCCAA-GACAAAGAGGGCATCCCACCTGA 157 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||||| |||| ||||| || || ||||| ||||||| ||||||| | |||||| Sbjct 156 TCAGCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTA 97 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||| |||||||||||||| || || ||||| || Sbjct 96 CAACATTCAAAAAGAATCTACTCTTCATTTGGT 64 Score = 125 bits (138), Expect = 6e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || || | || || ||| | || || | ||||| || | ||| Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || || | ||| |||||| ||||||||||| ||||| || || ||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || ||||||| || ||||| ||||| ||||||| ||| || | || ||||| Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || ||||||||||| || | |||||||| || | ||||||| |||| Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGAA 272 Score = 116 bits (128), Expect = 3e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||||||||| || ||||| ||| ||| ||||||||||| ||||| || ||| Sbjct 671 TCTGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGAC 612 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||| || | |||||||| || |||||| | ||||||| || || | ||||| Sbjct 611 CAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTAT 552 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGT 25207 ||||||||||| ||||| || ||||||||||| Sbjct 551 AATATTCAAAAGGAATCTACTCTACATTTAGT 520 >seq131538 Length=717 Score = 109 bits (120), Expect = 5e-19 Identities = 113/147 (77%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 25079 GCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGG 25138 ||||||| ||| ||||||||||| ||||| || ||||||||| || | ||||||||||| Sbjct 12 GCAAAAATTCAG-GACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTTTTGCCGG 70 Query 25139 CAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCT 25198 || ||| | ||||||| || || | |||||||||||||| |||||||| || || Sbjct 71 TAAGCAACTTGAAGATGGACGAACATTATCTGATTACAATATTCAGAAAGAATCTACTCT 130 Query 25199 ACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || | || || || || ||||| || Sbjct 131 TCACCTTGTTCTCAGACTGAGAGGTGG 157 >seq66322 Length=2150 Score = 109 bits (120), Expect = 5e-19 Identities = 145/197 (74%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149 ||| |||||| || ||||| | || || || ||||||||||| || | | || || Sbjct 2071 ACCAACATAACCATTTGGATCTCTGCCGTCAACACTGTAATGATCATTCAAGTAAATAGC 2012 Query 51150 ATAACCCAATGCCATGTCTGCACTAG-GCGTCCATTCCATAATTTTCTTGGCCCAGTACA 51208 ||| ||| ||| ||| | | | | |||||||||| ||| |||||| |||||||| Sbjct 2011 ATACTTCAAAGCC-TGTTCGGGCGACTGGGTCCATTCCAAAATCTTCTTGCACCAGTACA 1953 Query 51209 TGCGCATGTAACCGTGCATCTTGCCCTC--GCAACGAAGCTGCGCTTGAGCCGAGTTCCA 51266 |||| | | |||| |||||||||||||| || | ||||| |||||| |||||||| Sbjct 1952 TGCGTAGGAAACCATGCATCTTGCCCTCTTTCACC--AGCTGTATTTGAGCTGAGTTCCA 1895 Query 51267 CAATTCGTCGTGAGTTT 51283 || |||||||| |||| Sbjct 1894 TAAGTCGTCGTGTGTTT 1878 >seq218964 Length=932 Score = 104 bits (114), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 6/207 (3%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || || || | || |||||| |||| || | ||||| || | || Sbjct 639 AATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTC 698 Query 25058 TGACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 |||||||| || | || |||| |||| ||| ||||| ||||| ||||| || || Sbjct 699 CGACACTATTGAA--AATGTAAAAGCGAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 755 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 ||||| || | ||||| || || || ||||| ||||| | |||||| | || || Sbjct 756 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTA 815 Query 25175 CAATATTCAAAAAGAATCCACGCTACA 25201 ||| |||||||||||||| || || || Sbjct 816 CAACATTCAAAAAGAATCTACTCTTCA 842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431623370792810