Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq213871 156 5e-33 seq197295 141 1e-28 seq156627 89.7 6e-13 >seq213871 Length=423 Score = 156 bits (172), Expect = 5e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 ||||||||||| ||||| || || | || |||||||| || | |||||||||||||||| Sbjct 334 TCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTTTCAACCAAAATATTGAAGCA 275 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 || || || || |||||||| || || || || ||||| || | ||||||||| |||| Sbjct 274 AAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGCGATAATACGTTCTCCAAAT 215 Query 93254 TTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGT 93313 | || | || |||| |||||| | ||| ||||| || || || ||||||||||| ||| Sbjct 214 GTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTGCCTTCTTCTTAATACATGGT 155 Query 93314 AGTGTTTCGATAGCGTTAAATAGGTAATC 93342 || || || || || || || | | |||| Sbjct 154 AGAGTCTCAATTGCATTGAACAAGAAATC 126 >seq197295 Length=1118 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 93355 ATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGC 93414 ||| | ||| || || || ||||| | ||| ||||| || ||||| ||||| ||||| || Sbjct 737 ATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGC 678 Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 |||||| || || ||||| || || ||||| || | || || ||||| || || | ||| Sbjct 677 AATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAGAAACGCTC 618 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 || | || ||||| || |||||||| || || ||||| || || || | ||| || || Sbjct 617 CACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGAT 558 Query 93535 AAAATGTTTCTCATCATCTTTAAGCTTATCCCAATC 93570 |||||||||||| |||||| | | |||||||| Sbjct 557 AAAATGTTTCTCGCAATCTTTTAATGTCTCCCAATC 522 Score = 134 bits (148), Expect = 2e-26 Identities = 109/132 (83%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 93590 TCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCT 93649 || |||||||| ||||||||||||||||||| |||||||| ||||| | ||||||||| Sbjct 384 TCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCTGCCATATGTCG 325 Query 93650 TGATATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCTAGT 93709 ||||||| ||||| ||||| || ||||| ||||||| ||| | | | ||||| ||| Sbjct 324 GGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACAGAGGCTCAAGT 265 Query 93710 TGTGGGTCAAAC 93721 |||||||||||| Sbjct 264 TGTGGGTCAAAC 253 >seq156627 Length=1589 Score = 89.7 bits (98), Expect = 6e-13 Identities = 95/125 (76%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 92742 TTAGAAATCTGCATCTAGTGTAAATACATTGTCAAGTGGATTCTTATTCATAACACCACA 92801 ||| || |||||||||| ||||| |||||||| | || | | ||| || || || Sbjct 520 TTAAAATTCTGCATCTAAAGTAAACACATTGTCCATAGGTTGCGC---CATCACTCCCCA 464 Query 92802 TTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTCCAAAGATATCGA 92861 ||||||||||| |||||||| || |||||||| ||||| || |||||||| || || Sbjct 463 CTTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAG 404 Query 92862 ATTCA 92866 ||||| Sbjct 403 ATTCA 399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 554614047651760