Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq218964 181 2e-40 seq153336 181 2e-40 seq117972 154 3e-32 seq25413 138 2e-27 seq117971 100 5e-16 seq131538 98.7 2e-15 seq149208 84.2 4e-11 >seq218964 Length=932 Score = 181 bits (200), Expect = 2e-40 Identities = 191/250 (76%), Gaps = 1/250 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || |||||||||| ||| || || || |||||||| ||||| || || | Sbjct 868 TTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTG 809 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | || ||||| || ||||| || ||||| || | | |||||| || || | Sbjct 808 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 749 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||||||||||||||||||||| || || || || || || ||||| | | ||| | Sbjct 748 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCTAT-TA 68471 ||||||| || |||||||| |||||||| || || ||||| ||||||||| || ||| | Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGATATCTG 629 Query 68472 TACCCAAGTA 68481 || | ||||| Sbjct 628 TAACAAAGTA 619 >seq153336 Length=250 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || | || ||||| || ||||| | || || || || ||||||||||| || | Sbjct 4 TTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCG 63 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | ||||| | ||||||||| | ||||| |||||||| || | |||||||||||| || | Sbjct 64 ACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAG 123 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 ||||||||||||||||||||||||||||||| || ||||| || || | | ||| | Sbjct 124 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCA 183 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| || || || |||||||| || || || || || || || |||||| Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCATT 233 >seq117972 Length=685 Score = 154 bits (170), Expect = 3e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || ||||| ||||||||||| || || || || |||||||| ||||| ||||||| Sbjct 44 TTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGG 103 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||||| || ||||| || || || || || | || || || |||| Sbjct 104 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTG 163 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| || |||||||| || || || || || || || || || | | ||| | Sbjct 164 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 223 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||||| || ||||| ||||| || ||||| || || || ||||||||| Sbjct 224 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 Score = 140 bits (154), Expect = 6e-28 Identities = 140/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || ||||| |||||||| || ||||| || || || ||||| || |||||||| || Sbjct 502 CCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGAT 561 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | |||||||| | || || || || || ||||| || |||||||| || ||| Sbjct 562 AGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGA 621 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| ||||||||||| || || || ||||| | || |||||| Sbjct 622 ATACCTTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTCTACC 681 Query 68415 TC 68416 || Sbjct 682 TC 683 Score = 136 bits (150), Expect = 7e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 68252 TACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 ||| || || | || || |||||||||||||| || || || ||||| | |||||||| Sbjct 291 TACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTC 350 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 || ||||| || ||||| || || | |||||| || || ||||||||||| |||||||| Sbjct 351 CAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTG 410 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 || || ||||| || || || ||||| | | ||| ||||| || || || ||||| Sbjct 411 GATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTT 470 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || || || || || || ||||| Sbjct 471 GCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 >seq25413 Length=1171 Score = 138 bits (152), Expect = 2e-27 Identities = 192/269 (71%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 268211 CCAGTTGCAATCACAAAGTCCTCTGGCTCAGGAGACTGGAGCATTTTCCACATTGCTTCG 268270 || || || | |||||||||||| ||| | ||| ||||| |||||| || || Sbjct 534 CCCGTGGCCACCACAAAGTCCTCGGGCGCGTCCTGCTGCAGCATGAGCCACATGGCCTCC 475 Query 268271 ACATAGTCCCGCGCATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCAT 268330 |||||||| ||||| |||||||| |||||||| ||| | || ||||| ||| Sbjct 474 ACATAGTCGCGCGCGTGGCCCCAGTCGCGCTTGCTGTCGAGATTGCCGAGCTCGAGGTGC 415 Query 268331 TTCTGCTTGCCGAGCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTC 268390 | |||||| | | || | || || ||||| || || |||||||| || Sbjct 414 GACAAAAGGCCGAGGTGTATCTTGGCGACGCCCCGCGTGATCTTGCGCGTCACGAAGTTC 355 Query 268391 TCGCCACGTAGAGGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATAT 268450 ||||| || | ||||||||||| ||||| || | |||||||||||||||||||| || Sbjct 354 TCGCCGCGGCGTGGGCTCTCGTGATTGAACAGAAGCCCGTTGCACGCGAACATGCCGTAC 295 Query 268451 GCCTCACGGTAGTTCACGACCGTCCAGTA 268479 ||||| || |||||||| || ||||||| Sbjct 294 GCCTCGCGATAGTTCACCACTATCCAGTA 266 >seq117971 Length=252 Score = 100 bits (110), Expect = 5e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391 |||| | |||||||| || || ||||||||||| || || || || ||||| || || Sbjct 252 TGAGACGCTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCT 193 Query 68392 CGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGA 68451 |||| ||||| | || ||||||||||| ||| ||||| ||||| || | || || || | Sbjct 192 CGATTGTGTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAA 133 Query 68452 ATATCTGCAT 68461 |||| ||||| Sbjct 132 ATATTTGCAT 123 Score = 84.2 bits (92), Expect = 4e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||| | || || || ||||| ||||||||||| || || || Sbjct 121 CCACCTCGCAGACGTAGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGAT 62 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | ||||||||| |||||||| ||||| || ||||| | |||||| || || ||| Sbjct 61 AAAGTACGCCCATCTTCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGGGGGA 2 Query 68355 A 68355 | Sbjct 1 A 1 >seq131538 Length=717 Score = 98.7 bits (108), Expect = 2e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 68258 GTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTG 68317 ||| || || || ||||| || || || ||||| || | ||| | |||||||| | || Sbjct 134 GTGAAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTG 75 Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| ||||| || || | || |||||||| || ||||||||||| ||||| ||||| || Sbjct 74 CTTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGAATTTT 15 Query 68378 TGCCTTGAC 68386 |||||| || Sbjct 14 TGCCTTAAC 6 >seq149208 Length=369 Score = 84.2 bits (92), Expect = 4e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || ||||||||||| | ||||||||||| || || || || || ||| Sbjct 121 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 62 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| || || | |||||| || || ||| Sbjct 61 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 2 Query 68355 A 68355 | Sbjct 1 A 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917903953143280