Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq21365 237 1e-57 seq117972 113 3e-20 seq131538 91.5 1e-13 seq153336 89.7 4e-13 >seq21365 Length=2821 Score = 237 bits (262), Expect = 1e-57 Identities = 418/597 (70%), Gaps = 29/597 (5%) Strand=Plus/Plus Query 84237 GGGTTGGCTCCTTTGCCTCCCGGAAATTCCCAATCGATGTCTACACCGTCGAAAAATTTC 84296 ||||| || ||||| || || ||||| ||||||||||| |||||||| ||||| |||||| Sbjct 831 GGGTTAGCACCTTTACCACCAGGAAACTCCCAATCGATATCTACACCATCGAAGAATTTC 890 Query 84297 CATACTTGTAAAAACTCCTTAACCGAATTTACAAAAACGT-TTCTTTTTTCAACATTGTG 84355 ||| | | | ||||||||| || || | ||||| ||| ||||||| | ||| || Sbjct 891 CATGTTAGGAGAAACTCCTTTACTGACTGCACAAAT-CGTGTTCTTTT----AGATT-TG 944 Query 84356 CATGAAATAAAACG------GGTCCGACAA-CGTCCATCCTCCTATGGACGGAAGAATCT 84408 | || ||||| | || || ||| |||||| || || || || |||||||||| Sbjct 945 --TCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCT 1002 Query 84409 ----TTAGGTGCGGGTTCGCCAATTTAGCTGCCATCAATTGTCCAAAATTGCCTTTATAC 84464 || | ||||| | | ||||| || ||| ||||| ||||| |||||||| || Sbjct 1003 TCAATTCAGGGCGGGCTTG---TTTTAG-TGACATTAATTGGCCAAAGTTGCCTTTGTAG 1058 Query 84465 GGTTCGTTCCAAGCGGACACGCCCTTTTGGGGCTTTTGTACGGCGGCCCACGGATCGTGG 84524 || |||||||| | |||| || ||||| || ||||||| || ||||| ||||||||| Sbjct 1059 GGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGG 1118 Query 84525 ATGGCAATTTTAAAATCCGCACGTCCCCTGCACGATCGTTGCAGAGATTCGAAACTACCG 84584 || | | ||| || ||| |||| || || || || |||||||| | || |||||| || Sbjct 1119 ATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCT 1178 Query 84585 GGTATCACTTTGAGAGC-ATCGTTTATTCCATTACCGCCGCAAATGGGTATGAAACCGTA 84643 ||| |||| | ||| ||| ||||| || | ||||||||||||||| || || || || Sbjct 1179 TCGATCTCTTTTA-AGCTATCATTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATA 1237 Query 84644 CAACAAGTGTGATAAATTTGGCAAGGGAACTTTGTCTACGGGAAAATTGCGCCCGTACAC 84703 | ||| || | | ||| || | || | || ||||| || || | ||| || Sbjct 1238 GAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGAC 1297 Query 84704 TCCCCATTCAACAAAATACGCAGCAACCGTTTTATCGTCTCTT---CTGCCCGGTTTGTT 84760 |||||||| || || || || | || ||| | | || || ||||| || Sbjct 1298 ACCCCATTCTACGAAGTAGGCGCCCACAACTTTTCCAGATGTTTGCTTGAATGGTTTATT 1357 Query 84761 GTTTTCCCGCCATGTATATTCCAGCGGAGCCAAATGACCGCCGTCGGTGTCTGCCAC 84817 ||||| | | |||||||||||| ||| ||||||| || || || || ||||| Sbjct 1358 TTTTTCTCCCAATGTATATTCCAAAGGAAGTAAATGACTTCCATCAGTATCGGCCAC 1414 Score = 86.0 bits (94), Expect = 4e-12 Identities = 81/101 (80%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 83551 TGTTCATCGCGTTGAGCAAATCGCCGTTGTCGGCATCGATCTCCCAAGCAAACAGGCCGC 83610 ||||||| || || || | ||| ||||||||||| ||||| ||||||||||| || || | Sbjct 142 TGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCAC 201 Query 83611 CTAGTTTGTT-TCGATCGACATATTTAACCTTTCCTAAAAC 83650 |||||||||| | || ||||||||| ||||| | | ||| Sbjct 202 CTAGTTTGTTATTTCTC-ACATATTTACCCTTTTCAATAAC 241 >seq117972 Length=685 Score = 113 bits (124), Expect = 3e-20 Identities = 165/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 |||||| || ||| ||||||| |||| || || |||||||| ||||| |||| || | Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGT---ACCTGTAAA 21949 || || | | || | || ||||| || |||||||| | ||||| | Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTG---A 157 Query 21950 CCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTA 22009 || ||| | |||||||||||||| || ||| | |||||| ||| | ||||||| Sbjct 156 TCAGCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTA 97 Query 22010 CAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 ||| ||||| || ||||||||||||||| ||||||| ||| | || || ||| Sbjct 96 CAACATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGA 45 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 21927 GATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAA 21986 || ||||| ||| | || | |||||||||| || || |||||||| |||||||| ||| Sbjct 635 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 576 Query 21987 GATTTAA--AAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCATATGGTAT 22044 ||| | ||||| | ||||| |||||||| |||||||||||||| ||| | |||| Sbjct 575 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 518 Query 22045 TACGTTTACGAGGAGG 22060 | ||| | || || || Sbjct 517 TGCGTCTTCGTGGTGG 502 >seq131538 Length=717 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 21907 ATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAACAGAGACTTATCT 21966 || ||||| ||||||| || ||||| || | ||| | |||||||||| | || | Sbjct 4 ATGTTAAGGCAAAAATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTT 63 Query 21967 TTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAATATTCAGAAGGAAT 22026 |||| || || ||||| |||||| | ||| | | ||||||||||||||||| |||| Sbjct 64 TTGCCGGTAAGCAACTTGAAGATGGACGAACATTATCTGATTACAATATTCAGAAAGAAT 123 Query 22027 CTACTCTTCA 22036 |||||||||| Sbjct 124 CTACTCTTCA 133 >seq153336 Length=250 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 21833 AATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGC 21892 ||||||||| ||| | |||||| |||| || ||||| ||||| | ||| |||||| | Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 21893 AGAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCA 21952 || || | | || ||||| ||| ||| || || || || | ||| | |||| Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 21953 ACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAA 22012 ||| ||| | || || || || || ||||| |||||| || || | || || || Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54 Query 22013 TATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || ||||||||||||||| | || | || || ||| || | || ||| Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGGA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356716005751996