Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 205 8e-48
seq117972 145 6e-30
seq218964 136 3e-27
seq153336 104 2e-17
seq131538 96.9 3e-15
>seq21365
Length=2821
Score = 205 bits (226), Expect = 8e-48
Identities = 460/681 (68%), Gaps = 35/681 (5%)
Strand=Plus/Minus
Query 20272 AAAGGAGGCAAATACAACATGACCGTGAAACTTTGCAATGTTGACGGCTG---TTCAA-C 20327
||||| || | |||| | ||||| ||| |||||||||||| |||||||| ||||| |
Sbjct 1492 AAAGGTGGAAGATACCAAATGACAGTGGAACTTTGCAATGAAGACGGCTGCAGTTCAAGC 1433
Query 20328 AAGC--AGCGCGGTTCAGGTCACCATCGCCGACACCGATGGATCTCATTTAAAACCTTTG 20385
| | | || || ||| | ||||| || |||||| ||||||| ||||||
Sbjct 1432 GATCCCACCGAAATT---GTCG---TGGCCGATACTGATGGAAGTCATTTACTTCCTTTG 1379
Query 20386 ATTTATGACTACATTG----AAAACAATAAACGTTTCGAG-AAGCGTACCGATAAAATCA 20440
||| |||||| |||| ||||||| ||| || || | | || ||| |
Sbjct 1378 GAATAT----ACATTGGGAGAAAAAAATAAACCATTCAAGCAAACATCTGGA-AAAGTTG 1324
Query 20441 TTGCTGCATATTTTGTAGAATGGGGCGTTTATCCTAGACAATTTCCCGTCGACAAGGTAC 20500
| | || || || ||||||||||| || || ||||| |||| ||||| || |||
Sbjct 1323 TGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATAC 1264
Query 20501 CCGTTCCCAATTTGTCTCATCTGCTATATGGCTTTGTGCCAATTTGCGGCGGAGATGGTA 20560
| | || ||| | ||||| |||| ||||||||| | || ||||||||||| || || |
Sbjct 1263 CTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCA 1204
Query 20561 TCAACGAC-GCGTTAAAGTTGTCCCAGCCGGATAGTTATTTAGCTTTGCAACGTTCGTGC 20619
| || || || | |||| || || | |||| ||| ||||||| || ||
Sbjct 1203 TAAATGATAGCTTAAAAGAGATCGAAGGC----AGTTTCCAAGCACTGCAACGGTCCTGT 1148
Query 20620 GCGGGCCGAGATAATTTTAAAGTTGCCATACACGATCCTTGGGCCGCTCTACAGAAACCA 20679
||||| || | || ||||| | || |||||||| ||||| || |||| ||||||
Sbjct 1147 AGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCA 1088
Query 20680 CAAAAAGGAGTATCCTCTTGGAACGAACCGTACAAAGGAAACTTTGGTCAGTTGATGGCA 20739
||||||||| | || || |||||||| || |||||||| |||||||| || || ||| ||
Sbjct 1087 CAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCA 1028
Query 20740 ACGAAACTGGCGTATCCTCATCTTAAAGTGCTACCTTCGATCGGCGGGTGGACTTTATCC 20799
|||| || ||| | | || | || || ||||| || |||||||| | ||
Sbjct 1027 CTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCC 968
Query 20800 GATCCGTT----TTATCATATGCACGATCCGATCGTACGCCAAGTTTTCATCGATTCTGT 20855
||||| || || | | || ||| | | || | | || | | || ||
Sbjct 967 GATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGA----TTTGTGCAGTCAGT 912
Query 20856 GGAAGAGTTTTTGTTGACGTGGAAATTCTTTGACGGCGTTGACATAGACTGGGAGTTTCC 20915
| |||||| | | || ||||||||||| || || || || || || |||||||||||
Sbjct 911 AAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCC 852
Query 20916 GGGAGGCAAAGGTGCGAATCC 20936
|| || |||||||| || ||
Sbjct 851 TGGTGGTAAAGGTGCTAACCC 831
>seq117972
Length=685
Score = 145 bits (160), Expect = 6e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || ||||| || | ||| || ||||| | |||||||||||||||||||||||||||
Sbjct 43 ATTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCG 102
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| ||| |||||| | ||| |||||||| |||| || ||||| || || ||
Sbjct 103 GAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGT 162
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| ||||| |||||||| || || ||||| | ||||| || || | || |||
Sbjct 163 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 222
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | || || || || || ||||| ||||||||||||||
Sbjct 223 ACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233
|||||||| | |||||||||||||| |||||||| || | |||||| ||||||
Sbjct 292 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCC 351
Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293
| ||| || || ||| | || ||||| ||||| || ||||||||||||||||||||
Sbjct 352 AATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 411
Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353
|| || |||| | ||||| ||||| | || ||| || || | || | ||||||
Sbjct 412 ATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTG 471
Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || || ||||| |||||||| |||||
Sbjct 472 CCAGTAAGTGTTTTAACAAAAATTTGCAT 500
Score = 118 bits (130), Expect = 9e-22
Identities = 128/170 (75%), Gaps = 0/170 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | ||| |||||||||| |||||||| |||||||| || |||||
Sbjct 499 ATACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCA 558
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||||| |||||| |||||||| ||||| | ||||| | ||||||||| ||
Sbjct 559 GATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGG 618
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTC 114322
||||| ||||||||||| |||||| || | | ||||| |||||
Sbjct 619 GGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTC 668
>seq218964
Length=932
Score = 136 bits (150), Expect = 3e-27
Identities = 168/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || |||||||| | ||| || | || | ||||||||||||||||||||||| ||
Sbjct 869 ATTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCT 810
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| ||| || ||||| | ||| || |||||| | || | ||| ||||| || |||
Sbjct 809 GAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 750
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||| || ||||| | ||||| ||||||| | |||
Sbjct 749 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 690
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| |||| || | ||||| || || || ||||| || |||||||||||
Sbjct 689 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq153336
Length=250
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
|| || || | ||| | ||| ||||| || | |||||||| || || ||||| || ||
Sbjct 3 ATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCC 62
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
|| || || |||||| ||||| || || ||| | || | | |||||||| |||
Sbjct 63 GACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGA 122
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
||||||||||| ||||| ||||||| || | | ||| | || || | | |||
Sbjct 123 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCC 182
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382
|| || | || | ||||| || || || |||||||||||||| |||||
Sbjct 183 ACTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
>seq131538
Length=717
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/140 (76%), Gaps = 2/140 (1%)
Strand=Plus/Minus
Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210
||| ||| || | ||||| | ||| | || | ||||||||||| ||||| |||||||
Sbjct 162 AAACACCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAAT 103
Query 114211 C-GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269
| | | || || || |||||||||||| ||||| || | || | | |||||||||
Sbjct 102 CAGATAAT-GTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCT 44
Query 114270 GGAGGAATGCCTTCTTTGTC 114289
||||||||||||||||||||
Sbjct 43 GGAGGAATGCCTTCTTTGTC 24
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 418481671883688
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |