Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq21365 205 8e-48 seq117972 145 6e-30 seq218964 136 3e-27 seq153336 104 2e-17 seq131538 96.9 3e-15 >seq21365 Length=2821 Score = 205 bits (226), Expect = 8e-48 Identities = 460/681 (68%), Gaps = 35/681 (5%) Strand=Plus/Minus Query 20272 AAAGGAGGCAAATACAACATGACCGTGAAACTTTGCAATGTTGACGGCTG---TTCAA-C 20327 ||||| || | |||| | ||||| ||| |||||||||||| |||||||| ||||| | Sbjct 1492 AAAGGTGGAAGATACCAAATGACAGTGGAACTTTGCAATGAAGACGGCTGCAGTTCAAGC 1433 Query 20328 AAGC--AGCGCGGTTCAGGTCACCATCGCCGACACCGATGGATCTCATTTAAAACCTTTG 20385 | | | || || ||| | ||||| || |||||| ||||||| |||||| Sbjct 1432 GATCCCACCGAAATT---GTCG---TGGCCGATACTGATGGAAGTCATTTACTTCCTTTG 1379 Query 20386 ATTTATGACTACATTG----AAAACAATAAACGTTTCGAG-AAGCGTACCGATAAAATCA 20440 ||| |||||| |||| ||||||| ||| || || | | || ||| | Sbjct 1378 GAATAT----ACATTGGGAGAAAAAAATAAACCATTCAAGCAAACATCTGGA-AAAGTTG 1324 Query 20441 TTGCTGCATATTTTGTAGAATGGGGCGTTTATCCTAGACAATTTCCCGTCGACAAGGTAC 20500 | | || || || ||||||||||| || || ||||| |||| ||||| || ||| Sbjct 1323 TGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTATAC 1264 Query 20501 CCGTTCCCAATTTGTCTCATCTGCTATATGGCTTTGTGCCAATTTGCGGCGGAGATGGTA 20560 | | || ||| | ||||| |||| ||||||||| | || ||||||||||| || || | Sbjct 1263 CTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCA 1204 Query 20561 TCAACGAC-GCGTTAAAGTTGTCCCAGCCGGATAGTTATTTAGCTTTGCAACGTTCGTGC 20619 | || || || | |||| || || | |||| ||| ||||||| || || Sbjct 1203 TAAATGATAGCTTAAAAGAGATCGAAGGC----AGTTTCCAAGCACTGCAACGGTCCTGT 1148 Query 20620 GCGGGCCGAGATAATTTTAAAGTTGCCATACACGATCCTTGGGCCGCTCTACAGAAACCA 20679 ||||| || | || ||||| | || |||||||| ||||| || |||| |||||| Sbjct 1147 AGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCA 1088 Query 20680 CAAAAAGGAGTATCCTCTTGGAACGAACCGTACAAAGGAAACTTTGGTCAGTTGATGGCA 20739 ||||||||| | || || |||||||| || |||||||| |||||||| || || ||| || Sbjct 1087 CAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCA 1028 Query 20740 ACGAAACTGGCGTATCCTCATCTTAAAGTGCTACCTTCGATCGGCGGGTGGACTTTATCC 20799 |||| || ||| | | || | || || ||||| || |||||||| | || Sbjct 1027 CTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCC 968 Query 20800 GATCCGTT----TTATCATATGCACGATCCGATCGTACGCCAAGTTTTCATCGATTCTGT 20855 ||||| || || | | || ||| | | || | | || | | || || Sbjct 967 GATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGA----TTTGTGCAGTCAGT 912 Query 20856 GGAAGAGTTTTTGTTGACGTGGAAATTCTTTGACGGCGTTGACATAGACTGGGAGTTTCC 20915 | |||||| | | || ||||||||||| || || || || || || ||||||||||| Sbjct 911 AAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCC 852 Query 20916 GGGAGGCAAAGGTGCGAATCC 20936 || || |||||||| || || Sbjct 851 TGGTGGTAAAGGTGCTAACCC 831 >seq117972 Length=685 Score = 145 bits (160), Expect = 6e-30 Identities = 170/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | ||| || ||||| | ||||||||||||||||||||||||||| Sbjct 43 ATTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCG 102 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| | ||| |||||||| |||| || ||||| || || || Sbjct 103 GAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGT 162 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| |||||||| || || ||||| | ||||| || || | || ||| Sbjct 163 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 222 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || || ||||| |||||||||||||| Sbjct 223 ACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 114174 ACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCA 114233 |||||||| | |||||||||||||| |||||||| || | |||||| |||||| Sbjct 292 ACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCC 351 Query 114234 AGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCA 114293 | ||| || || ||| | || ||||| ||||| || |||||||||||||||||||| Sbjct 352 AATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGG 411 Query 114294 ATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTG 114353 || || |||| | ||||| ||||| | || ||| || || | || | |||||| Sbjct 412 ATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTG 471 Query 114354 CCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || ||||| |||||||| ||||| Sbjct 472 CCAGTAAGTGTTTTAACAAAAATTTGCAT 500 Score = 118 bits (130), Expect = 9e-22 Identities = 128/170 (75%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | ||| |||||||||| |||||||| |||||||| || ||||| Sbjct 499 ATACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCA 558 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||||| |||||| |||||||| ||||| | ||||| | ||||||||| || Sbjct 559 GATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGG 618 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTC 114322 ||||| ||||||||||| |||||| || | | ||||| ||||| Sbjct 619 GGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTC 668 >seq218964 Length=932 Score = 136 bits (150), Expect = 3e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || |||||||| | ||| || | || | ||||||||||||||||||||||| || Sbjct 869 ATTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCT 810 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || ||||| | ||| || |||||| | || | ||| ||||| || ||| Sbjct 809 GAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 750 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||| || ||||| | ||||| ||||||| | ||| Sbjct 749 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 690 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | ||||| || || || ||||| || ||||||||||| Sbjct 689 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640 >seq153336 Length=250 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || || | ||| | ||| ||||| || | |||||||| || || ||||| || || Sbjct 3 ATTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCC 62 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || || || |||||| ||||| || || ||| | || | | |||||||| ||| Sbjct 63 GACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGA 122 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| ||||||| || | | ||| | || || | | ||| Sbjct 123 GGAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCC 182 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | || | ||||| || || || |||||||||||||| ||||| Sbjct 183 ACTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 >seq131538 Length=717 Score = 96.9 bits (106), Expect = 3e-15 Identities = 107/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 ||| ||| || | ||||| | ||| | || | ||||||||||| ||||| ||||||| Sbjct 162 AAACACCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAAT 103 Query 114211 C-GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCC 114269 | | | || || || |||||||||||| ||||| || | || | | ||||||||| Sbjct 102 CAGATAAT-GTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCT 44 Query 114270 GGAGGAATGCCTTCTTTGTC 114289 |||||||||||||||||||| Sbjct 43 GGAGGAATGCCTTCTTTGTC 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418481671883688