Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq176 152 4e-32
seq66322 96.9 3e-15
seq117972 87.8 1e-12
>seq176
Length=9840
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6155 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 6214
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
|||||||||||||||||||||||| ||||||| |||||
Sbjct 6215 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 6252
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 6155 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 6214
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
|||||||||||||||||||||||| ||||||| |||||
Sbjct 6215 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 6252
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 6093 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 6144
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Plus
Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 6093 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 6144
>seq66322
Length=2150
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 37827 ACGCACGATCTCTTGTGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCAT 37886
|| ||||| ||| |||||| | |||||||| ||||| ||| ||||| |||||||||
Sbjct 1880 ACACACGACGACTTATGGAACTCAGCTCAAATACAGCTGGTGAAAGAGGGCAAGATGCAT 1939
Query 37887 CAGTATATGCGCATGTATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGAC- 37945
| | |||||||| ||||||||||| |||||||||||| | | | || | ||
Sbjct 1940 GGTTTCCTACGCATGTACTGGTGCAAGAAGATTTTGGAATGGACCCA-GTCGCCCGAACA 1998
Query 37946 CGCGCTCAACTACGCCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAA 38005
|| | || || || ||||| | |||||| | ||||| | ||||| | ||||| ||
Sbjct 1999 GGCTTTGAAGTATGCTATTTACTTGAATGATCATTACAGTGTTGACGGCAGAGATCCAAA 2058
Query 38006 CGGTTACGTCGG 38017
||||| || ||
Sbjct 2059 TGGTTATGTTGG 2070
>seq117972
Length=685
Score = 87.8 bits (96), Expect = 1e-12
Identities = 155/221 (70%), Gaps = 4/221 (2%)
Strand=Plus/Plus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCA-ATTGTCG 33968
|| |||| |||| |||||| || || || |||||||||||||| | | | || ||
Sbjct 55 AGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTG-CG 113
Query 33969 CTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTC 34028
| || ||||||||||| || ||||| || |||||||||||||| || | || |||
Sbjct 114 ACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTC 173
Query 34029 TTTGTCCATAATTTTTTGCTTAATGGAACTC-ACACTATCAGTAGATTCGCATTCGACCG 34087
||||| | | |||| |||| || | | |||||| | ||| ||| | |
Sbjct 174 TTTGT-CTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAG 232
Query 34088 TTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATT 34128
| || || ||||| ||||| ||||| ||||| || ||||||
Sbjct 233 TAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395500432704748
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |