Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq218964 140 8e-28 seq117972 102 2e-16 seq306502 84.2 5e-11 >seq218964 Length=932 Score = 140 bits (154), Expect = 8e-28 Identities = 175/239 (73%), Gaps = 6/239 (3%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | | ||| || |||| || ||||||||| || || ||||| | Sbjct 867 TCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGA 808 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| |||||||| ||||| ||||| ||||| |||| ||| |||||| ||||| Sbjct 807 AAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGA---TCTGG 751 Query 288366 G---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 || ||||| || || || ||||||||||| || ||||| |||| ||| | ||| Sbjct 750 AGGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTC 691 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTTAT 288481 ||||| | || || || || || || || || || ||||| ||||||||| || ||| Sbjct 690 AACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTTGATAT 632 >seq117972 Length=685 Score = 102 bits (112), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| | ||| | || |||||||||||| || ||||| | || || || || || Sbjct 288 AAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATC 347 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT---GGGATTCCTTCTTT 288377 ||| ||||| || || ||||| || ||||| ||||| |||| || || |||||||| Sbjct 348 TTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTG---ATCTGGAGGAATGCCTTCTTT 404 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 || |||||||| || || || ||||| || | || | ||| ||||| | || || Sbjct 405 GTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAAT 464 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || || || || || || || || ||||| Sbjct 465 TGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 >seq306502 Length=413 Score = 84.2 bits (92), Expect = 5e-11 Identities = 109/145 (75%), Gaps = 8/145 (6%) Strand=Plus/Minus Query 207835 TTAGGAGCTTGGCTGCGGATCGCCCAT---ATATCTCTGTGAATTTTTACCGTACACGAG 207891 |||||| ||||||||||||| | |||| | |||| | || | ||||| ||| |||| Sbjct 327 TTAGGA-CTTGGCTGCGGATTGGCCATTGTACATCT-TCTGCGCTGTTACCTTACCCGAG 270 Query 207892 TTC--TGCTCTCGTCCATCATAATGTTTCCACGATGATTTGGTATCACAAGCTTTAGGGG 207949 || | | || | ||| | ||||||||| | ||||| ||| |||||||||| Sbjct 269 GTCATTACCCTGG-CCACCGCCATGTTTCCATAGCGGCTTGGTGTCAGAAGCTTTAGGCT 211 Query 207950 GTTCCCGCAATTTGACAGTGTCGCA 207974 ||||||||||||||||||||||||| Sbjct 210 GTTCCCGCAATTTGACAGTGTCGCA 186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174775889830772