Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq21365 237 2e-57 seq33957 100 3e-16 seq313031 98.7 1e-15 seq149208 98.7 1e-15 seq143699 96.9 4e-15 seq117972 95.1 1e-14 seq86066 87.8 2e-12 seq93196 86.0 7e-12 seq38429 84.2 2e-11 >seq21365 Length=2821 Score = 237 bits (262), Expect = 2e-57 Identities = 800/1232 (65%), Gaps = 33/1232 (3%) Strand=Plus/Minus Query 94966 AAAGTGACGGGGGCTTATTTTGTAGAATGGGGCGTGTACGATCGTAAGTTTCCCGCGGAC 95025 ||||| ||| || || || ||||||||||| || ||| | | || || |||| ||| Sbjct 1330 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGAT 1271 Query 95026 AAGGTGCCCATTCCCAATCTGACGCATCTATTGTACGGTTTCATACCCATTTGCGGAGGC 95085 | || || || ||||| || ||| | | || || || || ||||||||||| || Sbjct 1270 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1211 Query 95086 GACGGTATCAACGACAGTCTAAAACAGGTACCCGGCTCTTTTGAGGCTTTACAAAAATCA 95145 ||||| || || || || ||||| || | ||| ||| | || | ||| || Sbjct 1210 GACGGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1151 Query 95146 TGTGCCGGCAGAGACGATTTCAAGGTTAGCATCCACGACATTTACGGTGCTCTACAAAAA 95205 ||| |||| | || || ||||| || |||||||| | | || |||||||| Sbjct 1150 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1091 Query 95206 CCGCAAAAAGGTGTTTCCGAATACAATGAACCTTACCGTGGCAATTTTGGCCAGCTCATG 95265 || |||||||| | || || || || || ||| ||||| |||||||| | ||| Sbjct 1090 CCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATG 1031 Query 95266 GCTATTCGCAAACATAATCC-----TCATTTGAAAATT-TTGCCTAGCATCGGTGGTTGG 95319 || | || | || || | | ||||| ||| || ||| | || ||||| ||| Sbjct 1030 -----TCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCG-ATTGGTGGGTGG 977 Query 95320 ACACTGAGCGACCCTTTCTATTTTTTCGCCGACGACTATAAACGAAAAGTATTTGTGGAC 95379 || || ||| ||||||| ||||| | ||| | | |||| ||| | ||||||| | Sbjct 976 ACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGATTTGTGCAG 917 Query 95380 TCTGTTCGTGAATTCTTGCAAGTGTGGAAGTTTTTCGATGGAGTAGACATCGACTGGGAG 95439 || || || || | | | ||||| || |||||||| ||||| ||||| |||||| Sbjct 916 TCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAG 857 Query 95440 TTTCCCGGCGGAAAGGGTGCCAACCCCGACGTAGGCGATCCTAGCGTGGATGGAAACACA 95499 ||||| || || || ||||| ||||| ||| | || | || | | ||||| | Sbjct 856 TTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGG-TAGCCCA--GAAGATGGTGATTGT 800 Query 95500 TATGTAACTCTATTGAAAGAACTACGCCTAATGCTAGACGAACTGGGTGTGGTGAACAAA 95559 ||||||| | | |||||||| |||| ||||| || || || | | | || || Sbjct 799 TATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCT--CTCAGCT-AAGAAT 743 Query 95560 CGCGTG---TACGAGTTGACCAGCGCCGTGGGAGCGGGCTACGATAAAATAGACGTGATA 95616 || | ||||| ||||| || | | | || | |||||||| | || | Sbjct 742 GGCAAGAAATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTT 683 Query 95617 GATTACTCTTCGGCTAGTCAATATTTGGATCATGTGTTTTTAATGAGTTACGACTTTAAA 95676 || ||| |||| | ||| |||||||| | || || |||||||| ||||| || Sbjct 682 GACTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAG 623 Query 95677 GGCGCATGGTCCAACACGGATTTGGGTCATCAAACACCATTGTACGCACCTTCGTGGAAC 95736 || || ||||| || | | || |||||||||||||||||||| ||| | ||||| Sbjct 622 GGAGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAAT 563 Query 95737 CCTGACGACAAGTACACAACTGACTATGCCGTAAAAGAACTGCTTAAGCAAAAAGTACCT 95796 || | || | |||||| |||||| | |||||| | || | || ||| | Sbjct 562 CCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAAT 503 Query 95797 TCCAACAAAATTGTTGTGGGAGTCGCCATGTACGGCAGAGGGTGGAGTGGTGTGCACGAT 95856 | || || ||||| | || || |||||||| || | || |||| ||| || || ||| Sbjct 502 CCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGAT 443 Query 95857 TACAAAAACAATAACGTATTTACGGGCGTCGCCACAGGTCCGGTAAAAGGCACATGGGAA 95916 ||| || |||| | || || ||| ||| || || || || ||||| || ||| || Sbjct 442 TACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAA 383 Query 95917 AACGGTGTCGTCGATTATAGGCAAGTT---AACGATTTTAAAAACAGTCCAGCTTACACT 95973 |||| || || ||||| || | || || || || | || | || | | | Sbjct 382 GACGGAGTGGTTGATTACAGAGAGATTGCGAATGAAATTGCTCA-AGGCAAG-TGGGAAT 325 Query 95974 TACGCTTACGACAAAGTGGCCGAGGCGCCGTACGTTTACGGCGGATCCGACCAGGCGTTG 96033 | | ||||||||| || ||| | || || || || | | | ||| | | || Sbjct 324 TTC-ATTACGACAATGTCGCCCAAGCTCCTTATGTCTTCAGACCATC--AACTGG----A 272 Query 96034 GATCTGATTTCTTACGACGACACGTCGTCGGTATTAGCCAAAGGCGATTACGTGTTACAG 96093 || || | | || ||| | | || || | | || || | || ||| | | Sbjct 271 GACCTTGTAACCTATGACAATGCTAGATCAGTTATTGAAAAGGGTAAATATGTGAGAAAT 212 Query 96094 AATAATTTAGGTGGTTTGTTTGCATGGGAAATAGATGCCGATAATGGTGATTTGTTAAAC 96153 || || |||||||| | ||||| |||||||| || ||||| || |||||| | | || Sbjct 211 AACAAACTAGGTGGTCTCTTTGCTTGGGAAATCGACGCCGACAACGGTGATCTACTGAAT 152 Query 96154 GCCATGAACACAGGTCTGGGCAACAGCCCTGC 96185 |||||||||| ||||| || ||||| || || Sbjct 151 GCCATGAACATGGGTCTCGGTAACAGTCCGGC 120 >seq33957 Length=3082 Score = 100 bits (110), Expect = 3e-16 Identities = 67/75 (89%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 3082 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3023 Query 57067 TACTACCGAGGATTG 57081 ||||||||||||||| Sbjct 3022 TACTACCGAGGATTG 3008 >seq313031 Length=621 Score = 98.7 bits (108), Expect = 1e-15 Identities = 77/91 (85%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 15 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 74 Query 57067 TACTACCGAGGATTGAATATATAAC-TTGAA 57096 ||||||||||||| | | || ||| ||||| Sbjct 75 TACTACCGAGGATGGTGTTTACAACGTTGAA 105 >seq149208 Length=369 Score = 98.7 bits (108), Expect = 1e-15 Identities = 90/114 (79%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 41981 ACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 42040 ||||||||||| ||| || ||||| ||||| ||| ||| || ||||||||||| |||| Sbjct 122 ACCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGA 63 Query 42041 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTC 42094 ||||| || | || || ||||||||||||||||| || || || || || || Sbjct 62 GAGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATC 9 >seq143699 Length=2008 Score = 96.9 bits (106), Expect = 4e-15 Identities = 174/247 (70%), Gaps = 8/247 (3%) Strand=Plus/Minus Query 14751 TACAACATTGGTTTATTTTACTATGTACTGTGGAGTATATGCAGTGGCAAGGAGTGGATG 14810 ||||| | ||||| ||||| ||||||||||||| ||||| ||| || | |||||| Sbjct 1657 TACAATAAGGGTTTGTTTTATTATGTACTGTGGAAGATATGTGATGGTAAAAAATGGATG 1598 Query 14811 GATAAAAATGTGGCTGCCCAATTCCT-GAA-ATACGTCAAA-CGTCGCATCGAAACCACA 14867 || |||||| | | ||||| ||| ||| || || ||| | |||||| | Sbjct 1597 GACCGAAATGTTGTAGAAAAATTCAAAGAATATATGTTAAGGCGTGTTACCGAAAC---A 1541 Query 14868 ACATGCAAGCTTGGACTCTCGTCTCTTCCCTTGGACCCACAAATGAATACGTCACT-CCT 14926 | |||| | |||| || | |||||||| |||||||| ||| | |||||||| ||| Sbjct 1540 AAATGCTATATTGGTCTGACCTCTCTTCCTTTGGACCCCTTAATACAAACGTCACTGCCT 1481 Query 14927 GACCGCATTATGGTATTGTGTCGACCTCTCATCCGACATATTTAAAAATGACAAAGTTAA 14986 | | || | ||||||||||| || | ||||| ||||||||||| | || | || | Sbjct 1480 G-CAGCGCTCTGGTATTGTGTAGAAATTTCATCATACATATTTAAAGACGATGACGTGTA 1422 Query 14987 TTACGCC 14993 |||| || Sbjct 1421 TTACTCC 1415 >seq117972 Length=685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052 |||||| |||||||| | || || |||||||| |||||||| | ||||| || | Sbjct 57 ACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACC 116 Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112 || || | ||||||||||| || || || |||||||| || | ||| | || ||| || Sbjct 117 ATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTT 176 Query 42113 GTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172 ||| |||||| ||| | | | | || || | |||||| || | || || Sbjct 177 GTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAAT 236 Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 42209 ||| || || ||||| || || ||||| || |||||| Sbjct 237 GGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 >seq86066 Length=952 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 57012 CGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTA 57071 |||| | |||||||||| ||||||||||||||||||||| ||||| |||||||||||| Sbjct 947 CGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTATACTA 888 Query 57072 CCGAGGATTGA 57082 |||| || ||| Sbjct 887 CCGAAGACTGA 877 >seq93196 Length=385 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | ||||| |||| ||||||||||||||||||||| ||||| | ||||| Sbjct 360 CTCCCCGGCGGGGAATCGGACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTATCACTA 301 Query 57067 TACTACCGAGGA 57078 |||||||||||| Sbjct 300 TACTACCGAGGA 289 >seq38429 Length=2819 Score = 84.2 bits (92), Expect = 2e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 57005 TTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 57064 ||||| |||| | || ||||||| ||||||||||||||||||||| ||||| ||||| Sbjct 1709 TTCTCTCCGGCGGGGAACCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTGACCAC 1768 Query 57065 TATACTACCGA 57075 ||||||||||| Sbjct 1769 TATACTACCGA 1779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541021112896160