Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq21365 277 2e-69 seq117972 132 5e-26 seq153336 120 3e-22 seq218964 114 1e-20 seq5177 89.7 5e-13 >seq21365 Length=2821 Score = 277 bits (306), Expect = 2e-69 Identities = 647/970 (67%), Gaps = 11/970 (1%) Strand=Plus/Minus Query 27464 GTCGTCGCCGCGTACTTTGTCGAATGGGGTGTGTACGGCCGTAATTTTGCCGCGGACCGC 27523 || || | ||| ||||| || ||||||||||| ||| | || || ||| ||| || Sbjct 1327 GTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGT 1268 Query 27524 GTACCGGCGCCCAACCTGTCACATTTACTATACGGGTTCGTGCCGATATGCGGCGGCGAC 27583 |||| || || || | ||||| || || || || | || || |||||||| ||| Sbjct 1267 ATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGAC 1208 Query 27584 GGCATCAACGACAGCCTTAAAACTATTCCGGGTAGTTTCGAAGCGTTGCAAAAGTCGTGC 27643 ||||| || || ||| | ||| || || |||||| |||| ||||| ||| || Sbjct 1207 GGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGT 1148 Query 27644 GCGGGTCGTGAAAACTTTAAAGTGGCCATTCACGATCCGTGGGCTGCATTGCAAAAACCA 27703 || ||||| |||| ||||| | || |||||||| ||||| ||||| ||||||||| Sbjct 1147 AGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCA 1088 Query 27704 CAAAAAGGCGTTTCGGCTTGGACGGAACAATACAAAGGTAATTTTGGACAGTTAATGGCG 27763 |||||||| | || | |||| || | |||||||| || ||||| || |||||| | Sbjct 1087 CAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCA 1028 Query 27764 ATAAAGCGTGCAAACCCGCATTTAAAAATTCTACCGTCCATAGGAGGGTGGACGCTGTCG 27823 |||| | || ||| | || || ||||| || || || || ||||||||||| | Sbjct 1027 CTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCC 968 Query 27824 GATCCATTTTACTTTT---TTCACGACGCTGGCAAACGCGCCACATTCGTCGAATCGGTT 27880 ||||| || | ||||| || || | || ||| | | ||| || | || || Sbjct 967 GATCCTTTCTTCTTTTTAGTTGACAAATCT---AAAAGAACACGATTTGTGCAGTCAGTA 911 Query 27881 CGCGAATTTCTGCAAACTTGGAAATTTTTCGACGGCGTGGACATCGATTGGGAATTTCCT 27940 || ||||| | ||| |||||||| ||||| || || || ||||||||||| |||||| Sbjct 910 AAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCT 851 Query 27941 GGCGGTAACGGCGCAAACCCACTGTTAGGCGATCCCCAACGAGACGGT-TTAGTGTATGT 27999 || ||||| || || |||| ||| || | || | ||| ||| | || ||||| Sbjct 850 GGTGGTAAAGGTGCTAACC--CTG-ACCTCGGTAGCCCAGAAGATGGTGATTGT-TATGT 795 Query 28000 GGTGTTGTTGCGCGAACTTCGCGATATGCTCGATCAACTCGAACACCACACGGGCCGGCA 28059 ||| || ||| | || || ||||||||| | ||| | | | ||| | | Sbjct 794 AAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGCAAGAA 735 Query 28060 ATACGAACTGACAAGTGCAATCGGCGCTGGCTACGACAAAATTGAGGTAGTTGATTACAA 28119 ||||||| |||| ||| || || |||| | || ||||| | || ||||| ||| Sbjct 734 ATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGG 675 Query 28120 CGAAGCGCAATCGTATTTGGACAAAATCTTTTTAATGAGTTATGATTTTAAAGGCGCTTG 28179 | | || ||| ||| |||| | || || || ||||||||||| || || || || || Sbjct 674 CAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTG 615 Query 28180 GTCCAACTCGGATTTGGGCCATCAAACCGCTTTGTATGCGCCCGATTGGAAACCCGACGA 28239 ||| || | | || |||||||| | ||||| ||||| | ||||| ||| | || Sbjct 614 GTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGA 555 Query 28240 GCGGTATACGACCGATTTTGCGGTGCGCTCGTTGCTTCTTCAAAAAGTACGTTCCGAAAA 28299 || || | || || | || | ||| | || ||| | | | || Sbjct 554 AACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGAA 495 Query 28300 AATCGTGATCGGTGTGGCAATGTACGGTCGCGGTTGGAGTGGCGTATCGGAATATTTAAA 28359 || || | ||||| || ||||| ||||| ||||||| |||||| || || | | Sbjct 494 GATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGATTACGAAGA 435 Query 28360 CGATAATCCCTTTACCGGCATCGCCACAGGCCCGGTGCCCGGCACTTGGGAAGACGGCGT 28419 | | | |||||| || |||| ||| || || || || || |||||| ||||||| || Sbjct 434 CAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGT 375 Query 28420 CGTAGATTAC 28429 || |||||| Sbjct 374 GGTTGATTAC 365 >seq117972 Length=685 Score = 132 bits (146), Expect = 5e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| |||| ||| | || ||||||||||| |||||||| || | | || || | || Sbjct 288 AAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATC 347 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| | |||||||| || |||| || || || || || |||||||| |||||||| || Sbjct 348 TTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTC 407 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 ||| ||||| ||||||| || | ||| ||| ||| || ||||||| ||| | || Sbjct 408 TTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGT 467 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | ||||| || ||||||||||| Sbjct 468 TTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 64240 ATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTG 64299 ||||| || ||||||||||||||||||||||| | | ||||| | ||||| | || Sbjct 69 ATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCTTCCAATTG 128 Query 64300 CTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTT 64359 ||| || ||| | || || |||||||| || || || || || ||||| ||||| ||||| Sbjct 129 CTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCTTGGATTTT 188 Query 64360 TTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 |||||| || | |||||| || |||||||| | ||| | |||||| || || Sbjct 189 AGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTCTTTCCAGT 248 Query 64420 CAAAGTTTTTACGAAAATTTGCATT 64444 | ||||| || ||||| |||||| Sbjct 249 TAGGGTTTTAACAAAAATCTGCATT 273 >seq153336 Length=250 Score = 120 bits (132), Expect = 3e-22 Identities = 153/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 64234 CACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTC 64293 ||||| || | || ||||| || || ||||| || || | | |||||| | ||||| Sbjct 23 CACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCTTC 82 Query 64294 AAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTG 64353 || ||||| ||||| |||| | | || ||||| |||||||| ||||| || ||||| Sbjct 83 CAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTG 142 Query 64354 TATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTT 64413 || ||| ||| ||| || | ||||||| || |||||||||| ||| | || || Sbjct 143 AATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGTTTT 202 Query 64414 GCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || | |||||||| |||||||||||| Sbjct 203 TCCAGTTAGTGTTTTTACAAAAATTTGCATT 233 >seq218964 Length=932 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 64235 ACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCA 64294 || || |||| || |||||||||||||||||||| |||| | ||||| ||||||| Sbjct 848 ACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCC 789 Query 64295 AGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGT 64354 | ||||| || || |||| | || || || || |||||||| ||||| || ||||| Sbjct 788 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 729 Query 64355 ATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTG 64414 ||||| |||||| || | || || | || ||||| | ||| | ||| || Sbjct 728 ATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTA 669 Query 64415 CCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATA 64450 || || | ||||| |||||||| |||||||| ||| Sbjct 668 CCCGTGAGTGTTTTCACGAAAATCTGCATTTTGATA 633 >seq5177 Length=4331 Score = 89.7 bits (98), Expect = 5e-13 Identities = 650/1048 (62%), Gaps = 19/1048 (2%) Strand=Plus/Minus Query 154071 GTGAACGGCTCGAACGATTCGTTGTTGCCTAATATTTGAGCTGTAGTTGCTGTGGGCATA 154130 || || || || || ||||| ||||||| | ||||| || |||| || || |||||| Sbjct 3367 GTAAATGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATA 3308 Query 154131 TACGCCACCAACAAAGAGTTTCGCAAACCGTGTTTTGCAATGCGCAATTTTAAATCTGCC 154190 || | ||| | ||| || |||||||| |||||||| || ||| | | ||| Sbjct 3307 GGTGCTATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTTGAGGACAGCC 3248 Query 154191 CAATTCCACAAGTTGGTAGGTTGCACGTTCCACATGTCGTATTGCAAAACACCCAAACTC 154250 || | ||| | || ||||| ||||||||| || || || | | ||| || Sbjct 3247 CAGTCCCAAAGGTCTGTAGGAGTTTTGTTCCACATATCATACTGGAGGATACCTTGGCTA 3188 Query 154251 GCCGGACTGTCACTATAACTAGAGTACGGCCCGTTCAGTTT-TGCCAAGTCGCAACTGGC 154309 || ||||| | ||| | ||| | || ||| ||| ||| || || ||||| || Sbjct 3187 GCTGGACTTCCTTGATATGTGCTGTATGCACC-TTCTTTTTCTGCTAATTCACAACTAGC 3129 Query 154310 TTCTAACGCCGCATAGTATACGGTTTCGGCAATTTGTTTGTTTAACATTTTGGCTTTGTC 154369 |||||| || |||| || | ||||| ||||||| || | | | | ||||| || Sbjct 3128 TTCTAATGCACCATAATAAATTGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTC 3069 Query 154370 ACTTTCGTACGGCAATCCCAATATACA-AAAAGCATCGGCGAGCCCTTGAATGCCCACTC 154428 ||||||||| || | || | || ||| ||| | ||| || | || |||| || | | Sbjct 3068 ACTTTCGTAAGGTATTCTC-ATCAACACAAATGTATCTGCCATACCCTGAACACCAATAC 3010 Query 154429 CAACGGGTCTGTGTTTTAAATTCGATTCTTTGGCAGCCTCCAGAGGATAATAATTGATAT 154488 | | || | ||| | | ||| || ||| || | | ||||||| | || | || Sbjct 3009 CGATAGGACGGTGCCTCATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACAT 2950 Query 154489 CGATAATTTTATTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGCGACAAAAT 154548 | || | ||| |||| || |||| Sbjct 2949 CAATGACTTTGTTTAAATTTTGAGTCACAATCTTAGTGATTTCTTTTAATTTTTTAAAA- 2891 Query 154549 CAAACACTCCGCTTTTAATAAAACGATTTACACAC-ACAGACGCCAAGTTGCAAACGGCA 154607 | || | |||| | |||| ||| | | || || | |||||| || || Sbjct 2890 CTAAATCGATTATTTTCAACAAACATGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCC 2831 Query 154608 ATT---TCTTCAGAACTACTGTATTGCACAATTTCTGCGCACAAATTACTGCATCGAATG 154664 | | ||||| || | |||||||||||| || | ||| | ||| || ||| ||| Sbjct 2830 ACTTCATCTTCTGA---AGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATA 2774 Query 154665 GTGCCCAGGTTTTTCTGATTCGATTTGATGTTGCATGCGTCTTTGTACAAAATGTACGGG 154724 ||||| || ||||| ||||| || ||||||| || || || ||||| || || || Sbjct 2773 GTGCCAAGATTTTTTTGATTACTCTTTCTGTTGCAAGCATCCTTATACAACATATATGGT 2714 Query 154725 GTGCCCGTTTCCACTTGGGTTTCAATAATTG--TGCGAAACAGACTTCGCGCCTCAACTT 154782 || || || |||||||| | ||| ||||| | | | | | | ||| | || ||| Sbjct 2713 GTACCAGTCTCCACTTGAGCTTCTATAATAGACTTCCATA-ACTCTT-GAGCTCTGACTC 2656 Query 154783 GACAAGTAAATCGATTTTCGCTCTCATATTGTTCGTACAGTTTTTCAAACTCTAAACTGT 154842 | |||| || ||||| ||||||| | || || ||| || || | || Sbjct 2655 GTTTTATAAACCGTTTTTCTTCTTCATATTTGGCATATAGGGCTTCGAATTCCTCTCCGT 2596 Query 154843 ACACGTCCGACAAACCGGGACAGCGGTCGGGACACATCAATGACCACATTTCGTTTTGTT 154902 | ||| | | || ||||| | |||||||| | ||| ||| | | || Sbjct 2595 AACAGTCAGCGAGGCCAGGACAATCATGAGGACACATGAGACTCCAATCTTCATCCTTTT 2536 Query 154903 GTACGCGTTTCATAAACAAATCCGGCACCCACAAAGCGTACAACAAATCACGCGCCTTTT 154962 ||| | ||||||||||| ||| || | ||| ||||| || |||| || | || | Sbjct 2535 CTACCCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCA 2476 Query 154963 TGTCTTCAGCGCCCATGTTTCGCTTTAAATTCAAAAAATCATATATGTCGGCGTGCCACG 155022 | ||||| || |||| ||||||| || || ||| ||||||| || ||||| | Sbjct 2475 TTTCTTCCTTACCTGTGTTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAG 2416 Query 155023 GCTCTAAATATACGGCCATCGCGCCTTTGCGT---TTTCCTCCTTGATCCACGTGACGCA 155079 ||||||| || | || | || || ||| ||||| |||||||| || | | Sbjct 2415 GCTCTAAGTAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGG 2356 Query 155080 CACAATTATTGTACACGCGCAACAATGG 155107 || ||| |||||||| | ||||| ||| Sbjct 2355 CAGTATTGTTGTACACTCTCAACATTGG 2328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 497628895616560