Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq21365 183 3e-41 seq2512 104 2e-17 seq117972 98.7 1e-15 seq218964 89.7 5e-13 seq153336 87.8 2e-12 seq214307 86.0 6e-12 >seq21365 Length=2821 Score = 183 bits (202), Expect = 3e-41 Identities = 361/527 (69%), Gaps = 13/527 (2%) Strand=Plus/Minus Query 27983 AAACATCCCGAGAAAATTGTGGCCGCCTATTTCGTCGAGTGGGGCGTGTATCTGCGGCAG 28042 ||||||| || ||| |||||| |||||| ||||| || ||||| || || | || | Sbjct 1341 AAACATCTGGA-AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAA 1283 Query 28043 TTTCCCGTCGACAAAGTGCCCGCGCCCAACCTGTCGCACTTGCTGTACGGTTTCGTGCCG 28102 || ||||| || | || || || || | || ||||| || || || | || Sbjct 1282 TTCCCCGTGGATCGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCC 1223 Query 28103 ATATGCGGCGGCGACGGCATAAACGACGCCCTCAAGACCGTTCCC-GGCAGTTTCGAGGC 28161 || |||||||| ||||||||||| || | | || | | || ||||||||| | || Sbjct 1222 ATTTGCGGCGGTGACGGCATAAATGATAGCTTAAA-AGAGATCGAAGGCAGTTTCCAAGC 1164 Query 28162 GCTGCAGCGCTCGTGCGCCGGGCGCGCCGACTTCAAGGTGACGATCCACGATCCCTGGGC 28221 ||||| || || || ||| || | |||||||| || | ||||||||||| ||||| Sbjct 1163 ACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGC 1104 Query 28222 CGCCATTCAGAAGCCGCAAAAGGGCGTCTCTACGTGGAACGAGCCGTACAAAGGCAACTT 28281 || | || || || ||||| || | ||| | ||||||||||| |||||||||||||| Sbjct 1103 AGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTT 1044 Query 28282 TGGGCAATTGATGAGCGTCAAATTAGCCAATCCGCACTTGAAGGTGCTGGCGTCGATCGG 28341 ||| ||||| ||| | ||| |||| || | |||||| | || | ||||| || Sbjct 1043 TGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGG 984 Query 28342 CGGCTGGACGCTGTCGGACCCATTC----TTTCACATGCACGACGC-GACCGTGCGCCAA 28396 || |||||||| | || || ||| ||| | || || | | | | | | | Sbjct 983 TGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTTG-ACAAATCTAAAAGAACACGA- 926 Query 28397 ACGTTCATCGATTCCGTCGTGGACTTTCTGCTGACCTGGAAGTTCTTCGACGGCGTCGAC 28456 || | | || || ||| ||||| || || ||||| |||||||| || || || Sbjct 925 ---TTTGTGCAGTCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGAT 869 Query 28457 ATCGATTGGGAGTTTCCGGGCGGCAAAGGAGCCAATCCCGATGTCGG 28503 ||||||||||||||||| || || ||||| || || || || |||| Sbjct 868 ATCGATTGGGAGTTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGG 822 >seq2512 Length=3386 Score = 104 bits (114), Expect = 2e-17 Identities = 97/121 (80%), Gaps = 2/121 (2%) Strand=Plus/Minus Query 124740 CGGCTTCTACTACATGGGCGTCGGCGACGAAGTGCGTTGCGCTTTCTGCAAAGTCGAAAT 124799 ||||||||| ||| ||||| ||| || ||||| || ||||| || || ||||| ||||| Sbjct 1497 CGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAAT 1438 Query 124800 TATGCGATGGCAGCCCGGCGACGAT-CCGCTAACGGACCACAAACGATGGGCGCCTCAGT 124858 |||| |||| | ||||||||| ||||||| ||||||| |||| |||||||| |||| Sbjct 1437 TATGAAATGGGTCGCGGGCGACGATCCCGCTAA-GGACCACCAACGGTGGGCGCCCCAGT 1379 Query 124859 G 124859 | Sbjct 1378 G 1378 >seq117972 Length=685 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || ||||| | | || || |||||||||||||| ||| Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || | ||| ||||| | | |||| || ||||| || || || || Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || |||||||| |||||| ||||| | ||| | || || | | ||||| Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 225 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || ||||| |||||||||||||| Sbjct 226 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| ||||| | |||||||| | | || || ||||| ||||||||||| Sbjct 274 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 333 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || | ||| || || | | || ||||| ||||| || ||||| Sbjct 334 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 393 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || ||||||||||| |||||| |||| | ||| | ||||| | | || || Sbjct 394 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 453 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | ||||| ||||| || ||||| |||||||| ||||| Sbjct 454 TCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 >seq218964 Length=932 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | |||||| || | || | | || || ||||||||||||||||| Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||| || | ||| || || | | || | ||| ||||| || ||||| Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| ||| |||| | ||||| | ||| | ||||||| | || || Sbjct 746 ATGCCTTCCTTGTCT-TGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAAC 688 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | |||||||| || || ||||| || ||||||||||| Sbjct 687 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640 >seq153336 Length=250 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458 |||||| ||||| || | | || ||||| || ||||| ||||| || || ||| Sbjct 17 ACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCC 76 Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518 || || ||||| || |||| | || | | |||||||| ||||| || ||||| || Sbjct 77 ATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTT 136 Query 138519 GTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577 ||| ||| | |||| |||| | ||| | || || | | ||||| || | || | Sbjct 137 GTCT-TGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAA 195 Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||||| ||||| || |||||||||||||| ||||| Sbjct 196 TAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 >seq214307 Length=222 Score = 86.0 bits (94), Expect = 6e-12 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671 |||| ||||| || |||||| ||||||| || || | ||||||||| || ||||| | Sbjct 55 AGGATGCGGTAGCCATCGAACAGGAGTTCTTAACAGACGCGCTGCCAGTACGCCTGCTAG 114 Query 52672 GCATGAAC-GCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTG 52724 |||||||| ||| || |||| | | ||||| ||||||||||| ||||| ||| Sbjct 115 GCATGAACTGCGACCTC-ATGTCCAATTACATAGAGTTTGTGGCTGATCGCCTG 167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494260142501280