Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 183 3e-41
seq2512 104 2e-17
seq117972 98.7 1e-15
seq218964 89.7 5e-13
seq153336 87.8 2e-12
seq214307 86.0 6e-12
>seq21365
Length=2821
Score = 183 bits (202), Expect = 3e-41
Identities = 361/527 (69%), Gaps = 13/527 (2%)
Strand=Plus/Minus
Query 27983 AAACATCCCGAGAAAATTGTGGCCGCCTATTTCGTCGAGTGGGGCGTGTATCTGCGGCAG 28042
||||||| || ||| |||||| |||||| ||||| || ||||| || || | || |
Sbjct 1341 AAACATCTGGA-AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAA 1283
Query 28043 TTTCCCGTCGACAAAGTGCCCGCGCCCAACCTGTCGCACTTGCTGTACGGTTTCGTGCCG 28102
|| ||||| || | || || || || | || ||||| || || || | ||
Sbjct 1282 TTCCCCGTGGATCGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCC 1223
Query 28103 ATATGCGGCGGCGACGGCATAAACGACGCCCTCAAGACCGTTCCC-GGCAGTTTCGAGGC 28161
|| |||||||| ||||||||||| || | | || | | || ||||||||| | ||
Sbjct 1222 ATTTGCGGCGGTGACGGCATAAATGATAGCTTAAA-AGAGATCGAAGGCAGTTTCCAAGC 1164
Query 28162 GCTGCAGCGCTCGTGCGCCGGGCGCGCCGACTTCAAGGTGACGATCCACGATCCCTGGGC 28221
||||| || || || ||| || | |||||||| || | ||||||||||| |||||
Sbjct 1163 ACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGC 1104
Query 28222 CGCCATTCAGAAGCCGCAAAAGGGCGTCTCTACGTGGAACGAGCCGTACAAAGGCAACTT 28281
|| | || || || ||||| || | ||| | ||||||||||| ||||||||||||||
Sbjct 1103 AGCATTACAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTT 1044
Query 28282 TGGGCAATTGATGAGCGTCAAATTAGCCAATCCGCACTTGAAGGTGCTGGCGTCGATCGG 28341
||| ||||| ||| | ||| |||| || | |||||| | || | ||||| ||
Sbjct 1043 TGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGG 984
Query 28342 CGGCTGGACGCTGTCGGACCCATTC----TTTCACATGCACGACGC-GACCGTGCGCCAA 28396
|| |||||||| | || || ||| ||| | || || | | | | | | |
Sbjct 983 TGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTTG-ACAAATCTAAAAGAACACGA- 926
Query 28397 ACGTTCATCGATTCCGTCGTGGACTTTCTGCTGACCTGGAAGTTCTTCGACGGCGTCGAC 28456
|| | | || || ||| ||||| || || ||||| |||||||| || || ||
Sbjct 925 ---TTTGTGCAGTCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGAT 869
Query 28457 ATCGATTGGGAGTTTCCGGGCGGCAAAGGAGCCAATCCCGATGTCGG 28503
||||||||||||||||| || || ||||| || || || || ||||
Sbjct 868 ATCGATTGGGAGTTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGG 822
>seq2512
Length=3386
Score = 104 bits (114), Expect = 2e-17
Identities = 97/121 (80%), Gaps = 2/121 (2%)
Strand=Plus/Minus
Query 124740 CGGCTTCTACTACATGGGCGTCGGCGACGAAGTGCGTTGCGCTTTCTGCAAAGTCGAAAT 124799
||||||||| ||| ||||| ||| || ||||| || ||||| || || ||||| |||||
Sbjct 1497 CGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAAAT 1438
Query 124800 TATGCGATGGCAGCCCGGCGACGAT-CCGCTAACGGACCACAAACGATGGGCGCCTCAGT 124858
|||| |||| | ||||||||| ||||||| ||||||| |||| |||||||| ||||
Sbjct 1437 TATGAAATGGGTCGCGGGCGACGATCCCGCTAA-GGACCACCAACGGTGGGCGCCCCAGT 1379
Query 124859 G 124859
|
Sbjct 1378 G 1378
>seq117972
Length=685
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| || ||||| | | || || |||||||||||||| |||
Sbjct 46 CCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAA 105
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || | ||| ||||| | | |||| || ||||| || || || ||
Sbjct 106 AGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGG 165
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| || |||||||| |||||| ||||| | ||| | || || | | |||||
Sbjct 166 ATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACT 225
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || || ||||| || ||||| ||||||||||||||
Sbjct 226 TCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| ||||| | |||||||| | | || || ||||| |||||||||||
Sbjct 274 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 333
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||||| || || | ||| || || | | || ||||| ||||| || |||||
Sbjct 334 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 393
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||||||||| |||||| |||| | ||| | ||||| | | || ||
Sbjct 394 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 453
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | ||||| ||||| || ||||| |||||||| |||||
Sbjct 454 TCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500
>seq218964
Length=932
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || || | |||||| || | || | | || || |||||||||||||||||
Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || ||| || | ||| || || | | || | ||| ||||| || |||||
Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||| ||||| ||| |||| | ||||| | ||| | ||||||| | || ||
Sbjct 746 ATGCCTTCCTTGTCT-TGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAAC 688
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||| || || ||||| || |||||||||||
Sbjct 687 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq153336
Length=250
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 138399 ACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGA 138458
|||||| ||||| || | | || ||||| || ||||| ||||| || || |||
Sbjct 17 ACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCC 76
Query 138459 GTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTT 138518
|| || ||||| || |||| | || | | |||||||| ||||| || ||||| ||
Sbjct 77 ATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTT 136
Query 138519 GTCGGTGATTTTTTGTTTTAAT-TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCA 138577
||| ||| | |||| |||| | ||| | || || | | ||||| || | || |
Sbjct 137 GTCT-TGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAA 195
Query 138578 GCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| ||||| || |||||||||||||| |||||
Sbjct 196 TAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
>seq214307
Length=222
Score = 86.0 bits (94), Expect = 6e-12
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 52612 AGGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGG 52671
|||| ||||| || |||||| ||||||| || || | ||||||||| || ||||| |
Sbjct 55 AGGATGCGGTAGCCATCGAACAGGAGTTCTTAACAGACGCGCTGCCAGTACGCCTGCTAG 114
Query 52672 GCATGAAC-GCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTG 52724
|||||||| ||| || |||| | | ||||| ||||||||||| ||||| |||
Sbjct 115 GCATGAACTGCGACCTC-ATGTCCAATTACATAGAGTTTGTGGCTGATCGCCTG 167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494260142501280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |