Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq218964 154 1e-32 seq117972 116 3e-21 seq153336 111 1e-19 >seq218964 Length=932 Score = 154 bits (170), Expect = 1e-32 Identities = 162/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| ||||| |||||||| |||||||| || ||| | | ||||||| ||||| Sbjct 842 TGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCCAATTGC 783 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | |||||||| ||||| || ||||| ||||||||||| |||||| Sbjct 782 TTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGAATTTTC 723 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||||||| |||| ||||| ||| | ||| || || || |||||||||||||| || Sbjct 722 GCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTTACCCGTG 663 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTGAAAT 15185 || ||||| || ||||| ||||| ||||| || Sbjct 662 AGTGTTTTCACGAAAATCTGCAT-TTTGATAT 632 >seq117972 Length=685 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || || |||||||| ||||| |||||||| |||||||||||| ||| | | | ||| Sbjct 61 AATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACCATCT 120 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || ||||| || ||||| | || | ||||| || || ||| || || || ||||| Sbjct 121 TCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTTGTCT 180 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||||| ||||||| |||| |||||||| ||| || || | |||||||| Sbjct 181 TGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAATGGTC 240 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || || ||||| |||||||| ||||| Sbjct 241 TTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| || | | |||||||| | ||||| |||||||| |||||||| || Sbjct 274 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 333 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| ||||| ||||| ||| | || | ||| ||||| || ||| Sbjct 334 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 393 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| ||||| |||||| |||| || || || ||| || Sbjct 394 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 453 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| ||||| ||||| || || || ||||| ||||||||||||||| Sbjct 454 TCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCATA 501 >seq153336 Length=250 Score = 111 bits (122), Expect = 1e-19 Identities = 154/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || ||||| || | ||||| || || || ||||| || || || | | | | ||| Sbjct 21 AACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCT 80 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | ||| || || ||| | ||||| | |||||||| ||||| ||||||||||| Sbjct 81 TCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCT 140 Query 15085 CAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 ||| ||||| || ||| |||| || ||||| | ||| || ||||| ||||| || Sbjct 141 TGAATCTTTGC-CTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGT 199 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || || || |||||||||||||||||||| Sbjct 200 TTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355986088446590