Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 156 4e-33
seq117972 114 1e-20
seq218964 109 5e-19
seq153336 100 3e-16
>seq21365
Length=2821
Score = 156 bits (172), Expect = 4e-33
Identities = 346/515 (67%), Gaps = 22/515 (4%)
Strand=Plus/Minus
Query 22307 AAAATTGTCGCCGGCTATTTTGTCGAGTGGGGAGTGTACCTTCGCCAGTTTCCCGCCGAC 22366
||| |||| | || ||| || || || ||||| || |||| | | | || |||| ||
Sbjct 1330 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGAT 1271
Query 22367 AAGGTGCCCGTGCCGAACCTGTCGCATTTGCTCTACGGTTTCGTGCCAATATGCGGCGGA 22426
| || | || || || | ||||||||||| || || | || || ||||||||
Sbjct 1270 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1211
Query 22427 GACGGCATCAACGACGCCCTGAAAACGGTGCCGGGAAGCTTCGAGGCGTTGCAACGGTCG 22486
|||||||| || || | | ||| | | || || ||| | || ||||||||||
Sbjct 1210 GACGGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1151
Query 22487 TG---CGTCAATAGAGCCGATTTCAAGGTGACCATACACGATCCGTGGGCGGCCGTACAA 22543
|| || | | ||| || ||||| || | || |||||||| ||||| || |||||
Sbjct 1150 TGTAGCGGCCGT-GAG--GACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAA 1094
Query 22544 AAACCTCAAAAAGGCGTGTCGTCGTGGAACGAACCGTACAAAGGCAACTTTGGTCAATTG 22603
||||| |||||||| |||| || |||||||| || ||||||||||||||||| |||||
Sbjct 1093 AAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTA 1034
Query 22604 ATGGCAGTGAAAAGAGCGAATCCTCATCTCAAAGTGTTAGCATCGATCGGCGGATGGACG 22663
||| || | ||| ||| ||| | | || | | | ||||| || || ||||||
Sbjct 1033 ATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACG 974
Query 22664 TTGTCCGATCCGTT----TTATCATATG-CA---CGACAAGAACGTGAGACAAATTTTCA 22715
| ||||||| || || | | || || | | |||||| || ||
Sbjct 973 CTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGA--------TTTG 922
Query 22716 TCGATTCGGTGGAAGAGTATTTGATCACGTGGAAGTTCTTTGACGGCGTCGATATTGATT 22775
| | || || | |||| | | | || ||||| ||||| || || || ||||| ||||
Sbjct 921 TGCAGTCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATT 862
Query 22776 GGGAGTTTCCCGGCGGCAAGGGGGCGAATCCTAAC 22810
|||||||||| || || || || || || ||| ||
Sbjct 861 GGGAGTTTCCTGGTGGTAAAGGTGCTAACCCTGAC 827
>seq117972
Length=685
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | ||||| |||||||| | ||||| ||||||||||| |||||||||
Sbjct 45 TCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGA 104
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| |||||| ||| || | || || ||||| |||| | ||||||||||| || ||
Sbjct 105 AAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGG 164
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|||||||| ||||| |||||| || | | ||| | || || | || ||
Sbjct 165 GATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCAC 224
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | || || || || || ||||| ||||||||||||||
Sbjct 225 TTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
>seq218964
Length=932
Score = 109 bits (120), Expect = 5e-19
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| |||| ||||| |||| || | ||||| ||||||||||| ||||| ||
Sbjct 867 TCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGA 808
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
| ||||| || || | || ||||||||| | ||||| || || ||||| |||||
Sbjct 807 AAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGG 748
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065
||||| |||||||| |||||| || | | ||| | ||||| | | || ||
Sbjct 747 AATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAAC 688
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
||| | || | ||||| || || || ||||| || |||||||||||
Sbjct 687 TTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq153336
Length=250
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| | || |||||||| || || | ||||| || || || || || || ||
Sbjct 5 TCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGA 64
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| ||||| ||| || || || ||||| ||| | ||||||| || || || |||||
Sbjct 65 CAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGG 124
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||| |||||||| ||| | | ||| || | | ||||| || || | | || |
Sbjct 125 AATGCCTTCCTTGTCT-TGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCA 183
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| | || | ||||| || || || |||||||||||||| |||||
Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 473582308809760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |