Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq218964 114 3e-20 seq153336 111 4e-19 seq117972 100 7e-16 seq117971 96.9 8e-15 >seq218964 Length=932 Score = 114 bits (126), Expect = 3e-20 Identities = 157/216 (73%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 199421 ACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCC 199480 || ||||| ||||| || || ||||| | ||||||||| | | ||| | || |||||| Sbjct 848 ACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCCGTCTTCC 789 Query 199481 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGA 199540 | |||||||| ||||| || | ||| || || || ||| ||| ||||| || ||| Sbjct 788 AATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTTGTCTTGA 729 Query 199541 ATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTT 199599 || ||| |||| || ||| | ||||| | | ||| || ||||| || || || || Sbjct 728 AT-TTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAATGGTTTT 670 Query 199600 ACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 ||||||||| |||||||| ||||| || |||||| Sbjct 669 ACCCGTGAGTGTTTTCACGAAAATCTG---CATTTT 637 >seq153336 Length=250 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| | ||| || ||||| |||| ||| ||||| | || || | ||||||||||| || Sbjct 29 GTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGACAGTGTGCGCCCATCTTCCAGTTG 88 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 |||||||||||| || | | || ||||| ||| ||| ||||| || |||||||| Sbjct 89 CTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGAATGCCTTCCTTGTCTTGAATCTT 148 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 | ||| || ||||| || || | | ||| || || || || || || || || || Sbjct 149 TGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACTTCTAAAGTAATAGTTTTTCCAGT 208 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || ||||| ||||||||||| Sbjct 209 TAGTGTTTTTACAAAAATTTG 229 >seq117972 Length=685 Score = 100 bits (110), Expect = 7e-16 Identities = 139/195 (71%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 199432 AGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCC 199491 ||| || || ||||||| ||||||||||| | || | |||||||||| ||||| || Sbjct 303 AGTAGATTCTTTTTGGATGTTGTAGTCAGAAAGTGTACGACCATCTTCCAATTGCTTGCC 362 Query 199492 GGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTT 199551 ||||| || ||||| || || || ||| ||| |||||| || || || || ||| Sbjct 363 CGCGAAAATAAGACGTTGTTGATCTGGAGGAATGCCTTCTTTGTCTTGGATTTTAGCCTT 422 Query 199552 CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGT 199611 || ||| | ||||| | | ||| || || || || || || || || || || || Sbjct 423 TACATTTTCAATTGTGTCAGAGGCTTCAACTTCTAAAGTAATTGTTTTGCCAGTAAGTGT 482 Query 199612 TTTCACAAAAATTTG 199626 ||| ||||||||||| Sbjct 483 TTTAACAAAAATTTG 497 Score = 84.2 bits (92), Expect = 5e-11 Identities = 124/176 (70%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | || ||||| || |||||||| | || || |||| | || Sbjct 508 CGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTA 567 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||||||||| || ||||| || || ||||| | ||| ||||| || ||| ||| Sbjct 568 CGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCT 627 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATC 199584 ||| || || |||||| |||||| ||| | ||||| | || |||||| || Sbjct 628 TCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTCTACCTC 683 >seq117971 Length=252 Score = 96.9 bits (106), Expect = 8e-15 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || || || ||||||||||||| ||||||||| | ||||| | |||||| Sbjct 106 AGTACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCCGATAAAGTACGCCCATCT 47 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 |||| |||||| ||||| ||||||||||| || || || || Sbjct 46 TCCAACTGCTTGCCGGCAAAGATGAGACGTTGTTGATCTGG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1174046120355858