Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq21365 174 2e-38 seq117972 89.7 6e-13 >seq21365 Length=2821 Score = 174 bits (192), Expect = 2e-38 Identities = 791/1239 (64%), Gaps = 64/1239 (5%) Strand=Plus/Minus Query 98734 AAAGTTACGGGGGCTTATTTTGTAGAATGGGGTGTTTACGATCGCAAATTTCCAGCAGAT 98793 |||||| ||| || || || |||||||||||||| ||| | | ||||| || | ||| Sbjct 1330 AAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGAT 1271 Query 98794 AAAGTGCCTATCCCCAATTTGACACACCTTTTGTATGGTTTTATCCCCATTTGCGGAGGC 98853 | ||||| || ||| | || || | | ||||| ||||| ||||||||||| || Sbjct 1270 CGTATACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGT 1211 Query 98854 GACGGTATAAACGACAGTCTAAAACAAGTGCCGGGATCTTTTGAGACGTTACAAAAATCG 98913 ||||| ||||| || || ||||| | | || ||| | | | ||| || Sbjct 1210 GACGGCATAAATGATAGCTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCC 1151 Query 98914 TGCGATAAGAGAGATGATTTCAAGGTGAGCATCCACGATATTTACGGTGCTCTACAGAAA 98973 || | || || ||||| || ||||||||| | | || |||| ||| Sbjct 1150 TGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAA 1091 Query 98974 CCACAACAGGG--TGTCTCCGATTATAACGAGCCTTACCGTGGCAATTTCGGACAGCTTA 99031 |||||| | || ||||| | | |||||||| ||| ||||| || || || | | Sbjct 1090 CCACAAAAAGGATTGTCTTCA--TGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAA 1033 Query 99032 TGGCCATACGTAAACA---CAACCCACATCTAAAAATCCTACCCAGTATCGGTGGTTGGA 99088 || | || ||||| | ||| | | || || || ||| || ||||| |||| Sbjct 1032 TGTCACTA---AAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGA 976 Query 99089 CTCTTAGCGACCCCTTCTATTTTTTCGCCGATGATTACAAGCGCAAAGTGTTCGTAGACT 99148 | ||| ||| || |||| ||||| | || | | || | | | || || | | Sbjct 975 CGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGATTTGTGCAGT 916 Query 99149 CGGTTCGTGAATTCCTACAGGTGTGGAAATTTTTCGACGGTGTAGACATCGACTGGGAGT 99208 | || || || || | |||||||| ||||| |||||||| ||||| ||||||| Sbjct 915 CAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGT 856 Query 99209 TTCCTGGCGGAAAGGGGGCCAACCCTGAAGTAGGAAATCCTAATGAGGACGGAAACACTT 99268 ||||||| || || || || |||||||| | || | || || || || | || Sbjct 855 TTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGGTAGCCCA---GAAGATGGTGATTGTT 799 Query 99269 ATGTCACACTTCTGCAAGAGCTTCGTTTGATGCTTGACGAATTG---GGTGTG---GCCA 99322 |||| | | || |||| | ||| |||||| || || | | | | | || Sbjct 798 ATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGCA 739 Query 99323 ATAAACGTGTTTACGAACTGACAAGTGCCGTGGGCGCCGGTTACGATAAAATCGACGTGG 99382 | ||| |||||| |||| ||| | || | || | ||||||||| | || | Sbjct 738 AGAAA------TACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTG 685 Query 99383 TCGATTACTCTACAGCCAG--TCAATATT---TGGACCATGTGTTTTTAATGAGTTACGA 99437 | || |||| || || |||| ||| |||| ||| | || || |||||||| || Sbjct 684 TTGA-----CTACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGA 630 Query 99438 TTTTAAAGGCGCCTGGTCCAACACCGACT-TGGGTCATCAAACACCATTGTATGCACCAT 99496 || || || |||||||| || ||| | || ||||||||||||||||| || || Sbjct 629 CTTCAAGGGAGCCTGGTCAAATGAT-ACTCTTGGACATCAAACACCATTGTACGCGCCTG 571 Query 99497 CGTGGAACTCCGAAGAGAGATACACAACCGATTATGCGGTTAAACAGCTATTAAAGAAAA 99556 | ||||| || | || | |||||| | || | | || ||| | | || | Sbjct 570 CATGGAATCCCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGG 511 Query 99557 AAGTGCCTTCTCACAAGATTGTAGTGGGAGTCGCCATGTACGGCAGAGGATGGAGTGGAG 99616 |||| | || | ||||||||| | || || |||||||| || | || |||| ||| | Sbjct 510 GAGTGAATCCTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCG 451 Query 99617 TGCATGACTACAAAAATAATAACGTTTTTACGGGTGTGGCCACGGGACCGGTAAAAGGCA 99676 | ||||| ||| || | || | || || || || || ||||| || ||||| | Sbjct 450 TTCATGATTACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTA 391 Query 99677 CCTGGGAAAACGGTGTTGTTGATTATAGGCAGGT--CGAA-GA----GCTCAA---AAAC 99726 | ||| || |||| || |||||||| || || | |||| || |||||| || Sbjct 390 CTTGGCAAGACGGAGTGGTTGATTACAGAGAGATTGCGAATGAAATTGCTCAAGGCAAGT 331 Query 99727 AACAATTACACATACGCATACGACAAAGTGGCCGAGGCGGCATATATTTACGGTGGCGCC 99786 |||| || |||||||| || ||| | || | ||| | | | | | | Sbjct 330 GGGAATTTCA-------TTACGACAATGTCGCCCAAGCTCCTTATGTCTTCAG-ACCATC 279 Query 99787 GAC--CAGGCGTTGAATTTAATTTCTTACGACGACTCATCGTCTGTACTAGCAAAAGGTA 99844 || || | ||| ||| | || ||| | | || || | | ||| |||| Sbjct 278 AACTGGAGACCTTG----TAA---CCTATGACAATGCTAGATCAGTTATTGAAAAGGGTA 226 Query 99845 ATTACGTTTTACAAAACAATCTCGGAGGTTTATTTGCTTGGGAAATCGATGCCGACAACG 99904 | || || | | ||||| || || ||| | ||||||||||||||||| |||||||||| Sbjct 225 AATATGTGAGAAATAACAAACTAGGTGGTCTCTTTGCTTGGGAAATCGACGCCGACAACG 166 Query 99905 GTGACTTGTTAAACGCCATGAACACAGGTTTGGGTAACA 99943 |||| | | || |||||||||| ||| | ||||||| Sbjct 165 GTGATCTACTGAATGCCATGAACATGGGTCTCGGTAACA 127 >seq117972 Length=685 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || ||||||||||| | || | |||||| ||| || |||||||| |||||||| || Sbjct 274 CCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGAA 333 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || || | || || | |||||||| ||||| || | || || || || | || Sbjct 334 AGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGGA 393 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | || || ||||| ||| || ||| | | | | ||||| | ||| || Sbjct 394 ATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAACT 453 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || || |||||||| || || ||||||||||| |||||||| Sbjct 454 TCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562957846758480