Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq21365 143 3e-29 seq213871 132 5e-26 seq117972 125 7e-24 seq218964 107 2e-18 seq197295 96.9 3e-15 >seq21365 Length=2821 Score = 143 bits (158), Expect = 3e-29 Identities = 256/374 (68%), Gaps = 0/374 (0%) Strand=Plus/Plus Query 62341 AACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCAGGTGCGGGTGCGCT 62400 || ||||||| || ||||| || || || ||||| || | || | ||| | ||| Sbjct 960 AAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCT 1019 Query 62401 TTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGCTCCACGCGGTCACG 62460 | || | | ||| | ||||| |||||||| ||||| |||||| |||| | | || Sbjct 1020 TGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAAT 1079 Query 62461 CCCTTTTGCGGCTTTTGCACGGCCGCCCACGGGTCGTGCACCGCCAGTTTGAAGTCGTCG 62520 || ||||| || ||||| | || ||||| || ||||| | | | ||||||||| || Sbjct 1080 CCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCA 1139 Query 62521 CGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGGACTTGAGGCTGTCG 62580 ||||| || || || ||||| || | ||| ||||| |||| || | ||| || Sbjct 1140 CGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCA 1199 Query 62581 TTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGATGCGTGAGGTTGGGC 62640 || |||||||| |||||||| || || | ||||| || |||| ||| || || || || Sbjct 1200 TTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGT 1259 Query 62641 ACGGGCACCTTGTCGGCGGGAAACTCGCGTCCGTACACGCCCCACTCGACGAAATAGGCG 62700 | || | || |||| || | | ||| || ||||| || ||||| |||||| Sbjct 1260 ATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCG 1319 Query 62701 CCCACCACCTTGCC 62714 ||||| || || || Sbjct 1320 CCCACAACTTTTCC 1333 >seq213871 Length=423 Score = 132 bits (146), Expect = 5e-26 Identities = 144/190 (76%), Gaps = 1/190 (1%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 |||| ||||| ||||| ||||| ||||||||||| || |||||||| | ||| ||||||| Sbjct 354 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTT 295 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | | ||||||||| | || || ||||| || || || | ||||| || ||||| |||| Sbjct 294 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAG 235 Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096 | | | || || || || ||||| |||||| ||||||| | | |||||| || | Sbjct 234 CGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 175 Query 133097 CCTT-TTCTT 133105 |||| ||||| Sbjct 174 CCTTCTTCTT 165 >seq117972 Length=685 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| || || |||||||| || || | || || || ||| | Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | ||| | || | ||||||| |||||||| || ||||| | || ||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || |||| ||||||||| || |||| || | || || || ||||||||| Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||||| ||| | || ||||||| || || ||||| ||||| || Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 274 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || ||||| || || || || ||||| || | || || || || | Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | ||| | |||| ||||||| ||||||||||| || || | || || Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || || || || |||| || | ||||| || ||| ||||| Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| ||||| ||| | || || |||||||| ||||| Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGT 57 >seq218964 Length=932 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 |||||||| || ||||| ||||| |||||||| |||||||| || | || || || | Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 |||||| | ||| | |||| ||||| | ||||| || || ||||| | || Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 756 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || | |||| ||| || || || |||| |||| ||||| || |||||| Sbjct 757 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTAC 816 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| ||| | || || || |||| ||||| Sbjct 817 AACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGT 855 >seq197295 Length=1118 Score = 96.9 bits (106), Expect = 3e-15 Identities = 112/151 (74%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATAC 133441 |||| || | ||| || || || | ||||||||||| || || |||||||| ||||| Sbjct 395 CCTTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCT 336 Query 133442 TCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501 ||| ||||| | |||||| || || || || || || || | |||||||| | ||||| Sbjct 335 GCCATATGTCGGGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACA 276 Query 133502 GCGGCTCCGCTTGGGGGTCGAACGGCTTCTC 133532 | ||||| ||| ||||| |||| ||||| Sbjct 275 GAGGCTCAAGTTGTGGGTCAAACGTTTTCTC 245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498154765308160