Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 143 3e-29
seq213871 132 5e-26
seq117972 125 7e-24
seq218964 107 2e-18
seq197295 96.9 3e-15
>seq21365
Length=2821
Score = 143 bits (158), Expect = 3e-29
Identities = 256/374 (68%), Gaps = 0/374 (0%)
Strand=Plus/Plus
Query 62341 AACGGATCGGACAGGGTCCAGCCGCCGATGGAGGGCAGCACGCGCAGGTGCGGGTGCGCT 62400
|| ||||||| || ||||| || || || ||||| || | || | ||| | |||
Sbjct 960 AAAGGATCGGCAAGCGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCT 1019
Query 62401 TTCTTGATGGCCATCAGCTGGCCGAAGTTGCCCTTGTACGGCTCGCTCCACGCGGTCACG 62460
| || | | ||| | ||||| |||||||| ||||| |||||| |||| | | ||
Sbjct 1020 TGTTTTAGTGACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAAT 1079
Query 62461 CCCTTTTGCGGCTTTTGCACGGCCGCCCACGGGTCGTGCACCGCCAGTTTGAAGTCGTCG 62520
|| ||||| || ||||| | || ||||| || ||||| | | | ||||||||| ||
Sbjct 1080 CCTTTTTGTGGTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCA 1139
Query 62521 CGGCCCGCGCACGAGCGCTGCAGCGCCTCGAAGCTGCCCGCGATGGACTTGAGGCTGTCG 62580
||||| || || || ||||| || | ||| ||||| |||| || | ||| ||
Sbjct 1140 CGGCCGCTACAGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCA 1199
Query 62581 TTGATGCCGTCCCCGCCGCACATCGGCACGAAGCCGTACAGCAGATGCGTGAGGTTGGGC 62640
|| |||||||| |||||||| || || | ||||| || |||| ||| || || || ||
Sbjct 1200 TTTATGCCGTCACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGT 1259
Query 62641 ACGGGCACCTTGTCGGCGGGAAACTCGCGTCCGTACACGCCCCACTCGACGAAATAGGCG 62700
| || | || |||| || | | ||| || ||||| || ||||| ||||||
Sbjct 1260 ATAGGTATACGATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCG 1319
Query 62701 CCCACCACCTTGCC 62714
||||| || || ||
Sbjct 1320 CCCACAACTTTTCC 1333
>seq213871
Length=423
Score = 132 bits (146), Expect = 5e-26
Identities = 144/190 (76%), Gaps = 1/190 (1%)
Strand=Plus/Minus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
|||| ||||| ||||| ||||| ||||||||||| || |||||||| | ||| |||||||
Sbjct 354 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTT 295
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| | ||||||||| | || || ||||| || || || | ||||| || ||||| ||||
Sbjct 294 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAG 235
Query 133037 CCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGG 133096
| | | || || || || ||||| |||||| ||||||| | | |||||| || |
Sbjct 234 CGATAATACGTTCTCCAAATGTGGCAGTCTTGCTGCCGATCCACTGTAACGCCCAGTCTG 175
Query 133097 CCTT-TTCTT 133105
|||| |||||
Sbjct 174 CCTTCTTCTT 165
>seq117972
Length=685
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| || || ||||| || || |||||||| || || | || || || ||| |
Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | ||| | || | ||||||| |||||||| || ||||| | || |||
Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
|| || || |||| ||||||||| || |||| || | || || || |||||||||
Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||||| ||| | || ||||||| || || ||||| ||||| ||
Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 274
Score = 89.7 bits (98), Expect = 5e-13
Identities = 150/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || || || ||||| || || || || ||||| || | || || || || |
Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214
Query 38303 CGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|| | | ||| | |||| ||||||| ||||||||||| || || | || ||
Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || || || || |||| || | ||||| || ||| |||||
Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| ||||| ||| | || || |||||||| |||||
Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGT 57
>seq218964
Length=932
Score = 107 bits (118), Expect = 2e-18
Identities = 155/219 (71%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|||||||| || ||||| ||||| |||||||| |||||||| || | || || || |
Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696
Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360
|||||| | ||| | |||| ||||| | ||||| || || ||||| | ||
Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGAT 756
Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420
||||| || | |||| ||| || || || |||| |||| ||||| || ||||||
Sbjct 757 CAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTAC 816
Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| ||||| ||| | || || || |||| |||||
Sbjct 817 AACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGT 855
>seq197295
Length=1118
Score = 96.9 bits (106), Expect = 3e-15
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 133382 CCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATAC 133441
|||| || | ||| || || || | ||||||||||| || || |||||||| |||||
Sbjct 395 CCTTAGATAAGTCTACTTCTTCTGCAGTCCAAAACGATGCTTCAGCTTTTTTATACATCT 336
Query 133442 TCCACATGTCCGAATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACA 133501
||| ||||| | |||||| || || || || || || || | |||||||| | |||||
Sbjct 335 GCCATATGTCGGGATATTGGATTGGGAATATAACGAAACGTCTAGGGTTTTCTCTCAACA 276
Query 133502 GCGGCTCCGCTTGGGGGTCGAACGGCTTCTC 133532
| ||||| ||| ||||| |||| |||||
Sbjct 275 GAGGCTCAAGTTGTGGGTCAAACGTTTTCTC 245
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 498154765308160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |