Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 125 9e-24
>seq5177
Length=4331
Score = 125 bits (138), Expect = 9e-24
Identities = 585/918 (64%), Gaps = 48/918 (5%)
Strand=Plus/Plus
Query 112101 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 112160
||| | ||||| |||||||| || ||||| || || || || || ||||| ||||
Sbjct 2499 GCTTTATGGATACCAGATCTGTTTATGAAAAGGGTAGAAAAGGATGAAGATTGGAGTCTC 2558
Query 112161 TTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG--GGTGAGGAGTTTGAAGCCC 112218
| ||||| | | || || ||| | || | || || ||||| || |||||||
Sbjct 2559 ATGTGTCCTCATGATTGTCCTGGCCTCGCTGA--CTGTTACGGAGAGGAATTCGAAGCCC 2616
Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG-GTGCCAGCTGCCGATGTG 112277
| || | || || || ||||||| ||| | | ||| || |||| || |
Sbjct 2617 TATATGCCAAATATGAAGAAGAAAAACGGTTTA-TAAAACGAGTCAGAGCTCAAGAGTTA 2675
Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337
||||| ||||| | | ||||| ||||||||||||||||||||| | || || ||
Sbjct 2676 TGGAAGTCTATTATAGAAGCTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGAT 2735
Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397
|| || ||| ||||||||||||||| ||| | || || || || ||| || ||
Sbjct 2736 GCTTGCAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 2795
Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457
|| || | || ||| || ||||||| ||| ||||| ||||| || || ||
Sbjct 2796 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 2855
Query 112458 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 112517
|| || || || ||| || | || |||| || | ||||| | | |||
Sbjct 2856 GCACTTAACATGTTTGT------TGAAAATAATCGATTTAGTTTTAAAAAATTAAAAGAA 2909
Query 112518 GTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 112576
| || || | ||| || |||| |||||| ||| |||||| || ||||| || ||
Sbjct 2910 ATCACTAAGATTGTGACTCAAAATTTAAACAAAGTCATTGATGTTAACTTTTATCCTGTC 2969
Query 112577 --TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGT 112634
||| || | || |||||||| |||||||| || ||| | ||||| || |||
Sbjct 2970 CCTGA---AGCAAAAACTTCAAATATGAGGCACCGTCCTATCGGTATTGGTGTTCAGGGT 3026
Query 112635 CTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC 112694
| || ||| ||| | ||| | | | | || ||| ||| || |||| |
Sbjct 3027 ATGGCAGATACATT-----TGTGTTGATGAG-AATACCTTACGA--AAGTGA--GAAAGC 3076
Query 112695 AATGCGCGT----------ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744
||| | | | |||||||| ||||| ||| | | || | || || ||||
Sbjct 3077 AATACTCCTTAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTG 3136
Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804
|| || ||||| || ||| |||| || | | | || ||||||| |||||
Sbjct 3137 TGAATTAGCAGAAAAAGAAGGTGCATACAGCACATATCAAGGAAGTCCAGCTAGCCAAGG 3196
Query 112805 GGTGCTTCAATTTGATATGTGG---GAAGGTGAGACCAAGCTTCACTACGACTGGGACGC 112861
| || || | |||||||||| || | || | ||| | ||||||| |
Sbjct 3197 TATCCTCCAGTATGATATGTGGAACAAAACTCCTACAGACCTT---TGGGACTGGGCTGT 3253
Query 112862 TCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 112919
||||| ||| || ||| | | ||| | ||||| ||| ||||| ||||| |||
Sbjct 3254 CCTCAAAGAAAAGATAGCAA--AACATGGTTTGCGTAATTCTCTATTGATAGCACCTATG 3311
Query 112920 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACG 112979
|| || ||||| || |||||||| | || || | ||||| |||||||| | || |
Sbjct 3312 CCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCATTTACATCA 3371
Query 112980 AACATCTATCTGAGAAGA 112997
|| || || | ||||||
Sbjct 3372 AATATTTACCAAAGAAGA 3389
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618237906157280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |