Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq5177 125 9e-24 >seq5177 Length=4331 Score = 125 bits (138), Expect = 9e-24 Identities = 585/918 (64%), Gaps = 48/918 (5%) Strand=Plus/Plus Query 112101 GCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTC 112160 ||| | ||||| |||||||| || ||||| || || || || || ||||| |||| Sbjct 2499 GCTTTATGGATACCAGATCTGTTTATGAAAAGGGTAGAAAAGGATGAAGATTGGAGTCTC 2558 Query 112161 TTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTG--GGTGAGGAGTTTGAAGCCC 112218 | ||||| | | || || ||| | || | || || ||||| || ||||||| Sbjct 2559 ATGTGTCCTCATGATTGTCCTGGCCTCGCTGA--CTGTTACGGAGAGGAATTCGAAGCCC 2616 Query 112219 TCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACG-GTGCCAGCTGCCGATGTG 112277 | || | || || || ||||||| ||| | | ||| || |||| || | Sbjct 2617 TATATGCCAAATATGAAGAAGAAAAACGGTTTA-TAAAACGAGTCAGAGCTCAAGAGTTA 2675 Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||||| ||||| | | ||||| ||||||||||||||||||||| | || || || Sbjct 2676 TGGAAGTCTATTATAGAAGCTCAAGTGGAGACTGGTACACCATATATGTTGTATAAGGAT 2735 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 || || ||| ||||||||||||||| ||| | || || || || ||| || || Sbjct 2736 GCTTGCAACAGAAAGAGTAATCAAAAAAATCTTGGCACTATTAAATGTAGCAATCTTTGC 2795 Query 112398 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 112457 || || | || ||| || ||||||| ||| ||||| ||||| || || || Sbjct 2796 ACTGAGGTTGTGCAATACACTTCAGAAGATGAAGTGGCAGTGTGCAACCTTGCTTCCATA 2855 Query 112458 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAA 112517 || || || || ||| || | || |||| || | ||||| | | ||| Sbjct 2856 GCACTTAACATGTTTGT------TGAAAATAATCGATTTAGTTTTAAAAAATTAAAAGAA 2909 Query 112518 GTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT- 112576 | || || | ||| || |||| |||||| ||| |||||| || ||||| || || Sbjct 2910 ATCACTAAGATTGTGACTCAAAATTTAAACAAAGTCATTGATGTTAACTTTTATCCTGTC 2969 Query 112577 --TGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGT 112634 ||| || | || |||||||| |||||||| || ||| | ||||| || ||| Sbjct 2970 CCTGA---AGCAAAAACTTCAAATATGAGGCACCGTCCTATCGGTATTGGTGTTCAGGGT 3026 Query 112635 CTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATC 112694 | || ||| ||| | ||| | | | | || ||| ||| || |||| | Sbjct 3027 ATGGCAGATACATT-----TGTGTTGATGAG-AATACCTTACGA--AAGTGA--GAAAGC 3076 Query 112695 AATGCGCGT----------ATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTC 112744 ||| | | | |||||||| ||||| ||| | | || | || || |||| Sbjct 3077 AATACTCCTTAATCAACAAATATTTGAAACAATTTATTATGGTGCATTAGAAGCTAGTTG 3136 Query 112745 GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 || || ||||| || ||| |||| || | | | || ||||||| ||||| Sbjct 3137 TGAATTAGCAGAAAAAGAAGGTGCATACAGCACATATCAAGGAAGTCCAGCTAGCCAAGG 3196 Query 112805 GGTGCTTCAATTTGATATGTGG---GAAGGTGAGACCAAGCTTCACTACGACTGGGACGC 112861 | || || | |||||||||| || | || | ||| | ||||||| | Sbjct 3197 TATCCTCCAGTATGATATGTGGAACAAAACTCCTACAGACCTT---TGGGACTGGGCTGT 3253 Query 112862 TCTCAAGGAACGCAT--CAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 112919 ||||| ||| || ||| | | ||| | ||||| ||| ||||| ||||| ||| Sbjct 3254 CCTCAAAGAAAAGATAGCAA--AACATGGTTTGCGTAATTCTCTATTGATAGCACCTATG 3311 Query 112920 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACG 112979 || || ||||| || |||||||| | || || | ||||| |||||||| | || | Sbjct 3312 CCGACTGCCTCTACTGCACAAATTCTTGGCAACACTGAATCTTTTGAACCATTTACATCA 3371 Query 112980 AACATCTATCTGAGAAGA 112997 || || || | |||||| Sbjct 3372 AATATTTACCAAAGAAGA 3389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618237906157280