Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 416 2e-111
seq117972 183 2e-41
seq218964 170 2e-37
seq153336 138 9e-28
seq131538 114 1e-20
seq223011 89.7 4e-13
>seq21365
Length=2821
Score = 416 bits (460), Expect = 2e-111
Identities = 867/1274 (68%), Gaps = 27/1274 (2%)
Strand=Plus/Plus
Query 42264 GCGTTCAACAAATCGCCGTTGTCAGCGTCAATCTCCCAAGCAAACAATCCGCCTAAATCA 42323
|| |||| | ||| |||||||| ||||| || ||||||||||| | || |||| |
Sbjct 150 GCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCACCTAGTTTG 209
Query 42324 TTTTCGATCACATATTGCGCTTTGTCCAACACCGATTCGGCGCTGTCATAACTAATCAAA 42383
|| | ||||||||| | || || | || ||| || ||||||| | | |||
Sbjct 210 TTATTTCTCACATATTTACCCTTTTCAATAACTGATCTAGCATTGTCATAGGTTA-CAAG 268
Query 42384 TTCCCC-GTATCTTGTTGAAAGACATACGCGGCTTTTGCCGTTTTATCATATGTGTATTC 42442
|| || || | || |||||||| | |||| || || || || ||||
Sbjct 269 GTCTCCAGTTGATGGTCTGAAGACATAAGGAGCTTGGGCGACATTGTCGTAATGAAATTC 328
Query 42443 GTAAT--CTTTTAG--ATT--ATTTTTAATCTGTCTATAGTCTACGACGCCATCTTCCCA 42496
| | | || || ||| ||| ||||| ||| || || || || || |||| |||
Sbjct 329 CCACTTGCCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCCGTCTTGCCA 388
Query 42497 AGTACCCGAAACTGGACCTGTCGCAATACCCGTGAAGGGATTATTGTTTTGGTAATTGCT 42556
|||||| || || || || || | || ||||||||| | |||| || |||||
Sbjct 389 AGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTCGTAATCATG 448
Query 42557 TACTCCGGTCCAACCTCGTCCGTACATGGCCACGCCTAAAATTATTTTTTGAGGTTTCAC 42616
|| || |||||||| || || |||||||| || ||||| | || || | ||| |||||
Sbjct 449 AACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTCTTAGGATTCAC 508
Query 42617 TTTTTGTTTCAA-AAGCGTTTGAACGGCATAATCTGCCGTGTAATGTTCGTTTTCGTTCC 42675
| ||| ||| ||| ||| | | | | || | |||||| ||| || ||||
Sbjct 509 TCCCTGTGCCAACAAGTATTTTA-CTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCC 567
Query 42676 ATTCGGGAGCATACAGATTTGTTTGATGGCCCAAATCTGAATTTGACCAAGCACCTTTAA 42735
|| | || || |||| ||||||||| || | | ||||||||| || || || |
Sbjct 568 ATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTTGACCAGGCTCCCTTGA 627
Query 42736 AGTCATAGCTCATTAAAAATATTTTATCCAAATAGTTTTGAGCATCGTTGTAATCGACAA 42795
||||||| ||||| || || || | ||||| ||| |||||||| | | ||| || ||||
Sbjct 628 AGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAA 687
Query 42796 TAGCGATTTTGTCGTCTCCCGCACTAATTGCGCTAGTCAATTCGTATTT---GCGATTAG 42852
|||||| || ||| | ||||| || ||||||||||||||| || |||
Sbjct 688 CTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATTTCTTGCCATTCT 747
Query 42853 TTTCGTTTTCTAGTTCGTCCAGCATGTCGCGCAATTCTCGTAACAAAACTACATACGTAA 42912
| | | || || || ||||| || || |||||| | |||| |||||| |
Sbjct 748 TAGC---TGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACATAACAAT 804
Query 42913 GACCGTCATTTTGAGGATCTCCAATTGTC-GGATTAGCTCCTTTACCACCGGGAAATTCC 42971
||| || || || | || | ||| || ||||| ||||||||||| ||||| |||
Sbjct 805 CACCATC-TTCTGGG---CTACCGAGGTCAGGGTTAGCACCTTTACCACCAGGAAACTCC 860
Query 42972 CAATCAATATCGACGCCGTCAAAAAATTTCCAAGTGAGCAAAAACTCACGTACTGAATCC 43031
||||| ||||| || || || || |||||||| || || | |||||| |||||| | |
Sbjct 861 CAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTTTACTGACTGC 920
Query 43032 ACAAATATTTTACGCTTG--TTTGCATCGCTGAAAAAATAAAACGGGTCGGACAATGTCC 43089
|||||| | | | || |||| || ||||| | || || |||| | ||||
Sbjct 921 ACAAATCGTGTTCTTTTAGATTTG--TCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCC 978
Query 43090 ATCCACCTATCGAAGGTAACACTTTAAGATGAGGGTTAGCTTTTTTGGCTGCCATTAATT 43149
| ||||| ||||| || | | || | | |||| |||| ||| || ||||||||
Sbjct 979 ACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATT 1038
Query 43150 GACCAAAGTTGCCTTTGTACGGTTCATTCCACGAGGAAACACCTTTTTGTGGTTTCTGTA 43209
| ||||||||||||||||| || || ||||| || || | |||||||||||||| ||||
Sbjct 1039 GGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTA 1098
Query 43210 TAGCCGCCCACGGATCGTGTATGGAAACTTTGAAGTCGCTTCGACCCGCACAAGATTTTT 43269
|| ||||| |||||||| || || ||||||||||| || || ||| || ||
Sbjct 1099 ATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGTT 1158
Query 43270 GAAGAGCTTCAAAACTGCCAGGAATAGATTTTAAACTGTCATTAATGCCGTCACCGCCGC 43329
| || |||| |||||||| || |||||| || ||||| ||||||||||||||||
Sbjct 1159 GCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTATGCCGTCACCGCCGC 1218
Query 43330 ATATCGGAATAAATCCGTACAACAAATGAGACAAATTGGGTAAAGGCACTTTGTTGACAG 43389
| || |||||||| || || | |||||||| | ||| |||| ||| | | || |
Sbjct 1219 AAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGG 1278
Query 43390 GAAATGAACGACCGTATACGCCCCATTCTACAAAATAAGCGGCCACGGCTTTATC-GGTG 43448
| ||| | | ||| || ||||||||||| || || ||| |||| |||| | | ||
Sbjct 1279 GGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCACAACTTTTCCAGATG 1338
Query 43449 CCCAATTCGAAAGGTTTATTGTTTTCTTGCCATGTATATGGCAAAGGATCTAAATGCGAA 43508
|| ||| |||||||| |||||| | |||||||| ||||||| ||||||
Sbjct 1339 TTTGCTT-GAATGGTTTATTTTTTTCTCCCAATGTATATTCCAAAGGAAGTAAATGACTT 1397
Query 43509 CCGTCCGTATCAGC 43522
|| || ||||| ||
Sbjct 1398 CCATCAGTATCGGC 1411
>seq117972
Length=685
Score = 183 bits (202), Expect = 2e-41
Identities = 178/229 (78%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| || | | ||| || || |||||||| |||||||||||||| || ||||||||||
Sbjct 44 TTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGG 103
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| ||| | |||| |||||||||||||| ||||| || | ||||| ||||| || |
Sbjct 104 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTG 163
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
| ||||| ||||| ||||| ||||| ||||||| |||| | ||| ||||| | |||||
Sbjct 164 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 223
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| ||||| | || || || |||| ||||| ||||| ||||||||
Sbjct 224 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
Score = 170 bits (188), Expect = 2e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| ||||||||||| | |||||||| | |||||||||||||| || ||||| || |
Sbjct 272 TTCCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG 331
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| || | |||| ||||||||||| || || || || | ||| |||||||| || |
Sbjct 332 AAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAG 391
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
||||||||||||| ||||| ||||| |||||| |||| | |||||||| | ||| |
Sbjct 392 GAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAA 451
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| | ||| | |||||||| || | ||||| ||||| || |||||
Sbjct 452 CTTCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500
>seq218964
Length=932
Score = 170 bits (188), Expect = 2e-37
Identities = 175/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| || | || ||| || || | ||||| |||||||||||||| || ||||| || |
Sbjct 868 TTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTG 809
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| ||| | | | || ||||||||||| || || || |||||||| |||||||| || |
Sbjct 808 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 749
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
|||||||||| || ||||||||||| ||||||| |||| | |||||| || | ||| |
Sbjct 748 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| | ||| | ||||| || || | ||||| || || ||||||||
Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq153336
Length=250
Score = 138 bits (152), Expect = 9e-28
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300
|||| || |||| ||| || ||||| || | |||||||| || || || || || || |
Sbjct 4 TTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCG 63
Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360
| || | |||| |||| |||||| || || || ||||| | ||||| || || |
Sbjct 64 ACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAG 123
Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420
|||||||||| || |||||||| ||| || ||| |||| | || ||||| | |||||
Sbjct 124 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCA 183
Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|||| | ||| | ||||| || |||| ||||||||||| || |||||
Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
>seq131538
Length=717
Score = 114 bits (126), Expect = 1e-20
Identities = 105/133 (79%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| ||||||||||| || ||||||||||| | | |||| |||| || | ||||
Sbjct 133 TGAAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGC 74
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
||||| ||||| ||||| | |||||| || || |||||||||||||| || |||||||||
Sbjct 73 TTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGAATTTTT 14
Query 101387 TGTTTTACAATTT 101399
|| ||| |||
Sbjct 13 GCCTTAACATTTT 1
>seq223011
Length=328
Score = 89.7 bits (98), Expect = 4e-13
Identities = 106/144 (74%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 84561 TTCCACGTTTCCCAAATCACCAACATGTCGTATGGGCGAGTCAGGTCCCCCGTGATCCAT 84620
||| | ||||||||| ||||||||||||| | | ||||||||| || || || ||| |
Sbjct 257 TTCAATGTTTCCCAAGTCACCAACATGTCTGACCGACGAGTCAGGACCTCCATGGTCCTT 198
Query 84621 ATTGGTGGGATTAAAGTGTTCGCCTGCAGATGTACAACCGTTACTGATGTCGCCAAATTC 84680
|| ||||| ||||| || || || || || || || || |||| ||||| ||
Sbjct 197 TTTTAGAGGATTGAAGTGAGGACCAGCTGAGGTGCAGCCATTTGTGTTGTCACCAAACTC 138
Query 84681 GTGTACATGCATGCCGTGTTTACC 84704
||| ||||| | ||| ||||||||
Sbjct 137 GTGGACATGAAAGCCATGTTTACC 114
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 394719516810318
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |