Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq21365 416 2e-111 seq117972 183 2e-41 seq218964 170 2e-37 seq153336 138 9e-28 seq131538 114 1e-20 seq223011 89.7 4e-13 >seq21365 Length=2821 Score = 416 bits (460), Expect = 2e-111 Identities = 867/1274 (68%), Gaps = 27/1274 (2%) Strand=Plus/Plus Query 42264 GCGTTCAACAAATCGCCGTTGTCAGCGTCAATCTCCCAAGCAAACAATCCGCCTAAATCA 42323 || |||| | ||| |||||||| ||||| || ||||||||||| | || |||| | Sbjct 150 GCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCACCTAGTTTG 209 Query 42324 TTTTCGATCACATATTGCGCTTTGTCCAACACCGATTCGGCGCTGTCATAACTAATCAAA 42383 || | ||||||||| | || || | || ||| || ||||||| | | ||| Sbjct 210 TTATTTCTCACATATTTACCCTTTTCAATAACTGATCTAGCATTGTCATAGGTTA-CAAG 268 Query 42384 TTCCCC-GTATCTTGTTGAAAGACATACGCGGCTTTTGCCGTTTTATCATATGTGTATTC 42442 || || || | || |||||||| | |||| || || || || |||| Sbjct 269 GTCTCCAGTTGATGGTCTGAAGACATAAGGAGCTTGGGCGACATTGTCGTAATGAAATTC 328 Query 42443 GTAAT--CTTTTAG--ATT--ATTTTTAATCTGTCTATAGTCTACGACGCCATCTTCCCA 42496 | | | || || ||| ||| ||||| ||| || || || || || |||| ||| Sbjct 329 CCACTTGCCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCCGTCTTGCCA 388 Query 42497 AGTACCCGAAACTGGACCTGTCGCAATACCCGTGAAGGGATTATTGTTTTGGTAATTGCT 42556 |||||| || || || || || | || ||||||||| | |||| || ||||| Sbjct 389 AGTACCTTTGACAGGTCCAGTAGCGTTGCCTGTGAAGGGAATGTTGTCTTCGTAATCATG 448 Query 42557 TACTCCGGTCCAACCTCGTCCGTACATGGCCACGCCTAAAATTATTTTTTGAGGTTTCAC 42616 || || |||||||| || || |||||||| || ||||| | || || | ||| ||||| Sbjct 449 AACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTCTTAGGATTCAC 508 Query 42617 TTTTTGTTTCAA-AAGCGTTTGAACGGCATAATCTGCCGTGTAATGTTCGTTTTCGTTCC 42675 | ||| ||| ||| ||| | | | | || | |||||| ||| || |||| Sbjct 509 TCCCTGTGCCAACAAGTATTTTA-CTCCGAAGTCAGATGTGTAAGTTTCCTTGGGATTCC 567 Query 42676 ATTCGGGAGCATACAGATTTGTTTGATGGCCCAAATCTGAATTTGACCAAGCACCTTTAA 42735 || | || || |||| ||||||||| || | | ||||||||| || || || | Sbjct 568 ATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTTGACCAGGCTCCCTTGA 627 Query 42736 AGTCATAGCTCATTAAAAATATTTTATCCAAATAGTTTTGAGCATCGTTGTAATCGACAA 42795 ||||||| ||||| || || || | ||||| ||| |||||||| | | ||| || |||| Sbjct 628 AGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCGTAGTCAACAA 687 Query 42796 TAGCGATTTTGTCGTCTCCCGCACTAATTGCGCTAGTCAATTCGTATTT---GCGATTAG 42852 |||||| || ||| | ||||| || ||||||||||||||| || ||| Sbjct 688 CTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATTTCTTGCCATTCT 747 Query 42853 TTTCGTTTTCTAGTTCGTCCAGCATGTCGCGCAATTCTCGTAACAAAACTACATACGTAA 42912 | | | || || || ||||| || || |||||| | |||| |||||| | Sbjct 748 TAGC---TGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACATAACAAT 804 Query 42913 GACCGTCATTTTGAGGATCTCCAATTGTC-GGATTAGCTCCTTTACCACCGGGAAATTCC 42971 ||| || || || | || | ||| || ||||| ||||||||||| ||||| ||| Sbjct 805 CACCATC-TTCTGGG---CTACCGAGGTCAGGGTTAGCACCTTTACCACCAGGAAACTCC 860 Query 42972 CAATCAATATCGACGCCGTCAAAAAATTTCCAAGTGAGCAAAAACTCACGTACTGAATCC 43031 ||||| ||||| || || || || |||||||| || || | |||||| |||||| | | Sbjct 861 CAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTTTACTGACTGC 920 Query 43032 ACAAATATTTTACGCTTG--TTTGCATCGCTGAAAAAATAAAACGGGTCGGACAATGTCC 43089 |||||| | | | || |||| || ||||| | || || |||| | |||| Sbjct 921 ACAAATCGTGTTCTTTTAGATTTG--TCAACTAAAAAGAAGAAAGGATCGGCAAGCGTCC 978 Query 43090 ATCCACCTATCGAAGGTAACACTTTAAGATGAGGGTTAGCTTTTTTGGCTGCCATTAATT 43149 | ||||| ||||| || | | || | | |||| |||| ||| || |||||||| Sbjct 979 ACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGTTTTAGTGACATTAATT 1038 Query 43150 GACCAAAGTTGCCTTTGTACGGTTCATTCCACGAGGAAACACCTTTTTGTGGTTTCTGTA 43209 | ||||||||||||||||| || || ||||| || || | |||||||||||||| |||| Sbjct 1039 GGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTGGTTTTTGTA 1098 Query 43210 TAGCCGCCCACGGATCGTGTATGGAAACTTTGAAGTCGCTTCGACCCGCACAAGATTTTT 43269 || ||||| |||||||| || || ||||||||||| || || ||| || || Sbjct 1099 ATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTACAGGACCGTT 1158 Query 43270 GAAGAGCTTCAAAACTGCCAGGAATAGATTTTAAACTGTCATTAATGCCGTCACCGCCGC 43329 | || |||| |||||||| || |||||| || ||||| |||||||||||||||| Sbjct 1159 GCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTATGCCGTCACCGCCGC 1218 Query 43330 ATATCGGAATAAATCCGTACAACAAATGAGACAAATTGGGTAAAGGCACTTTGTTGACAG 43389 | || |||||||| || || | |||||||| | ||| |||| ||| | | || | Sbjct 1219 AAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATACGATCCACGG 1278 Query 43390 GAAATGAACGACCGTATACGCCCCATTCTACAAAATAAGCGGCCACGGCTTTATC-GGTG 43448 | ||| | | ||| || ||||||||||| || || ||| |||| |||| | | || Sbjct 1279 GGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCACAACTTTTCCAGATG 1338 Query 43449 CCCAATTCGAAAGGTTTATTGTTTTCTTGCCATGTATATGGCAAAGGATCTAAATGCGAA 43508 || ||| |||||||| |||||| | |||||||| ||||||| |||||| Sbjct 1339 TTTGCTT-GAATGGTTTATTTTTTTCTCCCAATGTATATTCCAAAGGAAGTAAATGACTT 1397 Query 43509 CCGTCCGTATCAGC 43522 || || ||||| || Sbjct 1398 CCATCAGTATCGGC 1411 >seq117972 Length=685 Score = 183 bits (202), Expect = 2e-41 Identities = 178/229 (78%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || | | ||| || || |||||||| |||||||||||||| || |||||||||| Sbjct 44 TTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGG 103 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | |||| |||||||||||||| ||||| || | ||||| ||||| || | Sbjct 104 AAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTG 163 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 | ||||| ||||| ||||| ||||| ||||||| |||| | ||| ||||| | ||||| Sbjct 164 GGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCA 223 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| ||||| | || || || |||| ||||| ||||| |||||||| Sbjct 224 CTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 Score = 170 bits (188), Expect = 2e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| ||||||||||| | |||||||| | |||||||||||||| || ||||| || | Sbjct 272 TTCCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAG 331 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| ||||||||||| || || || || | ||| |||||||| || | Sbjct 332 AAAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAG 391 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 ||||||||||||| ||||| ||||| |||||| |||| | |||||||| | ||| | Sbjct 392 GAATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAA 451 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | ||| | |||||||| || | ||||| ||||| || ||||| Sbjct 452 CTTCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 >seq218964 Length=932 Score = 170 bits (188), Expect = 2e-37 Identities = 175/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || | || ||| || || | ||||| |||||||||||||| || ||||| || | Sbjct 868 TTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTG 809 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | ||| | | | || ||||||||||| || || || |||||||| |||||||| || | Sbjct 808 AAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAG 749 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || ||||||||||| ||||||| |||| | |||||| || | ||| | Sbjct 748 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAA 689 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | ||| | ||||| || || | ||||| || || |||||||| Sbjct 688 CTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640 >seq153336 Length=250 Score = 138 bits (152), Expect = 9e-28 Identities = 168/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || |||| ||| || ||||| || | |||||||| || || || || || || | Sbjct 4 TTCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCG 63 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| |||| |||||| || || || ||||| | ||||| || || | Sbjct 64 ACAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAG 123 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||||||||| || |||||||| ||| || ||| |||| | || ||||| | ||||| Sbjct 124 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCA 183 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| | ||| | ||||| || |||| ||||||||||| || ||||| Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 >seq131538 Length=717 Score = 114 bits (126), Expect = 1e-20 Identities = 105/133 (79%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||| ||||||||||| || ||||||||||| | | |||| |||| || | |||| Sbjct 133 TGAAGAGTAGATTCTTTCTGAATATTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGC 74 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 ||||| ||||| ||||| | |||||| || || |||||||||||||| || ||||||||| Sbjct 73 TTACCGGCAAAAATCAACCTCTGTTGGTCTGGAGGAATGCCTTCTTTGTCCTGAATTTTT 14 Query 101387 TGTTTTACAATTT 101399 || ||| ||| Sbjct 13 GCCTTAACATTTT 1 >seq223011 Length=328 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 84561 TTCCACGTTTCCCAAATCACCAACATGTCGTATGGGCGAGTCAGGTCCCCCGTGATCCAT 84620 ||| | ||||||||| ||||||||||||| | | ||||||||| || || || ||| | Sbjct 257 TTCAATGTTTCCCAAGTCACCAACATGTCTGACCGACGAGTCAGGACCTCCATGGTCCTT 198 Query 84621 ATTGGTGGGATTAAAGTGTTCGCCTGCAGATGTACAACCGTTACTGATGTCGCCAAATTC 84680 || ||||| ||||| || || || || || || || || |||| ||||| || Sbjct 197 TTTTAGAGGATTGAAGTGAGGACCAGCTGAGGTGCAGCCATTTGTGTTGTCACCAAACTC 138 Query 84681 GTGTACATGCATGCCGTGTTTACC 84704 ||| ||||| | ||| |||||||| Sbjct 137 GTGGACATGAAAGCCATGTTTACC 114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394719516810318