Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq21365 187 2e-42 seq2512 167 2e-36 seq117972 132 4e-26 seq218964 116 3e-21 seq153336 98.7 8e-16 seq149208 93.3 3e-14 >seq21365 Length=2821 Score = 187 bits (206), Expect = 2e-42 Identities = 483/731 (66%), Gaps = 9/731 (1%) Strand=Plus/Minus Query 27695 GGAACCGTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAG-ACAGTATCCGGC 27753 |||| || |||| ||| ||||| || || |||||||| || ||| | | | ||| Sbjct 1333 GGAAAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTG 1274 Query 27754 CAACAAACTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGG 27813 | | | |||| ||||| ||||| || |||||||| || |||||| | ||||||||||| Sbjct 1273 GATCGTA-TACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGG 1215 Query 27814 CGGAGACGGTATCAACGATAGCCTAAAACAGATCCCCAATTC--TTTTGAGGTCCTCCAA 27871 ||| ||||| || || |||||| ||||| |||| | || | ||| | | || ||| Sbjct 1214 CGGTGACGGCATAAATGATAGCTTAAAAGAGAT--CGAAGGCAGTTTCCAAGCACTGCAA 1157 Query 27872 AAGTCATGCTCAAACCGAGCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTG 27931 ||| || ||| | ||||| | || || |||||| ||||| || | Sbjct 1156 CGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTA 1097 Query 27932 CAAAAACCGCAAAAGGGTGTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAG 27991 |||||||| ||||| || | | ||||||||||| ||||| || ||||||||||| Sbjct 1096 CAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAA 1037 Query 27992 TTGATGGCCATCAAACGACACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGG 28051 || ||| | | |||| | || || | | || || |||||||||||||||||| Sbjct 1036 TTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGG 977 Query 28052 ACTCTGAGCGATCCATTCTTTTTTATGCACGACCCGGCCAAGCGTGCCGTGTTTGTAGAG 28111 || || |||||| ||||| ||| | ||| | || | | ||||| || Sbjct 976 ACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGATTTGTGCAG 917 Query 28112 TCTGTGCGCGAATTTCTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAG 28171 || || || ||||| | ||| ||||| ||||| || || || ||| | || |||||| Sbjct 916 TCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAG 857 Query 28172 TTTCCGGGTGGAAAGGGAGCCAACCCCGCGATCGGTAACCCCGACATTGACGCAAAAACG 28231 ||||| ||||| || || || ||||| | |||||| ||| || || | | Sbjct 856 TTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGT 800 Query 28232 TACACCGCGCTGTTGCGCGAACTAAGATTTATGCTGGACGAGTTGGCGGaaaaaaaCGAT 28291 || || || ||| || | ||||| || ||| | | | || || | Sbjct 799 TATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGC 740 Query 28292 CGCGTCTACCAACTAACCACCGCTATTAGCGCCGGGCATGATAAAATACAAGTGGTCAAC 28351 ||| || | || | ||||||||| | || |||||||| ||||| || || Sbjct 739 AAGAAATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGAC 680 Query 28352 TACGCTTCGGCCCAAAAACATCTGGACCACATTTTCGTTATGAGTTACGATTTTAGGGGC 28411 |||| ||| ||||| || |||| || |||||| | |||||||| || || | ||| Sbjct 679 TACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGA 620 Query 28412 GCCTGGTCCAA 28422 |||||||| || Sbjct 619 GCCTGGTCAAA 609 >seq2512 Length=3386 Score = 167 bits (184), Expect = 2e-36 Identities = 186/246 (76%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 7832 TGCTCACGTTCAAGGACTGGCCGAAGAGTATAAAGCAGAAACCAAAGCAGCTTGCCGAAG 7891 ||| || |||| |||||||| || || ||||||||||| || | || ||||| | Sbjct 1210 TGCGCAGCTTCAGCGACTGGCCCCGCAGCATGAAGCAGAAACCCGAGGAACTCGCCGAGG 1151 Query 7892 CTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCTACTGTGACGGGGGTC 7951 | ||||| | |||||| |||| || || | || ||||| |||||||||||||| || | Sbjct 1150 CGGGATTCTTCTACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGGC 1091 Query 7952 TCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGCGCTGGTTTGATAAAT 8011 |||| || |||||| | |||| | ||||||||||| |||||||||||||| || || Sbjct 1090 TCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGAT 1031 Query 8012 GCGCATATGTCAAACTAGTCAAAGGGGAG-GAATATGTTCAGAAGGTAATTACTGAAGCG 8070 |||| || ||| | || || |||||| | || ||||| |||||||| | || || ||| Sbjct 1030 GCGCTTACGTCCAGCTGGT-AAAGGGCCGAGACTATGTACAGAAGGTGGTCACGGAGGCG 972 Query 8071 TGCGCC 8076 |||||| Sbjct 971 TGCGCC 966 Score = 95.1 bits (104), Expect = 9e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 7585 CCCCAAACTATGGCCCGCAACGGGTTTTATTATTTGGGTCGAAGAGACGAGGTGCGTTGC 7644 ||| || || | || | ||||| || ||||| |||| || | || || || || ||| Sbjct 1517 CCCGAATCTCTCGCAAGGAACGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGC 1458 Query 7645 GCGTTTTGTAAAGTGGAAATCATGCGGTGGGTCGAAGGTGACGATCCGGAGAAGGACCAT 7704 |||||||||||||| ||||| ||| ||||||| || |||||||| | |||||||| Sbjct 1457 GCGTTTTGTAAAGTAGAAATTATGAAATGGGTCGCGGGCGACGATCCCGCTAAGGACCAC 1398 Query 7705 CGGAAGTGGGCACCGCAGTGTCCGTTTCTGCG 7736 | |||||| || ||||| || || ||||| Sbjct 1397 CAACGGTGGGCGCCCCAGTGCCCCTTCCTGCG 1366 >seq117972 Length=685 Score = 132 bits (146), Expect = 4e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || ||||| |||||||| || || ||||||||||| |||||||| || ||| | ||| Sbjct 55 AGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGA 114 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || ||||| |||||||| ||||| || || ||||| ||||| | || | |||||| Sbjct 115 CCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCT 174 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||||||| | | || || || | ||||| |||| ||| Sbjct 175 TTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTA 234 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || ||||| || | ||||| |||||||||||||| Sbjct 235 ATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272 >seq218964 Length=932 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || | ||| ||||| |||| || || || ||||||||||| ||||| || || Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | || |||| ||||| ||||| || || || |||| || |||||||| | ||| Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| ||| || ||||||| | | || || || | || || Sbjct 746 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 687 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| ||||| ||||| ||||| | ||||| || ||||||||||| Sbjct 686 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640 >seq153336 Length=250 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || |||||||| |||||||| || || | || || || || || || || || || Sbjct 6 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGAC 65 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || | || | || |||| ||||| ||||| || |||| || ||||| || | ||| Sbjct 66 AGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 125 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | ||| |||||||| ||||||| || ||| | | | || || || ||||| Sbjct 126 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACT 185 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | ||||| |||||||| || | |||||||||||||| ||||| Sbjct 186 TCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232 >seq149208 Length=369 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| || || ||||| || | ||| |||||| ||||||||||| ||||| Sbjct 121 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 62 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 ||| | ||| | || |||| ||||||||| || || || || || |||||||| | |||| Sbjct 61 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 2 Query 48660 A 48660 | Sbjct 1 A 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379439064574002