Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 187 2e-42
seq2512 167 2e-36
seq117972 132 4e-26
seq218964 116 3e-21
seq153336 98.7 8e-16
seq149208 93.3 3e-14
>seq21365
Length=2821
Score = 187 bits (206), Expect = 2e-42
Identities = 483/731 (66%), Gaps = 9/731 (1%)
Strand=Plus/Minus
Query 27695 GGAACCGTGGTGGCCGCTTACTTTGTCGAGTGGGGTGTGTATGGTAG-ACAGTATCCGGC 27753
|||| || |||| ||| ||||| || || |||||||| || ||| | | | |||
Sbjct 1333 GGAAAAGTTGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTG 1274
Query 27754 CAACAAACTACCCATACCAAATCTGACACATTTGCTGTACGGCTTTGTGCCCATTTGCGG 27813
| | | |||| ||||| ||||| || |||||||| || |||||| | |||||||||||
Sbjct 1273 GATCGTA-TACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGG 1215
Query 27814 CGGAGACGGTATCAACGATAGCCTAAAACAGATCCCCAATTC--TTTTGAGGTCCTCCAA 27871
||| ||||| || || |||||| ||||| |||| | || | ||| | | || |||
Sbjct 1214 CGGTGACGGCATAAATGATAGCTTAAAAGAGAT--CGAAGGCAGTTTCCAAGCACTGCAA 1157
Query 27872 AAGTCATGCTCAAACCGAGCCGACTTTAGTGTGAGCATACACGATATATGGGGCGCGCTG 27931
||| || ||| | ||||| | || || |||||| ||||| || |
Sbjct 1156 CGGTCCTGTAGCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTA 1097
Query 27932 CAAAAACCGCAAAAGGGTGTAGAGGCGTGGAACGAGCCGTACAAGGGTAACTTTGGCCAG 27991
|||||||| ||||| || | | ||||||||||| ||||| || |||||||||||
Sbjct 1096 CAAAAACCACAAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAA 1037
Query 27992 TTGATGGCCATCAAACGACACCATCCCCACCTATCCATACTGCCCTCGATTGGTGGGTGG 28051
|| ||| | | |||| | || || | | || || ||||||||||||||||||
Sbjct 1036 TTAATGTCACTAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGG 977
Query 28052 ACTCTGAGCGATCCATTCTTTTTTATGCACGACCCGGCCAAGCGTGCCGTGTTTGTAGAG 28111
|| || |||||| ||||| ||| | ||| | || | | ||||| ||
Sbjct 976 ACGCTTGCCGATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACGATTTGTGCAG 917
Query 28112 TCTGTGCGCGAATTTCTGCAAACGTGGAAGTTCTTTGACGGAGTCGATTTGGACTGGGAG 28171
|| || || ||||| | ||| ||||| ||||| || || || ||| | || ||||||
Sbjct 916 TCAGTAAAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAG 857
Query 28172 TTTCCGGGTGGAAAGGGAGCCAACCCCGCGATCGGTAACCCCGACATTGACGCAAAAACG 28231
||||| ||||| || || || ||||| | |||||| ||| || || | |
Sbjct 856 TTTCCTGGTGGTAAAGGTGCTAACCCTGACCTCGGTAGCCCAGA---AGATGGTGATTGT 800
Query 28232 TACACCGCGCTGTTGCGCGAACTAAGATTTATGCTGGACGAGTTGGCGGaaaaaaaCGAT 28291
|| || || ||| || | ||||| || ||| | | | || || |
Sbjct 799 TATGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCTCTCAGCTAAGAATGGC 740
Query 28292 CGCGTCTACCAACTAACCACCGCTATTAGCGCCGGGCATGATAAAATACAAGTGGTCAAC 28351
||| || | || | ||||||||| | || |||||||| ||||| || ||
Sbjct 739 AAGAAATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGAC 680
Query 28352 TACGCTTCGGCCCAAAAACATCTGGACCACATTTTCGTTATGAGTTACGATTTTAGGGGC 28411
|||| ||| ||||| || |||| || |||||| | |||||||| || || | |||
Sbjct 679 TACGGCAAGGCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGGGA 620
Query 28412 GCCTGGTCCAA 28422
|||||||| ||
Sbjct 619 GCCTGGTCAAA 609
>seq2512
Length=3386
Score = 167 bits (184), Expect = 2e-36
Identities = 186/246 (76%), Gaps = 2/246 (1%)
Strand=Plus/Minus
Query 7832 TGCTCACGTTCAAGGACTGGCCGAAGAGTATAAAGCAGAAACCAAAGCAGCTTGCCGAAG 7891
||| || |||| |||||||| || || ||||||||||| || | || ||||| |
Sbjct 1210 TGCGCAGCTTCAGCGACTGGCCCCGCAGCATGAAGCAGAAACCCGAGGAACTCGCCGAGG 1151
Query 7892 CTGGATTATACTACACGGGCCGCGGTGATATGACAAAGTGTTTCTACTGTGACGGGGGTC 7951
| ||||| | |||||| |||| || || | || ||||| |||||||||||||| || |
Sbjct 1150 CGGGATTCTTCTACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGGC 1091
Query 7952 TCAAAGATTGGGAGGAAAACGATATACCGTGGGAGCAACACGCGCGCTGGTTTGATAAAT 8011
|||| || |||||| | |||| | ||||||||||| |||||||||||||| || ||
Sbjct 1090 TCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGAT 1031
Query 8012 GCGCATATGTCAAACTAGTCAAAGGGGAG-GAATATGTTCAGAAGGTAATTACTGAAGCG 8070
|||| || ||| | || || |||||| | || ||||| |||||||| | || || |||
Sbjct 1030 GCGCTTACGTCCAGCTGGT-AAAGGGCCGAGACTATGTACAGAAGGTGGTCACGGAGGCG 972
Query 8071 TGCGCC 8076
||||||
Sbjct 971 TGCGCC 966
Score = 95.1 bits (104), Expect = 9e-15
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 7585 CCCCAAACTATGGCCCGCAACGGGTTTTATTATTTGGGTCGAAGAGACGAGGTGCGTTGC 7644
||| || || | || | ||||| || ||||| |||| || | || || || || |||
Sbjct 1517 CCCGAATCTCTCGCAAGGAACGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGC 1458
Query 7645 GCGTTTTGTAAAGTGGAAATCATGCGGTGGGTCGAAGGTGACGATCCGGAGAAGGACCAT 7704
|||||||||||||| ||||| ||| ||||||| || |||||||| | ||||||||
Sbjct 1457 GCGTTTTGTAAAGTAGAAATTATGAAATGGGTCGCGGGCGACGATCCCGCTAAGGACCAC 1398
Query 7705 CGGAAGTGGGCACCGCAGTGTCCGTTTCTGCG 7736
| |||||| || ||||| || || |||||
Sbjct 1397 CAACGGTGGGCGCCCCAGTGCCCCTTCCTGCG 1366
>seq117972
Length=685
Score = 132 bits (146), Expect = 4e-26
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| ||||| |||||||| || || ||||||||||| |||||||| || ||| | |||
Sbjct 55 AGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGA 114
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || ||||| |||||||| ||||| || || ||||| ||||| | || | ||||||
Sbjct 115 CCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCT 174
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| || || ||||||| | | || || || | ||||| |||| |||
Sbjct 175 TTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTA 234
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || ||||| || | ||||| ||||||||||||||
Sbjct 235 ATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCAT 272
>seq218964
Length=932
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || | ||| ||||| |||| || || || ||||||||||| ||||| || ||
Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAA 807
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | || |||| ||||| ||||| || || || |||| || |||||||| | |||
Sbjct 806 AGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGA 747
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||| |||||||| ||| || ||||||| | | || || || | || ||
Sbjct 746 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACT 687
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|||| ||||| ||||| ||||| | ||||| || |||||||||||
Sbjct 686 TCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCAT 640
>seq153336
Length=250
Score = 98.7 bits (108), Expect = 8e-16
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| |||||||| |||||||| || || | || || || || || || || || ||
Sbjct 6 CCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGAC 65
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
|| | || | || |||| ||||| ||||| || |||| || ||||| || | |||
Sbjct 66 AGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGGA 125
Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719
| ||| |||||||| ||||||| || ||| | | | || || || |||||
Sbjct 126 ATGCCTTCCTTGTCTTGAATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCACT 185
Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| | ||||| |||||||| || | |||||||||||||| |||||
Sbjct 186 TCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCAT 232
>seq149208
Length=369
Score = 93.3 bits (102), Expect = 3e-14
Identities = 93/121 (77%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599
|| || ||||| || || ||||| || | ||| |||||| ||||||||||| |||||
Sbjct 121 CCTCCTCTTAGACGTAATACCAAGTGCAAAGTGGACTCTTTCTGAATATTGTAGTCAGAG 62
Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659
||| | ||| | || |||| ||||||||| || || || || || |||||||| | ||||
Sbjct 61 AGAGTACGACCATCCTCCAGCTGCTTACCAGCGAAAATTAGACGTTGTTGATCTGGGGGA 2
Query 48660 A 48660
|
Sbjct 1 A 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379439064574002
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |