Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_019945.1
Length=132978
Score E
Sequences producing significant alignments: (Bits) Value
seq21365 255 5e-63
seq117972 127 2e-24
seq218964 104 2e-17
seq153336 91.5 1e-13
>seq21365
Length=2821
Score = 255 bits (282), Expect = 5e-63
Identities = 783/1196 (65%), Gaps = 27/1196 (2%)
Strand=Plus/Plus
Query 105818 TGTTCATGGCATTGAGTAAATCGCCGTTATCGGCATCTATTTCCCAAGCAAACAAACCGC 105877
||||||||||||| |||| ||| ||||| ||||| || |||||||||||||| | ||| |
Sbjct 142 TGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCAC 201
Query 105878 CCAGTTTGTT-TCGATCGACATATTTAACCTTGCCCAAAACAGAATCGA-CGCTATCAAA 105935
| |||||||| | || ||||||||| |||| | | ||| || || | | | ||| |
Sbjct 202 CTAGTTTGTTATTTCTC-ACATATTTACCCTTTTCAATAACTGA-TCTAGCATTGTCATA 259
Query 105936 CGAAATTAAATCCNNNNNNNNNNNNNCAAAAACGTACGAAGCTTGAGCGACATTGTCA-A 105994
| | | || || || || | |||||| ||||||||||| |
Sbjct 260 GGTTACAAGGTCTCCAGTTGATGGTCTGAAGACATAAGGAGCTTGGGCGACATTGTCGTA 319
Query 105995 ACG---TGTACACGTACGT-GTTCAGTTTTGTTTG-AATCTGTCGGTAATCTACGACGCC 106049
| | | ||| | | | | || ||| || | ||||| || |||||| || || ||
Sbjct 320 ATGAAATTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCC 379
Query 106050 GTCCTCCCAAGTGCCC--GACACGGGCCCGTTGCCGATTCCCGAAAAATAGTTGTTGCCA 106107
||| | |||||| || |||| || || || || | | || | || ||||| |
Sbjct 380 GTCTTGCCAAGTACCTTTGACA-GGTCCAGTAGC-GTTGCCTGTGAAGGGAATGTTGTCT 437
Query 106108 GTATAATTGGTCACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTATTTTG 106167
|||| ||||| ||||| || || || ||||||||||| |||| | || ||
Sbjct 438 TCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTC 497
Query 106168 TTGGGATCGACGTCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATTTTTCT 106227
|| |||| || | ||| || ||| | || || | | | |||||| ||||
Sbjct 498 TTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTCC 557
Query 106228 TCGGAATTCCAACTAGGCGCATATACCGTCGTTTGATAGCCCAGATCTGTGTTCGACCAC 106287
| || |||||| |||||| || | | ||||||| || ||| || |||||
Sbjct 558 TTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTTGACCAG 617
Query 106288 GCCCCTTTAAAATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCGTCGTTA 106347
|| || || || || |||||||| | |||||| | |||| ||| ||||| || | |
Sbjct 618 GCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCG 677
Query 106348 TAGTTTACCACGGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCGTAGAAT 106407
|||| || || ||||| || | || | ||| ||||| || ||||||||
Sbjct 678 TAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATTTC 737
Query 106408 TTGCCCGTTTGCAGTTCTAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAGCACGACA 106467
||||| | | | | || || ||||| | || || |||| || || |||
Sbjct 738 TTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACA 797
Query 106468 TATGTTTCGGCGTCGCGTTCCGCATCGCCCAAAGAAGGATTGGCCCCTTTGCCGCCTGGA 106527
|| || | || ||| | || | ||| || || ||||| || || |||
Sbjct 798 TAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTACCACCAGGA 854
Query 106528 AATTCCCAATCTATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTCCTTTACA 106587
|| |||||||| ||||| || ||||| || |||||||| | | | ||| ||||||||
Sbjct 855 AACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTTTACT 914
Query 106588 GAATTTACAAACACGT-TTCTTTTTTCAACGTCATGCATAAAATAGAAGGGGTCTGATAG 106646
|| | ||||| ||| ||||||| |||| | ||| |||| || || | ||
Sbjct 915 GACTGCACAAAT-CGTGTTCTTTTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAG 973
Query 106647 CGTCCAACCGCCTATAGACGGAAGCACTTTTAAAT----GCGGATTTGCCAATTTAGCCG 106702
|||||| || || || || ||||| | || || | |||| ||| ||||| |
Sbjct 974 CGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGT---TTTAGT-G 1029
Query 106703 CCATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTGCG 106762
||| || || |||||||| || ||||| ||||||||||| | |||| |||||||| |
Sbjct 1030 ACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTG 1089
Query 106763 GCTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTTGC 106822
| || |||| || ||||| |||||||| || || ||||| || || | || || | |
Sbjct 1090 GTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTAC 1149
Query 106823 ATGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCCAT 106882
| || ||||| | || ||||| || || ||||||| ||| ||||| || |
Sbjct 1150 AGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTATGCCGT 1209
Query 106883 CACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGACTT 106942
|||||||||| ||||||||||| || || | ||||| | | ||| || | || |
Sbjct 1210 CACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATAC 1269
Query 106943 TATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACA 106998
||| ||||| || || | || || |||||||| || || || ||| | |||
Sbjct 1270 GATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCACA 1325
>seq117972
Length=685
Score = 127 bits (140), Expect = 2e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
|||||| || ||||| ||||| |||| || || |||||||| ||| |||||| ||
Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | || |||||| ||||||||||| | || |||||
Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| | ||||||||||| || || |||||||||||| | ||| | ||||||| ||
Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
||||||||||||||||||||| || |||||||
Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATT 61
Score = 107 bits (118), Expect = 2e-18
Identities = 164/232 (71%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613
|||||||| ||||| |||||| | || || ||||| ||||| ||| ||| | ||
Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441
Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673
|| || | | || | ||| |||||| |||||||| || | || |||||||
Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381
Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731
|| | ||||| || |||||||| |||||||||||| || | ||| | | || || |
Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTT--CTGACTACA 323
Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
|||| ||||||||||||||| |||| | ||| | | ||| |||| || ||
Sbjct 322 ACATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGAAT 271
Score = 87.8 bits (96), Expect = 2e-12
Identities = 93/121 (77%), Gaps = 4/121 (3%)
Strand=Plus/Minus
Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706
|||||||| || | ||| ||| |||||||| || || ||||| || |||||| |||||
Sbjct 635 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 576
Query 28707 GATT--CTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTAT 28764
||| | | ||||| | |||||||| |||||||| ||||||||||| || | ||||
Sbjct 575 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 518
Query 28765 T 28765
|
Sbjct 517 T 517
>seq218964
Length=932
Score = 104 bits (114), Expect = 2e-17
Identities = 165/234 (71%), Gaps = 2/234 (1%)
Strand=Plus/Plus
Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610
|||||||| || || || |||||| | ||||||||||||||||| ||| ||||||
Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696
Query 28611 TCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669
|| || || | | || | || || |||| || ||||| || || | || |||
Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 755
Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729
|||||| | | || || || || || ||||||||||| ||| | | || ||
Sbjct 756 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTA 815
Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783
||||||||||||||||||||||| ||| ||||||| | |||| || || ||
Sbjct 816 CAACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGGAAT 869
>seq153336
Length=250
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612
||||||||| |||||||||||| |||| || ||||| ||||| ||| |||| ||||
Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174
Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672
|| || | | || | ||| ||| || ||||| || || | || ||| ||
Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114
Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732
||| ||| | || || || || || ||| |||||||| || || | || |||||
Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54
Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765
||| || || ||||||||| ||||| | || ||
Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTT 21
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423731339141346
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |