Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq21365 255 5e-63 seq117972 127 2e-24 seq218964 104 2e-17 seq153336 91.5 1e-13 >seq21365 Length=2821 Score = 255 bits (282), Expect = 5e-63 Identities = 783/1196 (65%), Gaps = 27/1196 (2%) Strand=Plus/Plus Query 105818 TGTTCATGGCATTGAGTAAATCGCCGTTATCGGCATCTATTTCCCAAGCAAACAAACCGC 105877 ||||||||||||| |||| ||| ||||| ||||| || |||||||||||||| | ||| | Sbjct 142 TGTTCATGGCATTCAGTAGATCACCGTTGTCGGCGTCGATTTCCCAAGCAAAGAGACCAC 201 Query 105878 CCAGTTTGTT-TCGATCGACATATTTAACCTTGCCCAAAACAGAATCGA-CGCTATCAAA 105935 | |||||||| | || ||||||||| |||| | | ||| || || | | | ||| | Sbjct 202 CTAGTTTGTTATTTCTC-ACATATTTACCCTTTTCAATAACTGA-TCTAGCATTGTCATA 259 Query 105936 CGAAATTAAATCCNNNNNNNNNNNNNCAAAAACGTACGAAGCTTGAGCGACATTGTCA-A 105994 | | | || || || || | |||||| ||||||||||| | Sbjct 260 GGTTACAAGGTCTCCAGTTGATGGTCTGAAGACATAAGGAGCTTGGGCGACATTGTCGTA 319 Query 105995 ACG---TGTACACGTACGT-GTTCAGTTTTGTTTG-AATCTGTCGGTAATCTACGACGCC 106049 | | | ||| | | | | || ||| || | ||||| || |||||| || || || Sbjct 320 ATGAAATTCCCACTTGCCTTGAGCAATTTCATTCGCAATCTCTCTGTAATCAACCACTCC 379 Query 106050 GTCCTCCCAAGTGCCC--GACACGGGCCCGTTGCCGATTCCCGAAAAATAGTTGTTGCCA 106107 ||| | |||||| || |||| || || || || | | || | || ||||| | Sbjct 380 GTCTTGCCAAGTACCTTTGACA-GGTCCAGTAGC-GTTGCCTGTGAAGGGAATGTTGTCT 437 Query 106108 GTATAATTGGTCACGCCCGTCCACCCGCGGCCGTACATGGCAACTCCTACGATTATTTTG 106167 |||| ||||| ||||| || || || ||||||||||| |||| | || || Sbjct 438 TCGTAATCATGAACGCCAGTCCAACCACGACCATACATGGCAACACCTAATACAATCTTC 497 Query 106168 TTGGGATCGACGTCTTGTTTCAGCAACGCATCGACCGCGTAATGTGTTGTGTATTTTTCT 106227 || |||| || | ||| || ||| | || || | | | |||||| |||| Sbjct 498 TTAGGATTCACTCCCTGTGCCAACAAGTATTTTACTCCGAAGTCAGATGTGTAAGTTTCC 557 Query 106228 TCGGAATTCCAACTAGGCGCATATACCGTCGTTTGATAGCCCAGATCTGTGTTCGACCAC 106287 | || |||||| |||||| || | | ||||||| || ||| || ||||| Sbjct 558 TTGGGATTCCATGCAGGCGCGTACAATGGTGTTTGATGTCCAAGAGTATCATTTGACCAG 617 Query 106288 GCCCCTTTAAAATCGTAACTCATGAGGAAAATTTTGTCCAAATATTTTTGTGCGTCGTTA 106347 || || || || || |||||||| | |||||| | |||| ||| ||||| || | | Sbjct 618 GCTCCCTTGAAGTCATAACTCATCAAGAAAATATGATCCATATAATTTTGAGCCTTGCCG 677 Query 106348 TAGTTTACCACGGCAATTTTGTCGTAGCCCGCGCTTATAGCGCTGGTTAATTCGTAGAAT 106407 |||| || || ||||| || | || | ||| ||||| || |||||||| Sbjct 678 TAGTCAACAACTTGGATTTTATCCCATCCAGAGCTAATAGCAGAAGTCAATTCGTATTTC 737 Query 106408 TTGCCCGTTTGCAGTTCTAATTCGTCTAGCATGGCGCGCAACTCTTGCAACAGCACGACA 106467 ||||| | | | | || || ||||| | || || |||| || || ||| Sbjct 738 TTGCCATTCTTAGCTGAGAGCTCATCGAGCATCTCACGTAATTCTTTCATCAAACTTACA 797 Query 106468 TATGTTTCGGCGTCGCGTTCCGCATCGCCCAAAGAAGGATTGGCCCCTTTGCCGCCTGGA 106527 || || | || ||| | || | ||| || || ||||| || || ||| Sbjct 798 TAACAATCACCATC---TTCTGGGCTACCGAGGTCAGGGTTAGCACCTTTACCACCAGGA 854 Query 106528 AATTCCCAATCTATATCGACGCCATCAAAAAATTTCCAAACTTGCAAAAATTCCTTTACA 106587 || |||||||| ||||| || ||||| || |||||||| | | | ||| |||||||| Sbjct 855 AACTCCCAATCGATATCTACACCATCGAAGAATTTCCATGTTAGGAGAAACTCCTTTACT 914 Query 106588 GAATTTACAAACACGT-TTCTTTTTTCAACGTCATGCATAAAATAGAAGGGGTCTGATAG 106646 || | ||||| ||| ||||||| |||| | ||| |||| || || | || Sbjct 915 GACTGCACAAAT-CGTGTTCTTTTAGATTTGTCAACTAAAAAGAAGAAAGGATCGGCAAG 973 Query 106647 CGTCCAACCGCCTATAGACGGAAGCACTTTTAAAT----GCGGATTTGCCAATTTAGCCG 106702 |||||| || || || || ||||| | || || | |||| ||| ||||| | Sbjct 974 CGTCCACCCACCAATCGAGGGAAGAATCTTCAATTCAGGGCGGGCTTGT---TTTAGT-G 1029 Query 106703 CCATCAACTGTCCAAAGTTACCCTTGTAAGGCTCGTTCCAAGCGGACACGCCTTTTTGCG 106762 ||| || || |||||||| || ||||| ||||||||||| | |||| |||||||| | Sbjct 1030 ACATTAATTGGCCAAAGTTGCCTTTGTAGGGCTCGTTCCATGAAGACAATCCTTTTTGTG 1089 Query 106763 GCTTCTGTATGGCAGCCCAGGGATCGTGAATAGAAACTTTAAAATCGGCGCGCCCTTTGC 106822 | || |||| || ||||| |||||||| || || ||||| || || | || || | | Sbjct 1090 GTTTTTGTAATGCTGCCCATGGATCGTGGATTGAGACTTTGAAGTCCTCACGGCCGCTAC 1149 Query 106823 ATGATTTTTGCAAAGATTCAAAACTTCCCGGTATTGTTTTTAAGGCATCGTTTATTCCAT 106882 | || ||||| | || ||||| || || ||||||| ||| ||||| || | Sbjct 1150 AGGACCGTTGCAGTGCTTGGAAACTGCCTTCGATCTCTTTTAAGCTATCATTTATGCCGT 1209 Query 106883 CACCGCCGCAGATGGGAATAAAACCGTACAATAAATGTGATAAATTGGGCAGCGGGACTT 106942 |||||||||| ||||||||||| || || | ||||| | | ||| || | || | Sbjct 1210 CACCGCCGCAAATGGGAATAAAGCCATAGAGCAAATGAGTAAGATTAGGTATAGGTATAC 1269 Query 106943 TATCTACGGGAAAATTGCGGCCATACACGCCCCATTCGACAAAATACGCGGCGACA 106998 ||| ||||| || || | || || |||||||| || || || ||| | ||| Sbjct 1270 GATCCACGGGGAATTTCCTAGGGTAGACACCCCATTCTACGAAGTAGGCGCCCACA 1325 >seq117972 Length=685 Score = 127 bits (140), Expect = 2e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 |||||| || ||||| ||||| |||| || || |||||||| ||| |||||| || Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | || |||||| ||||||||||| | || ||||| Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| | ||||||||||| || || |||||||||||| | ||| | ||||||| || Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||||||||||||||||||||| || ||||||| Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATT 61 Score = 107 bits (118), Expect = 2e-18 Identities = 164/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||| ||||| |||||| | || || ||||| ||||| ||| ||| | || Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | || | ||| |||||| |||||||| || | || ||||||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCTAAAACTATGGCCGATTATA 28731 || | ||||| || |||||||| |||||||||||| || | ||| | | || || | Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTT--CTGACTACA 323 Query 28732 ACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 |||| ||||||||||||||| |||| | ||| | | ||| |||| || || Sbjct 322 ACATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGGAAT 271 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 28647 GACAAAGAGGGAGTGCCCGTAGATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAA 28706 |||||||| || | ||| ||| |||||||| || || ||||| || |||||| ||||| Sbjct 635 GACAAAGAAGGTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAA 576 Query 28707 GATT--CTAAAACTATGGCCGATTATAACATTCAAAAAGAATCTACTCTGCACATGGTAT 28764 ||| | | ||||| | |||||||| |||||||| ||||||||||| || | |||| Sbjct 575 GATGGCCGTACACTAT--CTGATTATAATATTCAAAAGGAATCTACTCTACATTTAGTAT 518 Query 28765 T 28765 | Sbjct 517 T 517 >seq218964 Length=932 Score = 104 bits (114), Expect = 2e-17 Identities = 165/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 28551 AAAATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCT 28610 |||||||| || || || |||||| | ||||||||||||||||| ||| |||||| Sbjct 637 AAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCT 696 Query 28611 TCAGAGACGGTGGCCGATCTCAA-GCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGA 28669 || || || | | || | || || |||| || ||||| || || | || ||| Sbjct 697 TCCGACACTATTGAAAATGTAAAAGCGAAAATTCAA-GACAAGGAAGGCATTCCTCCAGA 755 Query 28670 TCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTA 28729 |||||| | | || || || || || ||||||||||| ||| | | || || Sbjct 756 TCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTA 815 Query 28730 TAACATTCAAAAAGAATCTACTCTGCACATGGTATTAAGATTACGAGGAGGGAT 28783 ||||||||||||||||||||||| ||| ||||||| | |||| || || || Sbjct 816 CAACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGTGGTGGAAT 869 >seq153336 Length=250 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 28553 AATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTC 28612 ||||||||| |||||||||||| |||| || ||||| ||||| ||| |||| |||| Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 28613 AGAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCA 28672 || || | | || | ||| ||| || ||||| || || | || ||| || Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 28673 ACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAA 28732 ||| ||| | || || || || || ||| |||||||| || || | || ||||| Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54 Query 28733 CATTCAAAAAGAATCTACTCTGCACATGGTATT 28765 ||| || || ||||||||| ||||| | || || Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTT 21 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423731339141346