Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 196 2e-45
>seq5177
Length=4331
Score = 196 bits (216), Expect = 2e-45
Identities = 256/352 (73%), Gaps = 2/352 (1%)
Strand=Plus/Minus
Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992
|||||| | |||||| ||||| | |||||||| | ||||| |||||||||||||| ||
Sbjct 2525 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 2466
Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051
|| ||| |||||||||| ||||||||| ||||| || || | ||||| || ||||| |
Sbjct 2465 ACCTGTG-TTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGT 2407
Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111
| || ||||| ||| | ||| ||||||||||||||| ||||| ||||| | |
Sbjct 2406 AAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGT 2347
Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171
|| | ||| |||||||||| |||| ||| | |||| || || |||| | || | |
Sbjct 2346 TGTACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAG 2287
Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAG 26231
| || | |||||| || | ||| | ||| || ||||| || |||| |||||
Sbjct 2286 ACCCCTGGGCTCTAATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTA 2227
Query 26232 CTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283
|||||| | | | ||||||||||| |||| |||||||| |||||||
Sbjct 2226 ATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCAT 2175
Score = 132 bits (146), Expect = 2e-26
Identities = 352/525 (67%), Gaps = 16/525 (3%)
Strand=Plus/Minus
Query 24649 ATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAAGATA 24705
||||| |||| |||| ||||| || |||| | |||||||||| || | |||| ||
Sbjct 3775 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAG-TA 3717
Query 24706 ATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGC 24765
|||||||| ||||| || | |||||||| ||| ||||| || || |||||||| |
Sbjct 3716 GTACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCC 3657
Query 24766 AATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825
| ||| | | | | | | ||| | |||||| |||| | ||| | |||
Sbjct 3656 ATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCT 3597
Query 24826 ATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTC 24885
||| || || | | ||| ||||||| || || || | | |||||||| ||
Sbjct 3596 ATCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATC 3537
Query 24886 TTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AATA-G 24942
| |||| || | || || || |||| | ||| | |||||||| || | | |||| |
Sbjct 3536 TCTTATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 3477
Query 24943 ATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAGTGTT 25001
||| | |||||| ||| | || | | |||| ||| | | | || |
Sbjct 3476 ATT---TTTCATATCTTCATCCCATAAATCAGCTCGAGTCAA-ATCAGTCAGAAGATGAT 3421
Query 25002 TATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGT--TTGAAGTGAA 25059
|| | | | |||||||||||| |||||||||||| || ||| | |||| || ||
Sbjct 3420 GGTTCACTACAGGAAATTCTCCAGATAAAACTCTTCTT--TGGTAAATATTTGATGTAAA 3363
Query 25060 TGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGC 25119
|||||||||| ||||| | || || | ||||| | |||||| || || ||||| |||
Sbjct 3362 TGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGC 3303
Query 25120 TATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164
||| ||||| ||||| | |||||||| ||| | |||| || |||
Sbjct 3302 TATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTT 3258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 252044589192050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |