Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq5177 196 2e-45 >seq5177 Length=4331 Score = 196 bits (216), Expect = 2e-45 Identities = 256/352 (73%), Gaps = 2/352 (1%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | |||||| ||||| | |||||||| | ||||| |||||||||||||| || Sbjct 2525 CATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTT 2466 Query 25993 TCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAAT 26051 || ||| |||||||||| ||||||||| ||||| || || | ||||| || ||||| | Sbjct 2465 ACCTGTG-TTCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGT 2407 Query 26052 AGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCAT 26111 | || ||||| ||| | ||| ||||||||||||||| ||||| ||||| | | Sbjct 2406 AAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGT 2347 Query 26112 TGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGG 26171 || | ||| |||||||||| |||| ||| | |||| || || |||| | || | | Sbjct 2346 TGTACACTCTCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAG 2287 Query 26172 ATCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAG 26231 | || | |||||| || | ||| | ||| || ||||| || |||| ||||| Sbjct 2286 ACCCCTGGGCTCTAATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTA 2227 Query 26232 CTGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCAT 26283 |||||| | | | ||||||||||| |||| |||||||| ||||||| Sbjct 2226 ATGCACATTGTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCAT 2175 Score = 132 bits (146), Expect = 2e-26 Identities = 352/525 (67%), Gaps = 16/525 (3%) Strand=Plus/Minus Query 24649 ATTTT--CTTTTTCTAATGTAAATTGCTTAGCTGATACTGCTGGTTTAGTTC-TAAGATA 24705 ||||| |||| |||| ||||| || |||| | |||||||||| || | |||| || Sbjct 3775 ATTTTACCTTTGTCTACAGTAAACTGAATAGCATTTGCTGCTGGTTTTGTGCGTAAG-TA 3717 Query 24706 ATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAATGCATTGATGTTAGTTTTGC 24765 |||||||| ||||| || | |||||||| ||| ||||| || || |||||||| | Sbjct 3716 GTACATTCCTGTTTTTAAACCCATCTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCC 3657 Query 24766 AATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCTTGGCAAACAAAACGTTGTCT 24825 | ||| | | | | | | ||| | |||||| |||| | ||| | ||| Sbjct 3656 ATAGTTAGGTTTAGCAACATGTATGTTAAAAGATTGACTTTGGTCTATAAATGCTCCTCT 3597 Query 24826 ATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATCGTAAGCTGTTTTGTATCTCTC 24885 ||| || || | | ||| ||||||| || || || | | |||||||| || Sbjct 3596 ATCAGCCGCCATCTGTATGGATGTTTTCAGTGAAATCTCCCATACGGTTTTGTACAAATC 3537 Query 24886 TTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGATCCATT-TTCTCTC-AATA-G 24942 | |||| || | || || || |||| | ||| | |||||||| || | | |||| | Sbjct 3536 TCTTATTTCTTTAGGGATTTTTTCAATTTCTTGTATAGATCCATTGTTGTATATAATAAG 3477 Query 24943 ATTCAATCTCATATTCGGTGTCCAAAGATTAATTTTT-TCAAGATCTCTAATCAAGTGTT 25001 ||| | |||||| ||| | || | | |||| ||| | | | || | Sbjct 3476 ATT---TTTCATATCTTCATCCCATAAATCAGCTCGAGTCAA-ATCAGTCAGAAGATGAT 3421 Query 25002 TATTTATGATAATAAATTCTCCAGACAAAACTCTTCTTATTGATAAGT--TTGAAGTGAA 25059 || | | | |||||||||||| |||||||||||| || ||| | |||| || || Sbjct 3420 GGTTCACTACAGGAAATTCTCCAGATAAAACTCTTCTT--TGGTAAATATTTGATGTAAA 3363 Query 25060 TGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGTAGATGCTGTTGGCATTAATGC 25119 |||||||||| ||||| | || || | ||||| | |||||| || || ||||| ||| Sbjct 3362 TGGTTCAAAAGATTCAGTGTTGCCAAGAATTTGTGCAGTAGAGGCAGTCGGCATAGGTGC 3303 Query 25120 TATTAATAGCGAATTTCTCAAACCATATTTAACAATCTCTTGTTT 25164 ||| ||||| ||||| | |||||||| ||| | |||| || ||| Sbjct 3302 TATCAATAGAGAATTACGCAAACCATGTTTTGCTATCTTTTCTTT 3258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252044589192050