Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq5177 205 1e-47 >seq5177 Length=4331 Score = 205 bits (226), Expect = 1e-47 Identities = 655/1010 (65%), Gaps = 46/1010 (5%) Strand=Plus/Plus Query 75608 TACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGT 75667 ||||| || || |||||||| || || | |||||| | || ||| | ||| |||| Sbjct 2406 TACTTAGAGCCTTGGCATGCGGACATATTTGAGTTCTTAGATTTAAAAAAGAACACAGGT 2465 Query 75668 GACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATG 75727 | ||||| | |||||| || |||| | | ||||| ||||| || || ||| Sbjct 2466 AAGGAAGAAATGAGAGCTAGAGAACTGTTTTATGCTTTATGGATACCAGATCTGTTTATG 2525 Query 75728 AAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTC 75787 || |||| || ||| || | ||| ||| | ||||| | | || || ||| Sbjct 2526 AAAAGGGTAGAAAAGGATGAAGATTGGAGTCTCATGTGTCCTCATGATTGTCCTGGCCTC 2585 Query 75788 TCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAG----GG 75843 | ||| || ||||| || |||||||| || | || |||||||| || || Sbjct 2586 GCTGACTGTTACGGAGAGGAATTCGAAGCCCTATATGCCAAATATGAAGAAGAAAAACGG 2645 Query 75844 TAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGAC 75903 | | || | | | | ||| || | |||||| ||||| | || | || Sbjct 2646 TTTATAAAACGAGTCAG----AGCTCAAGAGTTATGGAAGTCTATTATAGAAGCTCAAGT 2701 Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAA 75963 ||||||||| |||||||||||| | || ||||||||||| |||| |||||||| ||||| Sbjct 2702 GGAGACTGGTACACCATATATGTTGTATAAGGATGCTTGCAACAGAAAGAGTAATCAAAA 2761 Query 75964 GAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAA 76023 ||| | || || || || | ||||||||||| || || | | ||||| | Sbjct 2762 AAATCTTGGCACTATTAAATGTAGCAATCTTTGCACTGAGGTTGTGCAATACACTTCAGA 2821 Query 76024 GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA 76083 ||||| ||| || ||||| | || || || || ||| | || ||| |||| | Sbjct 2822 AGATGAAGTGGCAGTGTGCAACCTTGCTTCCATAGCACTTAACATGTTTGT---TGAAAA 2878 Query 76084 GACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCT 76143 | ||| ||| || | ||||| | | |||||||| |||||||| || ||||| | Sbjct 2879 TAATCG---ATTTAGTTTTAAAAAATTAAAAGAAATCACTAAGATTGTGACTCAAAATTT 2935 Query 76144 AAACCGAGTCATTGACAGAAATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATAT 76200 |||| ||||||||| || |||||||| || ||| || || || ||||| Sbjct 2936 AAACAAAGTCATTGATGTTAACTTTTATCCTGTCCCTGA---AGCAAAAACTTCAAATAT 2992 Query 76201 GCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTG-TGCC 76259 | | ||| | ||||| ||| | |||||||| ||| | || ||| |||| | ||| || Sbjct 2993 GAGGCACCGTCCTATCGGTATTGGTGTTCAGGGTATGGCAGATACATTTGTGTTGATGAG 3052 Query 76260 GCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGT 76319 ||| | | || || |||| | | ||| | || |||||||| || | Sbjct 3053 AATAC-CTTACGAAAGTGAGAAAGCAATACTCCTTAATCAACAAATATTTGAAACAATTT 3111 Query 76320 ATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACAT 76379 || | | | | || || ||||||||||| || ||| ||||| | || |||| Sbjct 3112 ATTATGGTGCATTAGAAGCTAGTTGTGAATTAGCAGAAAAAGAAGGTGCATACAGCACAT 3171 Query 76380 TTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA 76439 | | || ||| || |||||| | || |||| |||||||||| ||| | Sbjct 3172 ATCAAGGAAGTCCAGCTAGCCAAGGTATCCTCCAGTATGATATGTGG--------AACAA 3223 Query 76440 AGCTCAACTAC----------GACTGGGATGTTCTCAAGGAACGCAT--CAAGGAGAAGG 76487 | ||| |||| ||||||| ||| ||||| ||| || ||| | | | Sbjct 3224 AACTC--CTACAGACCTTTGGGACTGGGCTGTCCTCAAAGAAAAGATAGCAA--AACATG 3279 Query 76488 GTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGG 76547 || | ||||| ||| ||||| ||||| ||||| || ||||| || |||||||| | | Sbjct 3280 GTTTGCGTAATTCTCTATTGATAGCACCTATGCCGACTGCCTCTACTGCACAAATTCTTG 3339 Query 76548 GTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGA 76597 | || | ||||| |||||||||| ||| |||| || |||| |||||| Sbjct 3340 GCAACACTGAATCTTTTGAACCATTTACATCAAATATTTACCAAAGAAGA 3389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594162635549120