Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq153336 149 9e-31 seq197295 125 1e-23 seq117972 125 1e-23 seq131538 111 2e-19 seq156627 95.1 2e-14 seq117971 89.7 7e-13 >seq153336 Length=250 Score = 149 bits (164), Expect = 9e-31 Identities = 127/157 (81%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 ||||||||| ||| | |||||| | ||||||||||||||||| |||||||| |||| ||| Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 ||||| || ||| || || || || ||||| || |||||||| |||||||| || Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 |||||||||||||| ||||| ||||| || |||||| Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGAT 77 >seq197295 Length=1118 Score = 125 bits (138), Expect = 1e-23 Identities = 150/202 (74%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 18413 TCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGCTT 18472 || || | ||| ||||||||||||| ||||| ||||| ||||| || ||||| | || Sbjct 745 TCCTTAGGATCCCTTATATAAGTGTCAATTAATAAAGAGTACATCTCCGAATGAACATTT 686 Query 18473 TCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTC--GCTAT 18530 |||||||| || ||||||| ||| || | || || || | ||||| ||| || | Sbjct 685 TCCATAGCAATTTGAAAACCATAGAAGCACCTGGCTTCAGTCACTTGAACCTCTTGCGAG 626 Query 18531 AAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAA 18590 ||| || | ||||| ||||||||||| ||||| |||| || || || ||||| || | Sbjct 625 AAACGCT--CCACCAAGTTCTCATTAACAATACCATCAGAAGCCGCAAAGAATGCTAAGA 568 Query 18591 CATATTTAATGAAATGTTTTTC 18612 ||| ||| || |||||||| || Sbjct 567 CATGTTTGATAAAATGTTTCTC 546 >seq117972 Length=685 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| ||| |||||||| | ||||| ||||| ||||| |||||||| |||| ||| Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| || || |||||| ||||| ||||||||||| |||||||| ||| Sbjct 440 GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAA 381 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 ||| | | |||| || || ||||| | |||||| | || | || || || || Sbjct 380 CAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAAC 321 Query 156003 ATATCCAAAGAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049 || ||||| | || | |||||||| | | |||||||| || Sbjct 320 ATCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 274 Score = 87.8 bits (96), Expect = 3e-12 Identities = 123/170 (72%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 155866 TAGAAGTCGAAGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAG 155925 |||| || ||| ||||| | |||| ||| ||||| || || ||||| ||||||| Sbjct 685 TAGAGGTAGAACCATCTGACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAG 626 Query 155926 GCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAA 155985 | || || ||||| ||||| || | |||| ||| || || || || |||||| | | | Sbjct 625 GTATTCCCCCAGACCAACAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTA 566 Query 155986 CTTTATCAGATTATAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTT 156034 | |||| ||||||||||| || ||| || | || || |||||||| || Sbjct 565 CACTATCTGATTATAATAT-TCAAAAGGAATCTACTCTACATTTAGTATT 517 >seq131538 Length=717 Score = 111 bits (122), Expect = 2e-19 Identities = 112/146 (77%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 155907 AAAATACAAGATAAAGAAGGCATACCTCCAGAACAACAAAGATTGATTTATGCCGGTAAG 155966 ||||| || || ||||||||||| |||||||| ||||| || ||||||| |||||||||| Sbjct 15 AAAATTCAGGACAAAGAAGGCATTCCTCCAGACCAACAGAGGTTGATTTTTGCCGGTAAG 74 Query 155967 CAGCTCGAAGATACCAGAACTTTATCAGATTATAATATATCCAAAGAGGCGACGCTTCAT 156026 || || |||||| |||| ||||| ||||| ||||| ||||| | || ||||| Sbjct 75 CAACTTGAAGATGGACGAACATTATCTGATTACAATATTCAGAAAGAATCTACTCTTCAC 134 Query 156027 TTAGTGTTAAGATTAAGAGGCGGTGT 156052 | || | ||| | ||||| ||||| Sbjct 135 CTTGTTCTCAGACTGAGAGGTGGTGT 160 >seq156627 Length=1589 Score = 95.1 bits (104), Expect = 2e-14 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 17864 TTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATTAAA 17923 |||| ||||||||| ||||| ||||| ||||| ||||| || ||||||||||| || | | Sbjct 462 TTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAGA 403 Query 17924 TTCATAAAATCAAATGGATT 17943 ||||||||||| |||||||| Sbjct 402 TTCATAAAATCGAATGGATT 383 >seq117971 Length=252 Score = 89.7 bits (98), Expect = 7e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| | |||||||| || ||||| || ||||| | ||||| ||| ||| Sbjct 123 ATGCAAATATTTGTGAAAACATTAACAGGAAAGACCATTACCCTGGAAGTAGAACCATCT 182 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || || ||||| ||||||||| ||||| |||||||| || ||||| ||| Sbjct 183 GACACAATCGAGAATGTGAAGGCTAAAATACAGGATAAGGAAGGCATCCCCCCAGACCAA 242 Query 155943 CA 155944 || Sbjct 243 CA 244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 728919134338400