Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq117972 183 6e-41 seq218964 127 4e-24 seq197295 127 4e-24 seq213871 116 7e-21 seq131538 105 1e-17 seq42689 95.1 2e-14 seq117971 91.5 3e-13 >seq117972 Length=685 Score = 183 bits (202), Expect = 6e-41 Identities = 179/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | |||||| ||||| ||||| | ||||| ||||| || || ||||| Sbjct 43 ATTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCG 102 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || |||| |||||||| |||||||||||||| | | ||| ||||||||| Sbjct 103 GAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGT 162 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || ||||| ||||| |||||| ||||||||| |||| ||| || | ||| Sbjct 163 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 222 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537 ||||| ||||||||||| || ||||||| ||||||| ||| ||||||||| Sbjct 223 ACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 Score = 138 bits (152), Expect = 2e-27 Identities = 145/188 (77%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365 |||||||| | |||||| ||||||||||||| ||||| | |||| || ||||||||||| Sbjct 499 ATACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGA-ATATTATAATC 557 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 ||||| ||| || |||| |||| |||||| |||||||| || | |||||||| || || Sbjct 558 AGATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGG 617 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 || || |||||||| ||||| || || || ||||| |||| || || | ||| Sbjct 618 GGGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTC 677 Query 192486 TACTTCTA 192493 ||| |||| Sbjct 678 TACCTCTA 685 >seq218964 Length=932 Score = 127 bits (140), Expect = 4e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || ||||| | ||||| ||||| | || | ||||| ||||| || || || || Sbjct 869 ATTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCT 810 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || |||||||| || ||||| || || || | |||||||| || Sbjct 809 GAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 750 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| || ||||| ||||| ||||||||| |||| || || | ||| Sbjct 749 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 690 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTT 192539 ||||| | ||||||||||||||| || | |||||| | || ||||||||||| Sbjct 689 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637 >seq197295 Length=1118 Score = 127 bits (140), Expect = 4e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 50106 ATTAATAAAGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAAT 50165 ||||||||||| ||||| || ||||| ||| ||||||||| |||||||| ||| || Sbjct 718 ATTAATAAAGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAG 659 Query 50166 TGTCTTGCTTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACA 50225 || ||||| | ||||| || |||| || || || || |||||| ||| Sbjct 658 CACCTGGCTTCAGTCACTTGAACCTCTTGCGAGAAACGCTCCACCAAGTTCTCATTAACA 599 Query 50226 ATACCATCAGATGCTGCGAAGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCT 50285 ||||||||||| || || ||||||||||| || | ||| ||||||||||| || |||| Sbjct 598 ATACCATCAGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAATGTTTCTCGCAATCT 539 Query 50286 TTTAAATTTTCCCAA 50300 ||||| | |||||| Sbjct 538 TTTAATGTCTCCCAA 524 >seq213871 Length=423 Score = 116 bits (128), Expect = 7e-21 Identities = 109/139 (78%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 49846 CCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTT 49905 |||| |||||||| |||| |||||| || ||||||||||| ||||| || |||| |||| Sbjct 354 CCTCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTT 295 Query 49906 TAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCGACACACGCAAATG 49965 | | |||||||||||| ||||| || | || || ||||| ||||| || |||||| | Sbjct 294 TCAACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAG 235 Query 49966 CTATTATTCTTGCTCCAAA 49984 | || || | | ||||||| Sbjct 234 CGATAATACGTTCTCCAAA 216 >seq131538 Length=717 Score = 105 bits (116), Expect = 1e-17 Identities = 117/155 (75%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 192298 AGTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATA 192357 ||||||| | ||||||||| || | | || | || | ||||| ||||| ||| Sbjct 167 AGTTTAA--ACACCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATA 110 Query 192358 TTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGT 192417 || |||||||||||||||||| |||| || | ||| ||||| ||||| || || |||||| Sbjct 109 TTGTAATCAGATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGT 50 Query 192418 TGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 || || || || || |||||||| || || ||||| Sbjct 49 TGGTCTGGAGGAATGCCTTCTTTGTCCTGAATTTT 15 >seq42689 Length=544 Score = 95.1 bits (104), Expect = 2e-14 Identities = 92/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Minus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || || || || ||||| ||||| ||| |||| || | |||||||||||||||| Sbjct 116 CTTTTGA-ATGTTGTAGTCAGACAATGTACGTCCATCTTCTAGCTGTTTACCAGCAAAGA 58 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACAT 192463 | || | || || || ||||| || ||||| |||||||| |||||| |||||||| Sbjct 57 TCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTTAGCTTTTACAT 1 >seq117971 Length=252 Score = 91.5 bits (100), Expect = 3e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 |||||| || || || || ||||| ||||| ||||||||| || ||||| || | Sbjct 245 CTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGT 186 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || | ||||||||| || |||||||| || || ||||||||||| | |||||| || Sbjct 185 GTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTG 126 Query 192534 CAT 192536 ||| Sbjct 125 CAT 123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980408641734900