Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq117972 168 1e-36
seq218964 145 1e-29
seq197295 122 2e-22
seq213871 113 8e-20
seq131538 104 4e-17
seq117971 96.9 6e-15
seq156627 86.0 1e-11
>seq117972
Length=685
Score = 168 bits (186), Expect = 1e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | ||| || ||||| ||||| | ||||| ||||| ||| || |||||
Sbjct 43 ATTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCG 102
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || | || |||||||| ||||||||||| || | | ||| || ||||||
Sbjct 103 GAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGT 162
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || ||||| ||||| |||||| ||||||||| |||||||| || | |||
Sbjct 163 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 222
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070
||||| ||||||||||| || ||||||| ||||||| || |||||||||
Sbjct 223 ACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273
Score = 131 bits (144), Expect = 3e-25
Identities = 141/187 (75%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|||||||| | ||| || ||||||||||||| ||||| || || ||||||||||||
Sbjct 499 ATACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCA 558
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|||| | || | || |||| |||||| ||||||||||| | ||||||||||| ||
Sbjct 559 GATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGG 618
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || |||||||| ||||| || || || ||||| ||||| || || | ||||
Sbjct 619 GGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTCT 678
Query 172020 ACTTCTA 172026
|| ||||
Sbjct 679 ACCTCTA 685
>seq218964
Length=932
Score = 145 bits (160), Expect = 1e-29
Identities = 172/233 (74%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
|| ||||| | || || ||||| | || | ||||| ||||| ||| || || |||
Sbjct 869 ATTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCT 810
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | || || |||| |||||||| || ||||| ||||| || | ||||| || ||
Sbjct 809 GAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 750
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || ||||| || ||||| ||||| ||||||||| ||||| || || | |||
Sbjct 749 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 690
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||||| | ||||||||||||||| || | |||||| | ||| |||||||||||
Sbjct 689 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637
>seq197295
Length=1118
Score = 122 bits (134), Expect = 2e-22
Identities = 139/187 (74%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475
||| ||||| || ||||| ||| ||||||||| |||||||| ||| || ||| ||
Sbjct 710 AGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGC 651
Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535
||| | ||||| || |||| || || || || |||||| |||||||||||
Sbjct 650 TTCAGTCACTTGAACCTCTTGCGAGAAACGCTCCACCAAGTTCTCATTAACAATACCATC 591
Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595
||| || || ||||||||||| |||| ||| ||||||||||| || ||||||||| |
Sbjct 590 AGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAATGTTTCTCGCAATCTTTTAATGT 531
Query 39596 TTCCCAA 39602
||||||
Sbjct 530 CTCCCAA 524
>seq213871
Length=423
Score = 113 bits (124), Expect = 8e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209
|| |||||||| |||| |||||| || ||||||||||| ||||| || |||| |||||
Sbjct 352 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTTTC 293
Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269
| |||||||||||| ||||| || | || || ||||| ||||| || |||||| ||
Sbjct 292 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGCG 233
Query 39270 ATTATTCTTGCTCCAAA 39286
|| || | | |||||||
Sbjct 232 ATAATACGTTCTCCAAA 216
>seq131538
Length=717
Score = 104 bits (114), Expect = 4e-17
Identities = 111/147 (76%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898
|| ||||||||| |||| | || | || | ||||| ||||| |||||| |||||
Sbjct 161 AACACCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATC 102
Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958
||||| | |||| | || || | ||| ||||| |||||||| || ||||||||||| ||
Sbjct 101 AGATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGG 42
Query 171959 TGGTATTCCTTCTTTATCTTGTATTTT 171985
|| || |||||||| || || |||||
Sbjct 41 AGGAATGCCTTCTTTGTCCTGAATTTT 15
>seq117971
Length=252
Score = 96.9 bits (106), Expect = 6e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||||||||| || || || ||||| ||||| ||||||||| || ||||| || ||
Sbjct 245 CTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGT 186
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
|| || | ||||||||| || |||||||| || || ||||||||||| | ||||| ||
Sbjct 185 GTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTG 126
Query 172067 CAT 172069
|||
Sbjct 125 CAT 123
>seq156627
Length=1589
Score = 86.0 bits (94), Expect = 1e-11
Identities = 67/80 (84%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
||||||||||| |||||| || || || ||||||||||| ||||| ||||| || | |
Sbjct 462 TTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAGA 403
Query 38892 TTCATAAAATCAAATGGATT 38911
||||||||||| ||||||||
Sbjct 402 TTCATAAAATCGAATGGATT 383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 901484070409200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |