Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq117972 168 1e-36 seq218964 145 1e-29 seq197295 122 2e-22 seq213871 113 8e-20 seq131538 104 4e-17 seq117971 96.9 6e-15 seq156627 86.0 1e-11 >seq117972 Length=685 Score = 168 bits (186), Expect = 1e-36 Identities = 176/231 (76%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | ||| || ||||| ||||| | ||||| ||||| ||| || ||||| Sbjct 43 ATTCCACCACGAAGACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCG 102 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || | || |||||||| ||||||||||| || | | ||| || |||||| Sbjct 103 GAAAGAGTGCGACCATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGT 162 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || || ||||| ||||| |||||| ||||||||| |||||||| || | ||| Sbjct 163 GGGATGCCCTCTTTGTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCC 222 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATT 172070 ||||| ||||||||||| || ||||||| ||||||| || ||||||||| Sbjct 223 ACTTCCAGAGTAATGGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 Score = 131 bits (144), Expect = 3e-25 Identities = 141/187 (75%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 |||||||| | ||| || ||||||||||||| ||||| || || |||||||||||| Sbjct 499 ATACCACCACGAAGACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCA 558 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 |||| | || | || |||| |||||| ||||||||||| | ||||||||||| || Sbjct 559 GATAGTGTACGGCCATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGG 618 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || |||||||| ||||| || || || ||||| ||||| || || | |||| Sbjct 619 GGAATACCTTCTTTGTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTCT 678 Query 172020 ACTTCTA 172026 || |||| Sbjct 679 ACCTCTA 685 >seq218964 Length=932 Score = 145 bits (160), Expect = 1e-29 Identities = 172/233 (74%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899 || ||||| | || || ||||| | || | ||||| ||||| ||| || || ||| Sbjct 869 ATTCCACCACGTAGACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCT 810 Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959 || | || || |||| |||||||| || ||||| ||||| || | ||||| || || Sbjct 809 GAAAGAGTGCGGCCGTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGA 750 Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019 || || ||||| || ||||| ||||| ||||||||| ||||| || || | ||| Sbjct 749 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCA 690 Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072 ||||| | ||||||||||||||| || | |||||| | ||| ||||||||||| Sbjct 689 ACTTCCAAAGTAATGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637 >seq197295 Length=1118 Score = 122 bits (134), Expect = 2e-22 Identities = 139/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 39416 AGAATACATTTCAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGCCTTGC 39475 ||| ||||| || ||||| ||| ||||||||| |||||||| ||| || ||| || Sbjct 710 AGAGTACATCTCCGAATGAACATTTTCCATAGCAATTTGAAAACCATAGAAGCACCTGGC 651 Query 39476 TTCTGAATACTGAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATC 39535 ||| | ||||| || |||| || || || || |||||| ||||||||||| Sbjct 650 TTCAGTCACTTGAACCTCTTGCGAGAAACGCTCCACCAAGTTCTCATTAACAATACCATC 591 Query 39536 AGATGCTGCGAAGAATGCTAAAACATATTTAATAAAATGTTTTTCATTATCTTTTAAATT 39595 ||| || || ||||||||||| |||| ||| ||||||||||| || ||||||||| | Sbjct 590 AGAAGCCGCAAAGAATGCTAAGACATGTTTGATAAAATGTTTCTCGCAATCTTTTAATGT 531 Query 39596 TTCCCAA 39602 |||||| Sbjct 530 CTCCCAA 524 >seq213871 Length=423 Score = 113 bits (124), Expect = 8e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 39150 TCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGCATTAATCCTCTCTTTTTA 39209 || |||||||| |||| |||||| || ||||||||||| ||||| || |||| ||||| Sbjct 352 TCATCCCTAGAAATAAGTTCATTGCTGAAAGTTAATCCGGGCATCAAGCCTCGTTTTTTC 293 Query 39210 AGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCCTCCACACACGCAAATGCT 39269 | |||||||||||| ||||| || | || || ||||| ||||| || |||||| || Sbjct 292 AACCAAAATATTGAAGCAAAGCTGCCTGAGAAAAATATTCCCTCAACCGCCGCAAAAGCG 233 Query 39270 ATTATTCTTGCTCCAAA 39286 || || | | ||||||| Sbjct 232 ATAATACGTTCTCCAAA 216 >seq131538 Length=717 Score = 104 bits (114), Expect = 4e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 171839 AATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATC 171898 || ||||||||| |||| | || | || | ||||| ||||| |||||| ||||| Sbjct 161 AACACCACCTCTCAGTCTGAGAACAAGGTGAAGAGTAGATTCTTTCTGAATATTGTAATC 102 Query 171899 TGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGG 171958 ||||| | |||| | || || | ||| ||||| |||||||| || ||||||||||| || Sbjct 101 AGATAATGTTCGTCCATCTTCAAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCTGG 42 Query 171959 TGGTATTCCTTCTTTATCTTGTATTTT 171985 || || |||||||| || || ||||| Sbjct 41 AGGAATGCCTTCTTTGTCCTGAATTTT 15 >seq117971 Length=252 Score = 96.9 bits (106), Expect = 6e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||||||||| || || || ||||| ||||| ||||||||| || ||||| || || Sbjct 245 CTGTTGGTCTGGGGGGATGCCTTCCTTATCCTGTATTTTAGCCTTCACATTCTCGATTGT 186 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 || || | ||||||||| || |||||||| || || ||||||||||| | ||||| || Sbjct 185 GTCAGATGGTTCTACTTCCAGGGTAATGGTCTTTCCTGTTAATGTTTTCACAAATATTTG 126 Query 172067 CAT 172069 ||| Sbjct 125 CAT 123 >seq156627 Length=1589 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891 ||||||||||| |||||| || || || ||||||||||| ||||| ||||| || | | Sbjct 462 TTTTGGTATTCTCCAACTTTCTTCTCAAAGAAGTTTGTTTTGCCTTCCAATGAGATGAGA 403 Query 38892 TTCATAAAATCAAATGGATT 38911 ||||||||||| |||||||| Sbjct 402 TTCATAAAATCGAATGGATT 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901484070409200