Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq148067 178 4e-39 seq5177 138 3e-27 seq54952 116 1e-20 >seq148067 Length=1860 Score = 178 bits (196), Expect = 4e-39 Identities = 346/500 (69%), Gaps = 16/500 (3%) Strand=Plus/Minus Query 288849 CCTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGC 288908 ||||||||| ||||||| | ||| ||| |||||| || || ||||||| || || Sbjct 1556 CCTATCAAATCTACCAGGTCTTAATAAGGCTTTGTCTAAAATGTCCACTCTGTTAGTAGC 1497 Query 288909 TGCCAATACAACAATAGATTCGGT-TTGC-TTAAATCCATCCATACTTGTTAAAATTTGA 288966 || ||||| |||| | || | | ||| || || |||||||| | || || |||| Sbjct 1496 AGCTAATACTACAACA--TTGGTTGTTGTGTTGAAACCATCCATTTCTACTAGAAGTTGA 1439 Query 288967 TTAAGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAA--TCACCCGAATCGCTCCttt 289024 ||||| || | ||| ||| || ||||| || || || || ||| ||| Sbjct 1438 TTAAGAGTGTTTTCTTGTTCTGAATG---ACCTCCAAAACTTCTACC---TC-CTC-TTT 1387 Query 289025 ttttACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAA 289084 || ||||||||||||| ||||| |||||||| | | ||| |||| || || | || | Sbjct 1386 TTCTACCAACAGCATCTATTTCATCAATGAATAATATACAGGGAGCATGTTTCCGAGCCA 1327 Query 289085 TTGCAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAG 289144 | | || | || || || | || | |||| ||||||| ||||||||| ||| || | Sbjct 1326 TAGAGAACATATCCCTGACTCTAGAGGGACCAACACCAACAAACATTTCTAAAAACTCTG 1267 Query 289145 AAGCGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTG 289204 || | |||||| ||||| | ||||| || || |||||| ||| | || | ||| | Sbjct 1266 AACCAGATACTGTTATGAAGGGAACATTAGCCTCTCCTGCTGTTGCTTTAGCTAAAAGAG 1207 Query 289205 TCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGC-CCCAGCA 289263 | ||||| |||||||| ||||| ||||| | |||| || || | ||| || || || Sbjct 1206 TTTTACCAGTTCCAGGGGGTCCTGTTAATAAAGCTCCTTTAGGAATTTTAGCTCCTAGGT 1147 Query 289264 GACTTATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCC 289323 | |||| | || |||| | || ||||| | ||||| |||| || |||| ||| || Sbjct 1146 CA-ATATACTGCTGAGGGTTTTTCAAAAAGTTTACAAATTCCATAATTTCAATTTTAGCT 1088 Query 289324 TCATCACATCCTGCTACATC 289343 || ||||| || || ||||| Sbjct 1087 TCCTCACAACCAGCAACATC 1068 >seq5177 Length=4331 Score = 138 bits (152), Expect = 3e-27 Identities = 623/973 (64%), Gaps = 32/973 (3%) Strand=Plus/Minus Query 155399 AAATGTGTCGGCTAAACCCTGAACTCCAATACCGACTGGGCGATGCCTGTAATTGCTCCT 155458 |||||| || || | ||||||||| |||||||||| || || ||||| ||| | Sbjct 3041 AAATGTATCTGCCATACCCTGAACACCAATACCGATAGGACGGTGCCTCATATTTGAAGT 2982 Query 155459 GCTTGTCTTCTTGTTTGGG-TAAAAATTCACATCAATAATGTTATTTAAATTTGTAACCA 155517 ||| |||| | || ||||| || |||||||| | || ||||||||| | || Sbjct 2981 TTTTG-CTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAATTTTGAGTCA 2923 Query 155518 ATACCTTGGTTACGTCTGCTAATTTCACATAGTCAAATGTTTTATCCTCATTTACAAACA 155577 | ||| || | ||| |||||| | | |||| |||| ||| ||||||| Sbjct 2922 CAATCTTAGTGATTTCTTTTAATTTTTTAAAACTAAATCGATTATTTTCA---ACAAACA 2866 Query 155578 TACCAAGACCAATAGACGCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTA 155637 | ||| | || || || || || || || || || | || |||||| | Sbjct 2865 TGTTAAGTGCTATGGAAGCAAGGTTGCACACTGCCACTTCATCTTCTGAAGTGTATTGCA 2806 Query 155638 CAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTAC 155697 ||| |||| ||| || || || || || ||||| | ||| || || ||| || | Sbjct 2805 CAACCTCAGTGCAAAGATTGCTACATTTAATAGTGCCAAGATTTTTTTGATTACTCTTTC 2746 Query 155698 TGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAA 155757 |||| ||||||||||| || | || ||||| || || ||||||| || || || | || Sbjct 2745 TGTTGCAAGCATCCTTATACAACATATATGGTGTACCAGTCTCCACTTGAGCTTCTATAA 2686 Query 155758 T---CTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCC----TTCCGAC 155810 | ||| ||| | || | || | | || ||| ||| || ||| Sbjct 2685 TAGACTT---CCATAACTCTTGAGCTCTGA----CTCGTTTTATAAACCGTTTTTCTTCT 2633 Query 155811 TCATATTT--CATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGC 155868 |||||||| |||||| || |||| | ||||| |||||||| ||| || ||||| | Sbjct 2632 TCATATTTGGCATATAGGGC-TTCGA-ATTCCTCTCCGTAACAGTCAGCGAGGCCAGGAC 2575 Query 155869 ACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTC--CATAAATAC 155926 | | || || || | || |||| || || || || || || |||||| | Sbjct 2574 AATCATGAGGACACATGAGACTCCAATCTTCAT--CCTTTTCTACCCTTTTCATAAACAG 2517 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGAT 155985 ||| ||| | |||||| || || || || || | || || | || ||| | Sbjct 2516 ATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTCTCATTTCTTCCTTACCTGTG-T 2458 Query 155986 TCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAA 156045 |||| || |||||||| || || || | ||| ||||| | || || |||| Sbjct 2457 TCTTTTTTAAATCTAAGAACTCAAATATGTCCGCATGCCAAGGCTCTAAGTAAATTGCAA 2398 Query 156046 AACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACAC 156102 | ||| | ||| ||||| ||||||||||| | ||||| || ||| | || | Sbjct 2397 ATGCACCGGGACGTTTGTTTCCACCTTGATCTACATATCTGGCAGTATTGTTGTACACTC 2338 Query 156103 CTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATG 156162 | ||| || | | |||||| ||| ||||| || || |||| || || | Sbjct 2337 TCAACATTGGCACTAGACCATTCGAAACCCCATTAGTGCCAGCTATATAAGACCCCTGGG 2278 Query 156163 AGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATT 156222 | || ||| |||||| || || ||||| | ||||||||||| || |||| Sbjct 2277 CTCTAATGCAATGTGTATGTAAACCTATGCCACCGGCAGATTTAGAAATTAATGCACATT 2218 Query 156223 CCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACG 156282 |||| ||||| ||||||||||||||| ||| |||| ||| | || || |||| | Sbjct 2217 GTTTTAAAGTATCGAAAATACCTTCAATGCTATCGTCTTTCATAGCTATAAGGAAGCAGG 2158 Query 156283 AACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAAT 156342 | | || || || ||||| |||| ||| |||||||| ||||||| |||||| Sbjct 2157 AGGAAAGCTGTGGCCGCGGTGTAGCAGCTGAGAACAGTGTAGGGCTTGCATGTGTAAAAT 2098 Query 156343 ACTTATTAGACAT 156355 | || | ||||| Sbjct 2097 ATTTCTCTGACAT 2085 >seq54952 Length=6343 Score = 116 bits (128), Expect = 1e-20 Identities = 187/269 (70%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| |||| |||||||||||| ||||||||| || |||||||| || ||| Sbjct 2013 TCCATAGCCTTTATTAGACGACGCTGAATGTAACCAGTTTCAGCAGTTTTTACCGCAGTA 1954 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCC 302694 ||||| ||||| ||||||| ||||| || ||||| | | ||| ||| | || Sbjct 1953 TCAATGAGACCTTCACGACCTCCCATGGCGTGGAAATAAAACTCAGAAGGTGTCAAGCCA 1894 Query 302695 CCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAG 302754 ||| | || | || |||||||| | | || || || ||| ||| | || Sbjct 1893 GCAAGGTATGAATTTTCGACGAAACCTCTAGATTCTGGACCATAATCGTCTTTGATGAAA 1834 Query 302755 TGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGT 302814 ||||||| || || || | | ||| | || ||||||||||| ||||||||||| || Sbjct 1833 TGTGGCAATGTTCTTTTACGAAAACCGAAAGGAATACGCTTTCCTTCAACGTTCTGTTGC 1774 Query 302815 CCCAGGCACGAAATCATCTGCGAAATATT 302843 || | || | ||| | ||| || || || Sbjct 1773 CCTACACAAGCAATAACCTGTGAGATGTT 1745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1465730836682838