Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq99455 192 5e-44 seq21365 190 2e-43 seq76853 140 3e-28 seq21831 123 2e-23 seq218964 100 2e-16 seq117972 95.1 1e-14 >seq99455 Length=547 Score = 192 bits (212), Expect = 5e-44 Identities = 135/154 (88%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 ||||||| | ||||||||||| |||| || ||||||||||||||||| |||||||||| Sbjct 272 TGGCCGGCCTGCCAAGCGCCTTAGCGACCTCTGGCATGTTGACGATGACGGTCTTGATGC 213 Query 34550 CGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGT 34609 |||| ||||| || |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 212 CGTTCCCCTTGCCCTCGACCTTGGCGCAGATGCGCGGCATCTTGTAGCGGTAGAACGCGT 153 Query 34610 CCGCCACATTGCGGTTAACGTTCACAGTCCCCAT 34643 ||||||| || | ||| ||||||| | |||||| Sbjct 152 CCGCCACGTTCCTGTTCACGTTCAAGGACCCCAT 119 >seq21365 Length=2821 Score = 190 bits (210), Expect = 2e-43 Identities = 582/890 (65%), Gaps = 15/890 (2%) Strand=Plus/Minus Query 28881 CATCTGTTATACGGCTTCGTACCTATTTGCGGCGGCGACGGGCTCAACGACGCCCTTAAA 28940 ||| || | || ||||| | || ||||||||||| ||||| | || || | | ||| Sbjct 1246 CATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAATGATAGCTTAAAA 1187 Query 28941 ACCATACCCGGTAGTTTTGAAGCGCTGCAACGTTCGTGCAACGGCCGTTCAGATTTTAAA 29000 || || ||||| |||| |||||||| || || | ||||||| || || ||| Sbjct 1186 GAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTCAAA 1127 Query 29001 GTTGCTATTCACGATCCTTGGGCCGCAATACAAAAACCGCAAAAGGGCGTGTCTGCGTGG 29060 || | || |||||||| ||||| ||| |||||||||| ||||| || ||||| | ||| Sbjct 1126 GTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGG 1067 Query 29061 AACGAGCCCTACAAAGGCAATTTCGGTCAGCTCATGGCTGCCAAGTTGGCCAATCCACAC 29120 |||||||||||||||||||| || || || | ||| | || ||| || | Sbjct 1066 AACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAA 1007 Query 29121 ATCAAAATTCTACCGTCCATAGGCGGCTGGACATTGTCCGACCCTTTTTATTTTATGCAC 29180 | || ||||| || || || || || ||||| | |||| ||||| | ||| | Sbjct 1006 TTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTT 947 Query 29181 GACGCGGAGAAACG-GCGCGTGTTTGTGGACTCGGTCGAGGAATTTTTGCAGGTGTGGAA 29239 ||| ||| | | || |||||| | || || |||| ||| | | ||||| Sbjct 946 GACAAATCTAAAAGAACACG-ATTTGTGCAGTCAGTAAAGGAGTTTCTCCTAACATGGAA 888 Query 29240 ATTTTTTGACGGCGTAGACATTGACTGGGAATTTCCGGGCGGTAAAGGCGCTAACCC-GA 29298 ||| || || || ||||| || || ||||| ||||| || |||||||| |||||||| || Sbjct 887 ATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAAAGGTGCTAACCCTGA 828 Query 29299 CACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTTTACTGAAGGAATTGCGCG 29358 | || || | | || || | || ||| | ||| |||| ||||| || | Sbjct 827 C-CTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACGTG 772 Query 29359 CAATGCTGGATAAACTGCAATTGCAAACGGGTAAAACGTATGAATTGACAAGCGCAATCA 29418 ||||| ||| | || | | | || || | || |||||||| || || | Sbjct 771 AGATGCTCGATGAGCTCTCAGCTAAGAATGGCAAGAAATACGAATTGACTTCTGCTATTA 712 Query 29419 GCTCTGGCCACGACAAAATTGCTGTAGTGAAATACGACGTTGTGCAAAAATTTCTTGATA 29478 ||||||| || ||||| || || | |||| | | ||||| | | | ||| Sbjct 711 GCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGGCTCAAAATTATATGGATC 652 Query 29479 AAATATTTCTAATGAGTTACGATTTTAAAGGCGCATGGTCAAACACCGATTTGGGATATC 29538 | || || | |||||||| || || || || || |||||||| | | ||| ||| Sbjct 651 ATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAAATGATACTCTTGGACATC 592 Query 29539 AAACTACACTCTACGCACCGAGTTGGAATCCCAACGAGCTTTACAACACTGACCACGCCG 29598 |||| || | ||||| || ||||||||||| || ||||| ||||| || | Sbjct 591 AAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAACTTACACATCTGACTTCGGAG 532 Query 29599 TAAAGTCGCTCACTAAC-CAAGGCGTGGACCCGCGCAAAATTATTGTGGGCGTCGCCATG 29657 |||| | || | | || || ||| | || || ||| | | || || |||||| Sbjct 531 TAAAAT-ACTTGTTGGCACAGGGAGTGAATCCTAAGAAGATTGTATTAGGTGTTGCCATG 473 Query 29658 TACGGCCGCGGTTGGACGGGCGTGACCGGTTACGTCGGTGACAACTAT---TTTAAAGGC 29714 || || || |||||||| ||||| | ||| || |||||| | || | |||| Sbjct 472 TATGGTCGTGGTTGGACTGGCGTTCATGATTA---CGAAGACAACATTCCCTTCACAGGC 416 Query 29715 ACAGCTGCCGGGCCCGTGACCGGCACTTGGGATGACGGAGTTGTCGACTA 29764 | ||| | || || || | || |||||| | |||||||| || || || Sbjct 415 AACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGGTTGATTA 366 >seq76853 Length=1109 Score = 140 bits (154), Expect = 3e-28 Identities = 341/515 (66%), Gaps = 29/515 (6%) Strand=Plus/Minus Query 33427 TCCTCGGCCTGCTGCAGCCAGTCCAGGAAGGGCTGCGCGCGGCGCCGCACGTCCGCCATC 33486 || ||||||||||||||||| || ||||||||||||||||| ||| ||||||| |||| | Sbjct 766 TCGTCGGCCTGCTGCAGCCACTCGAGGAAGGGCTGCGCGCGCCGCAGCACGTCGGCCACC 707 Query 33487 TCCTCGCGGCTT-AGCGC---TTTGCGGGACGGCTTGTAAAACCACTCCACGATCGCTTT 33542 |||| ||| |||| ||| || || |||||| ||| |||| | || Sbjct 706 ACCTC----CTTGGGCGCGTATTTTCGCGAGGGCTTGGCGGCCCAGTCCAGCACGGCGCG 651 Query 33543 CTTTTCCACCACGTTCAAGTCGTACAGCAGCTTGAACGCGCCGGCCACTTTGGGCAGCAG 33602 || || || | || || |||||| |||||||||| ||| ||| | ||| || || || Sbjct 650 CTCGTCAACGATGTCCAGGTCGTAGAGCAGCTTGAGGGCGGCGGGGAGTTTCGGGAGGAG 591 Query 33603 CGCCTGGTCCAAAACGCAcagcgcggtgagcgcg---------gcccgctgcgcgcgcag 33653 | | || || ||||||||||||||| || || |||||||| | Sbjct 590 GGTGGGTTCTGCGGCGGCGAGCGCGGTGAGCGCGTGCAGGGCAGCGCGGGGCGCGCGCGG 531 Query 33654 atcgccgcgcgtaaactgcagcagcagcgcgcggtacttgcgcACGTCCCCGGCGAACGC 33713 || |||| | | |||| || ||||||| ||||||||| |||| | || Sbjct 530 GTCCGCGCGGGCCAGGCGCAGGAGGGTGGCGCGGTGGCGGCGCACGTCGGCGGCAAGCGT 471 Query 33714 CGCCGGCCTCACCAGCACCTCGAACAGCACCAGCGGCGCCTTCGACTTCACCTCCAGTCG 33773 |||| || ||||||||||| || || || || || | ||| || || || Sbjct 470 GCGCGGCGCGACGAGCACCTCGAAGGCGACGAGGGGTGCGTTGGCACGCACGTCGAGGCG 411 Query 33774 TTCGGCCTCGTGCAGCAGCTCGGTGGCGATTGTAGCCTGCGAGACGTCGCAAGTGGCGTG 33833 |||||||||||||| |||| |||| | ||| || |||| ||| | Sbjct 410 CGTGGCCTCGTGCAGCACGTCGGCGGCGCTGACAGCGCCCG---CGTC------CGCGCG 360 Query 33834 CTTTTGCTTGATAAACGCATGAAACATCTTAATGCGCTGCTTTTCGTTCTTTTTTAGGTC 33893 | ||||| | |||| | ||||| | ||||||||||| |||||||| | || Sbjct 359 C---TGCTTTAGGAACGAGTAGAACATGTCCATGCGCTGCTTCTCGTTCTTCTCGCTATC 303 Query 33894 TTCATTCAGCGTCATCGACTTGACGCCCTCCGTCA 33928 || ||||||||| |||| |||||||||||| Sbjct 302 CTCGGACAGCGTCATGCTCTTGGCGCCCTCCGTCA 268 >seq21831 Length=2271 Score = 123 bits (136), Expect = 2e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 34200 TGCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTG 34259 ||| |||||||| |||||||||||||| || || ||||| ||| | | | |||||| Sbjct 684 TGCGGGCGGGTTCTTCAGTATGAAGGTATTCAGTTTATGGTTGAACTCCAAGGGGCCGTG 743 Query 34260 ATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTC 34319 || ||||| || |||||||| || |||| ||||| | || | |||||| || ||||| Sbjct 744 GTACCCGCACGCCTTGCAGCCTTGCGAGATGGTGTTCCTCTTGGTGGACACTATCAGCTC 803 Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAA 34367 ||||| || ||||| || || ||||| | ||||| |||||||| || Sbjct 804 CGTCTCGGGATTGTCGCACTCGGGACAGAGGACAAATTTGCGGATAAA 851 Score = 102 bits (112), Expect = 7e-17 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || || | ||| || || ||||| ||||||| ||| |||||| |||||||| || || Sbjct 1143 CCGTCCAACAGATCTTGCAACTTGGCGGAGTCATGGCTGCCGTTAACGATGAAGCGCTCA 1202 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGG 34484 || ||| | |||| ||||||||| ||||| |||||||| ||||||||||| || || Sbjct 1203 TTCTTGAAGTCGAACTGCGTTTGGGCGCCGAGCTCGCATCCGAAGTACTTAGTGGG 1258 >seq218964 Length=932 Score = 100 bits (110), Expect = 2e-16 Identities = 171/247 (69%), Gaps = 1/247 (0%) Strand=Plus/Plus Query 110256 TTTATAAGAGATTT-AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACC 110314 ||| | | |||| | |||||||| || || || ||||| | || || ||||||||||| Sbjct 622 TTTGTTACAGATATCAAAATGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACT 681 Query 110315 GTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAA 110374 | ||| || ||| ||| ||| | | | |||||| ||| ||| ||||| ||| Sbjct 682 TTGGAAGTTGAACCTTCCGACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAA 741 Query 110375 GGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGA 110434 ||| | || ||||||||| | | |||| || || || || |||| || | | | Sbjct 742 GGCATTCCTCCAGATCAACAACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGC 801 Query 110435 ACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGA 110494 || | | || ||||||||||||||||||||||| | ||| |||| || | || || Sbjct 802 ACTCTTTCAGACTACAACATTCAAAAAGAATCTACTCTTCACCTGGTATTGCGTCTACGT 861 Query 110495 GGGGGAA 110501 || |||| Sbjct 862 GGTGGAA 868 >seq117972 Length=685 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| ||||| |||| || || |||||||| | ||| ||| || Sbjct 273 AATGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTC 214 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | |||||| || || |||||||| ||| | || ||||| Sbjct 213 TGATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCA 154 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || | ||||| | ||| ||||| || |||| |||| | || | | |||||||| Sbjct 153 GCAGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAA 94 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||||||||||||||| | || |||| || | || || || |||| Sbjct 93 CATTCAAAAAGAATCTACTCTTCATTTGGTATTGCGTCTTCGTGGTGGAA 44 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA-GCCTGA 110331 |||||||| ||||| ||||| | || |||||||| ||||| | ||| || |||| Sbjct 500 ATGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCT 441 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | ||||| || || |||||||||||| | || ||||| Sbjct 440 -GACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCA 382 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 |||| | ||||||| ||||| || || |||| |||| | ||| | | || ||||| Sbjct 381 ACAACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAA 322 Query 110452 CATTCAAAAAGAATCTACGTTGCA 110475 ||| |||||||||||||| ||||| Sbjct 321 CATCCAAAAAGAATCTACTTTGCA 298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411217560359582