Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq2512 257 1e-63 seq21365 174 1e-38 seq153336 102 6e-17 >seq2512 Length=3386 Score = 257 bits (284), Expect = 1e-63 Identities = 376/525 (72%), Gaps = 20/525 (4%) Strand=Plus/Minus Query 103568 AACGGGTTCTTCTACTTGGGCCGCGGCGACGAAGTGCGCTGCGCGTTTTGCAAAGTGGAG 103627 ||||| |||| ||| |||||||||| || ||||| |||||||||||||| ||||| || Sbjct 1499 AACGGCTTCTATTACCTGGGCCGCGGTGATGAAGTACGCTGCGCGTTTTGTAAAGTAGAA 1440 Query 103628 ATTATGCGCTGGGAGGAGGGCGACGACCCGGCTCGCGATCATCAGAGGTGGGCGCCGCAG 103687 |||||| |||| | ||||||||| || ||| || || || |||||||||| ||| Sbjct 1439 ATTATGAAATGGGTCGCGGGCGACGATCCCGCTAAGGACCACCAACGGTGGGCGCCCCAG 1380 Query 103688 TGTCCGTTCCTGaaaa---aaaCGG-CTGCTGG-------CGCGCT-GCCCG---CCGGC 103732 || || |||||| | ||| || | || ||||| ||||| ||| Sbjct 1379 TGCCCCTTCCTGCGGCGGCAGGCGGACTCCGGGAACGTGCCGCGCGAGCCCGTGCCCGCA 1320 Query 103733 CTTGCGATGGACGGGCAGGACGAGTGCGGCGTGAGCGCGCTGCCGTCCACCAACGCCTGC 103792 | || | ||| || || || ||||| ||| |||||| ||| |||| |||| || Sbjct 1319 CCCGCACCCGTCGGCCACGATGAATGCGGAGTGCGCGCGC--CCG--CACCCGCGCCCGC 1264 Query 103793 GTGC-GCATGCCCGGCCCCGCGCACCCTCGGTTCGCCTCCGAGGCCTCAAGGTTACAAAC 103851 | | ||||||||| ||||| |||| | || | |||||| |||| | | | | | Sbjct 1263 GCCCCGCATGCCCGACCCCGTGCACGCGCGCTATGCCTCCAAGGCGGCTCGCATGCGCAG 1204 Query 103852 TTTTAAGGATTGGCCCCGGAGTCTGAAACAGAAACCGGAGAAGATGGCCGAAGCCGGATT 103911 || | || |||||||| || |||| |||||||| ||| | | ||||| || ||||| Sbjct 1203 CTTCAGCGACTGGCCCCGCAGCATGAAGCAGAAACCCGAGGAACTCGCCGAGGCGGGATT 1144 Query 103912 CTACTACACCGGCCACAGCGACAACACGAAATGCTTCTACTGCGACGGTGGTCTAAAGGA 103971 || |||||||||||| ||||||| || || ||||||||||| ||||| || || ||||| Sbjct 1143 CTTCTACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACTGTGACGGCGGGCTCAAGGA 1084 Query 103972 TTGGGAGCACGATGATGAGCCGTGGCAACAACACGCGCTTTTCTTTCGCCGTTGCGCATA 104031 |||||| |||| || | ||||||| | || ||||||| | || ||| ||||| || Sbjct 1083 CTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCTGGTTCGACCGATGCGCTTA 1024 Query 104032 CGTGCTACTTGTCAAGGGCCACGATTATGTACAAAAGGTCGTGAC 104076 ||| | || || ||||||| || |||||||| ||||| || || Sbjct 1023 CGTCCAGCTGGTAAAGGGCCGAGACTATGTACAGAAGGTGGTCAC 979 >seq21365 Length=2821 Score = 174 bits (192), Expect = 1e-38 Identities = 594/916 (65%), Gaps = 25/916 (3%) Strand=Plus/Minus Query 29145 CATCTGTTGTACGGTTTCATACCTATTTGCGGCGGCGACGGGCTCAACGACGCCCTCAAA 29204 ||| || | || || || || || ||||||||||| ||||| | || || | | ||| Sbjct 1246 CATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGGCATAAATGATAGCTTAAAA 1187 Query 29205 ACCATTCCCGGCAGTTTTGAGGCGCTGCAACGCTCTTGCAAGGGCCGTTCAGATTTCAAA 29264 || |||||||| | || |||||||| || || | |||||| || |||||| Sbjct 1186 GAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTAGCGGCCGTGAGGACTTCAAA 1127 Query 29265 GTCGCTATTCACGATCCGTGGGCCGCGATACAAAAACCGCAAAAGGGCGTGTCTGCGTGG 29324 ||| | || |||||||| ||||| || |||||||||| ||||| || ||||| | ||| Sbjct 1126 GTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCACAAAAAGGATTGTCTTCATGG 1067 Query 29325 AACGAGCCCTACAAAGGAAACTTCGGTCAGCTAATGGCGGCCAAGCTGGCCAATCCGCAC 29384 ||||||||||||||||| ||||| || || ||||| | || | ||| || | Sbjct 1066 AACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCACTAAAACAAGCCCGCCCTGAA 1007 Query 29385 CTCAAAATTCTGCCGTCCATCGGCGGCTGGACATTGTCCGACCC---GTTCTATTTCATG 29441 | || ||||| || || || || || ||||| | |||| || |||| ||| | Sbjct 1006 TTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCGATCCTTTCTTCTTTTTAGTT 947 Query 29442 CACGACGCGGAAAAACGGCGTGTGTTTGTGGACTCGGTCAGAGAATTTCTGCAGGTGTGG 29501 || | | ||| | || |||||| | || || | || ||||| | ||| Sbjct 946 GACAAATCTAAAAGAACACG---ATTTGTGCAGTCAGTAAAGGAGTTTCTCCTAACATGG 890 Query 29502 AAGTTTTTTGACGGCGTGGACATAGACTGGGAGTTTCCGGGTGGCAAAGGCGCCAACCC- 29560 || || || || || || || || || ||||||||||| ||||| ||||| || ||||| Sbjct 889 AAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCTGGTGGTAAAGGTGCTAACCCT 830 Query 29561 GACACTTGGCAACGGGGAGCGCGACGCCGACACGTATAACATTTTACTAAAGGAATTGCG 29620 ||| || || | | || || | || ||| | ||| | || ||||| || Sbjct 829 GAC-CTCGGTAGCCCAGA---AGATGGTGATTGTTATGTAAGTTTGATGAAAGAATTACG 774 Query 29621 CGCAATGATGGACGAGTTACAATTGCAAACGGGCAAAACGTACGAGTTGACAAGCGCAAT 29680 | ||| | || ||| | | | | ||||| | ||||| ||||| || || Sbjct 773 TGAGATGCTCGATGAGCTCTCAGCTAAGAATGGCAAGAAATACGAATTGACTTCTGCTAT 714 Query 29681 CAGTTCCGGACATGACAAGATTGCTGTAGTTAAATACGACGCTGCGCAAAAGTTTCTCGA 29740 || || ||| || || || || ||| | |||| | || ||||| | | | || Sbjct 713 TAGCTCTGGATGGGATAAAATCCAAGTTGTTGACTACGGCAAGGCTCAAAATTATATGGA 654 Query 29741 TAAAATATTCCTCATGAGCTACGATTTTAAAGGCGCGTGGTCAAACACCGAT----TTGG 29796 | | || ||| | ||||| || || || || || || |||||||| ||| |||| Sbjct 653 TCATATTTTCTTGATGAGTTATGACTTCAAGGGAGCCTGGTCAAA---TGATACTCTTGG 597 Query 29797 GCTACCAAACTACTCTCTACGCGCCGAGTTGGAACCCAAACGAACTGTACAACACGGACC 29856 | | ||||| | | |||||||| ||||| || || ||| |||| | ||| Sbjct 596 AC-ATCAAACACCATTGTACGCGCCTGCATGGAATCCCAAGGAAACTTACACATCTGACT 538 Query 29857 ACGCCGTTAAGTTGCTCACGAACCAGGGCGTGGACCCGCGCAAAATTATTGTGGGCGTCG 29916 || || || | | | ||||| ||| | || || ||| | | || || | Sbjct 537 TCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATCCTAAGAAGATTGTATTAGGTGTTG 478 Query 29917 CCATGTACGGCCGCGGTTGGACAGGCGTGTCGGGTTATGACGGTGACAACTAT---TTTA 29973 ||||||| || || |||||||| ||||| || | || ||| |||||| | || | Sbjct 477 CCATGTATGGTCGTGGTTGGACTGGCGT-TC--ATGATTACGAAGACAACATTCCCTTCA 421 Query 29974 CGGGCACAGCTGCTGGGCCCGTGACCGGCACTTGGGAAGACGGCGTTGTCGACTATCGCC 30033 | |||| ||| |||| || || | || |||||| ||||||| || || || || | Sbjct 420 CAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAGACGGAGTGGTTGATTACAGAG 361 Query 30034 AAATTGAAAACGAAAT 30049 | |||| || ||||| Sbjct 360 AGATTGCGAATGAAAT 345 >seq153336 Length=250 Score = 102 bits (112), Expect = 6e-17 Identities = 151/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 ||||||||||||||| ||||| |||| || ||||| ||||| | ||| ||| ||| Sbjct 233 AATGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTC 174 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||||| ||| | || || ||||||| || || |||||| | || || || Sbjct 173 TGATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCA 114 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 || ||| | |||| || || || || ||||| || | ||| || ||||||| || Sbjct 113 ACAAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAA 54 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTG 107768 ||| || ||||| ||||| |||||| | |||||| Sbjct 53 CATCCAGAAGGAATCTACTTTGCACTTAGTGTTG 20 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397307695203286