Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq117972 141 1e-28
seq218964 120 5e-22
seq153336 111 2e-19
>seq117972
Length=685
Score = 141 bits (156), Expect = 1e-28
Identities = 167/226 (74%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || | |||||| | || || |||||||||||| | || || ||| |
Sbjct 499 TGCAAATTTTTGTTAAAACACTTACTGGCAAAACAATTACTTTAGAAGTTGAAGCCTCTG 440
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| || ||| |||||||||| |||||| ||| |||||||||||||| || |||||||
Sbjct 439 ACACAATTGAAAATGTAAAGGCTAAAATCCAAGACAAAGAAGGCATTCCTCCAGATCAAC 380
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | || ||||| || || || ||||| || ||| | | || | | || || || |
Sbjct 379 AACGTCTTATTTTCGCGGGCAAGCAATTGGAAGATGGTCGTACACTTTCTGACTACAACA 320
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| ||||||||||| ||| | ||||||||| | || |||||||| ||
Sbjct 319 TCCAAAAAGAATCTACTTTGCATTTAGTACTTCGTTTAAGAGGTGG 274
Score = 134 bits (148), Expect = 2e-26
Identities = 158/214 (74%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || || | ||||| |||| ||||| || |||||| | || || |||| |
Sbjct 271 TGCAGATTTTTGTTAAAACCCTAACTGGAAAGACCATTACTCTGGAAGTGGAACCCTCTG 212
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||||||| ||||||||||| |||||| ||| ||||| ||||| ||||| ||||| |
Sbjct 211 ATACTATTGAAAATGTAAAAGCTAAAATCCAAGACAAAGAGGGCATCCCACCTGATCAGC 152
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
| | || || ||||| ||||| ||||| || ||| | | || | | ||||| || |
Sbjct 151 AGCGCCTTATCTTTGCTGGTAAGCAATTGGAAGATGGTCGCACTCTTTCCGATTACAACA 92
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| ||||||||||| ||| | ||||| ||||| ||
Sbjct 91 TTCAAAAAGAATCTACTCTTCATTTGGTATTGCG 58
Score = 109 bits (120), Expect = 9e-19
Identities = 117/155 (75%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
|| |||||| ||||||| || || || ||| |||||||| ||||| || || |||
Sbjct 668 GACACTATTGAAAATGTGAAGGCAAAGATCCAAGACAAAGAAGGTATTCCCCCAGACCAA 609
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
|| || ||||||||||| || |||||| | || ||| | || || | |||||||||
Sbjct 608 CAGAGGCTCATTTTTGCTGGAAAACAACTGGAAGATGGCCGTACACTATCTGATTATAAT 549
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
|| ||||| ||||| ||| | ||||||||||| ||
Sbjct 548 ATTCAAAAGGAATCTACTCTACATTTAGTATTGCG 514
>seq218964
Length=932
Score = 120 bits (132), Expect = 5e-22
Identities = 155/214 (72%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
|||| || ||| | |||||| | || || ||||| |||||| | || || |||| | ||
Sbjct 641 TGCAGATTTTCGTGAAAACACTCACGGGTAAAACCATTACTTTGGAAGTTGAACCTTCCG 700
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
| |||||| ||||||||||| ||||| ||| || ||||||||||| || |||||||
Sbjct 701 ACACTATTGAAAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 760
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
|| | | ||||| || || || ||||| || || | || | |||| || || |
Sbjct 761 AACGTTTGATTTTCGCTGGAAAGCAATTGGAAGACGGCCGCACTCTTTCAGACTACAACA 820
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245
| ||||||||||| ||| | || | ||||| ||
Sbjct 821 TTCAAAAAGAATCTACTCTTCACCTGGTATTGCG 854
>seq153336
Length=250
Score = 111 bits (122), Expect = 2e-19
Identities = 160/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091
||||||| || |||||||| |||| |||||||| |||||| | || || ||| | |
Sbjct 231 TGCAAATTTTTGTAAAAACACTAACTGGAAAAACTATTACTTTAGAAGTGGAAGCTTCTG 172
Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151
|||| || ||||||| || || || ||| || ||||||||||| || || ||||
Sbjct 171 ATACAATCGAAAATGTTAAGGCAAAGATTCAAGACAAGGAAGGCATTCCTCCAGACCAAC 112
Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211
||||| | ||||| || || || ||| | || ||| | || | | || ||||| |
Sbjct 111 AAAGATTGATTTTCGCCGGAAAGCAACTGGAAGATGGGCGCACACTGTCGGACTATAACA 52
Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257
| || || ||||| ||| | || ||||| || || |||| || ||
Sbjct 51 TCCAGAAGGAATCTACTTTGCACTTAGTGTTGCGTCTAAGGGGTGG 6
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 782994474080080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |