Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq21365 250 2e-61 seq117972 179 3e-40 seq218964 147 2e-30 seq153336 147 2e-30 seq2512 89.7 4e-13 seq42689 82.4 6e-11 >seq21365 Length=2821 Score = 250 bits (276), Expect = 2e-61 Identities = 648/976 (66%), Gaps = 29/976 (3%) Strand=Plus/Minus Query 45105 TGTCGCCGCTTATTTCGTTGAATGGGGAGTGTATGGGCGCAATTTTCCTATGAACCGCGT 45164 ||| | ||| || ||||| |||||||| || || | || || || || | || | Sbjct 1325 TGTGGGCGCCTACTTCGTAGAATGGGGTGTCTACCCTAGGAAATTCCCCGTGGATCGTAT 1266 Query 45165 GCCAGTGCCGAACCTTACGCATTTGTTATACGGTTTTATTCCTATATGCGGTGGCGATGG 45224 || | || || ||||| |||||| | || || |||||||| || ||||| || || || Sbjct 1265 ACCTATACCTAATCTTACTCATTTGCTCTATGGCTTTATTCCCATTTGCGGCGGTGACGG 1206 Query 45225 CATTAATGACAGTCTTAAAAC-GATTACAGGCAGTTTTGAAGCGTTGCAAAAATCGTGCG 45283 ||| ||||| || ||||||| ||| ||||||||| |||| ||||| || || Sbjct 1205 CATAAATGATAG-CTTAAAAGAGATCGAAGGCAGTTTCCAAGCACTGCAACGGTCCTGTA 1147 Query 45284 CCGGCCGCTCAGATTTCAAAGTGAGCATTCACGACCCATGGGCCGCTGTGCAAAAACCAC 45343 |||||| || |||||||| || ||||| |||||||| || | |||||||||| Sbjct 1146 GCGGCCGTGAGGACTTCAAAGTCTCAATCCACGATCCATGGGCAGCATTACAAAAACCAC 1087 Query 45344 AAAAAGGCGTTTCTGCTTGGAACGAACCGTATAAAGGCAATTTTGGACAAATCATGGCTG 45403 ||||||| | ||| | |||||||| || || |||||||| ||||| ||| | ||| | Sbjct 1086 AAAAAGGATTGTCTTCATGGAACGAGCCCTACAAAGGCAACTTTGGCCAATTAATGTCAC 1027 Query 45404 TAAAACGGGCAAATCCTCATTTAAAAGTGTTGCCATCGATTGGCGGCTGGACGCTGTCCG 45463 |||||| || ||| | || || | | || |||||||| || |||||||| ||| Sbjct 1026 TAAAACAAGCCCGCCCTGAATTGAAGATTCTTCCCTCGATTGGTGGGTGGACGCTTGCCG 967 Query 45464 ATCCGTTTTACCATT---TGCACGATGCGGAGA-AACGCGCTTTGTTTGTGGAATCCGTG 45519 |||| || | | || | || | | | | ||| || |||||| | || || Sbjct 966 ATCCTTTCTTCTTTTTAGTTGACAAATCTAAAAGAACACG----ATTTGTGCAGTCAGTA 911 Query 45520 CGCGAATTTTTAACTACGTGGAAATTTTTTGACGGAGTCGATATAGATTGGGAGTTTCCC 45579 || ||| | || |||||||| || || || || ||||| |||||||||||||| Sbjct 910 AAGGAGTTTCTCCTAACATGGAAATTCTTCGATGGTGTAGATATCGATTGGGAGTTTCCT 851 Query 45580 GGCGGCAATGGCGCCAATC----CATCGGTGGGCGATCCAGAACGCGACGGTCTCACTTA 45635 || || || || || || | | ||||| | |||||| || ||| ||| Sbjct 850 GGTGGTAAAGGTGCTAACCCTGACCTCGGTAG----CCCAGAA---GATGGTGATTGTTA 798 Query 45636 TGTAGCACTGCTGCGCGATTTGCGCGACATGCTCGATCAATTGGCGCA-CGAA-ACCGGT 45693 |||| || || || || || || ||||||||| | | | || | || | || Sbjct 797 TGTAAGTTTGATGAAAGAATTACGTGAGATGCTCGATGAGCT--CTCAGCTAAGAATGGC 740 Query 45694 CGGCGCTACGAACTGACTACGGCTATAAGCGCCGGTGACGACAAAATCGCTTTGGTAGAT 45753 | |||||| ||||| | ||||| ||| | || || |||||| | || || Sbjct 739 AAGAAATACGAATTGACTTCTGCTATTAGCTCTGGATGGGATAAAATCCAAGTTGTTGAC 680 Query 45754 TA--TCAAGACGCGCAAACTTATCTCGATCGAATCTTTTTAATGACGTATGATTTTAAAG 45811 || |||| || |||| |||| | |||| || || || |||| ||||| || || | Sbjct 679 TACGGCAAG--GCTCAAAATTATATGGATCATATTTTCTTGATGAGTTATGACTTCAAGG 622 Query 45812 GCGCTTGGTCGAACTCGGATTTGGGCCATCAAACGGCCGTGTACGCGCCAGAATGGAATC 45871 | || ||||| || | | || |||||||| | |||||||||| | |||||||| Sbjct 621 GAGCCTGGTCAAATGATACTCTTGGACATCAAACACCATTGTACGCGCCTGCATGGAATC 562 Query 45872 GCGACGAGCGTTACACAGTCGACTACGCGGTGCACGTTTTGCTCGAAAAACGGGTAAAGC 45931 | | || ||||||| |||| || || | ||| | | | | | || || | Sbjct 561 CCAAGGAAACTTACACATCTGACTTCGGAGTAAAATACTTGTTGGCACAGGGAGTGAATC 502 Query 45932 CTCAAAAAATCGTGCTCGGCGTGGCAATGTACGGTCGCGGCTGGACCGGAGTAATTAACT 45991 || | || || || | || || || ||||| ||||| || ||||| || || | | | Sbjct 501 CTAAGAAGATTGTATTAGGTGTTGCCATGTATGGTCGTGGTTGGACTGGCGTTCATGATT 442 Query 45992 ATCAAGACGACAACCCGTTTACCGGCATCGCAACCGGGCCCGTGTCCGGCACTTGGGAAG 46051 | ||||| ||| || || || |||| ||| || || || || || |||||| ||| Sbjct 441 ACGAAGACAACATTCCCTTCACAGGCAACGCTACTGGACCTGTCAAAGGTACTTGGCAAG 382 Query 46052 ACGGTGTGATCGATTA 46067 |||| ||| | ||||| Sbjct 381 ACGGAGTGGTTGATTA 366 >seq117972 Length=685 Score = 179 bits (198), Expect = 3e-40 Identities = 170/217 (78%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| ||||||||||| || ||||||||||||||||| ||||| | || |||||| Sbjct 57 ACGCAATACCAAATGAAGAGTAGATTCTTTTTGAATGTTGTAATCGGAAAGAGTGCGACC 116 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | ||| || |||||| | || | | |||||||| || || || |||||||| Sbjct 117 ATCTTCCAATTGCTTACCAGCAAAGATAAGGCGCTGCTGATCAGGTGGGATGCCCTCTTT 176 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||| ||| |||| | ||| ||||| |||| ||||| ||||| || Sbjct 177 GTCTTGGATTTTAGCTTTTACATTTTCAATAGTATCAGAGGGTTCCACTTCCAGAGTAAT 236 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || ||||||| |||||||||||| ||||||||| Sbjct 237 GGTCTTTCCAGTTAGGGTTTTAACAAAAATCTGCATT 273 Score = 136 bits (150), Expect = 3e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || || ||||| || || ||||| | || ||||||||||| ||||| || || | Sbjct 273 TCCACCTCTTAAACGAAGTACTAAATGCAAAGTAGATTCTTTTTGGATGTTGTAGTCAGA 332 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || ||| ||| || | ||| ||||| || | || | | ||| ||||| || || Sbjct 333 AAGTGTACGACCATCTTCCAATTGCTTGCCCGCGAAAATAAGACGTTGTTGATCTGGAGG 392 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || ||||||||||| | ||| || ||| |||| | |||||||| ||| || Sbjct 393 AATGCCTTCTTTGTCTTGGATTTTAGCCTTTACATTTTCAATTGTGTCAGAGGCTTCAAC 452 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| | ||| || ||||||||||| | ||||||||||| || ||||| Sbjct 453 TTCTAAAGTAATTGTTTTGCCAGTAAGTGTTTTAACAAAAATTTGCAT 500 Score = 111 bits (122), Expect = 1e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| || ||||| || || ||||| |||||||| |||||||| | | || || Sbjct 513 ACGCAATACTAAATGTAGAGTAGATTCCTTTTGAATATTATAATCAGATAGTGTACGGCC 572 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| |||||| | || | || || || || || |||||||| ||||| Sbjct 573 ATCTTCCAGTTGTTTTCCAGCAAAAATGAGCCTCTGTTGGTCTGGGGGAATACCTTCTTT 632 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTC 29741 |||||| | ||| || ||| |||| | ||||||||| ||||||| || Sbjct 633 GTCTTGGATCTTTGCCTTCACATTTTCAATAGTGTCAGATGGTTCTACCTC 683 >seq218964 Length=932 Score = 147 bits (162), Expect = 2e-30 Identities = 166/220 (75%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||| ||||| || ||||||||||||||||| || || | || ||||| Sbjct 855 ACGCAATACCAGGTGAAGAGTAGATTCTTTTTGAATGTTGTAGTCTGAAAGAGTGCGGCC 796 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | ||| || ||||| | ||||| | ||| ||||| || ||||| || || || Sbjct 795 GTCTTCCAATTGCTTTCCAGCGAAAATCAAACGTTGTTGATCTGGAGGAATGCCTTCCTT 736 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | ||| ||| |||| | |||||| ||| |||| ||||| | ||| | Sbjct 735 GTCTTG-AATTTTCGCTTTTACATTTTCAATAGTGTCGGAAGGTTCAACTTCCAAAGTAA 677 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | ||||| || || | ||||| || || ||||||||||| Sbjct 676 TGGTTTTACCCGTGAGTGTTTTCACGAAAATCTGCATTTT 637 >seq153336 Length=250 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| ||||| | ||||| ||| || || | || ||||| || || |||||||| |||| Sbjct 5 TCCACCCCTTAGACGCAACACTAAGTGCAAAGTAGATTCCTTCTGGATGTTATAGTCCGA 64 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | ||||| ||| || ||||| || || || | ||||||||||| || || || || Sbjct 65 CAGTGTGCGCCCATCTTCCAGTTGCTTTCCGGCGAAAATCAATCTTTGTTGGTCTGGAGG 124 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| || || |||||||| ||| |||| || ||| |||| | || |||||| ||| | Sbjct 125 AATGCCTTCCTTGTCTTG-AATCTTTGCCTTAACATTTTCGATTGTATCAGAAGCTTCCA 183 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | ||| |||||||| ||||||| ||||| ||||| || |||||| Sbjct 184 CTTCTAAAGTAATAGTTTTTCCAGTTAGTGTTTTTACAAAAATTTGCATT 233 >seq2512 Length=3386 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/238 (68%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 89703 CGGCTCGGTTGCGCACTTTTGAACGCAACTGGCCTTGCGCTTTGAAACAAAAACCTGAGC 89762 ||||||| |||||| || || ||||||| || |||| || ||||| ||| Sbjct 1219 CGGCTCGCATGCGCAGCTTCA---GCGACTGGCCCCGCAGCATGAAGCAGAAACCCGAGG 1163 Query 89763 AGTTGGCGGATGCCGGttttttttACACGGGCCAAGGCGACAAGACGATTTGTTTCTTTT 89822 | | || || || || || || ||||| ||||| |||||||| || | || |||| | Sbjct 1162 AACTCGCCGAGGCGGGATTCTTCTACACCGGCCAGGGCGACAAAACTAAGTGCTTCTACT 1103 Query 89823 GCAACGGGGGCCTTAAGGATTGGGAAGATGGCGATGAACCTTGGGAACAACATGCGCGCT 89882 | |||| || || ||||| ||||| | | ||| | || ||||| || || ||||||| Sbjct 1102 GTGACGGCGGGCTCAAGGACTGGGAGAACGACGACGTGCCGTGGGAGCAGCACGCGCGCT 1043 Query 89883 GGTTTGATAATTGCATCTATGTTCAACTAGTAAAAGGACGCGATTACGTGCAAAATGT 89940 |||| || ||| || || || || ||||| || || || || || || || || Sbjct 1042 GGTTCGACCGATGCGCTTACGTCCAGCTGGTAAAGGGCCGAGACTATGTACAGAAGGT 985 >seq42689 Length=544 Score = 82.4 bits (90), Expect = 6e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 29590 GTGGATTCTTTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATCGAGTTGTTTGCC 29648 |||||||| ||||||||||| || || | |||| || || ||| || || ||||| || Sbjct 124 GTGGATTCCTTTTGAATGTTGTAGTCAGACAAT-GTACGTCCATCTTCTAGCTGTTTACC 66 Query 29649 AGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 |||| | ||||| | |||||| || || |||||||| || || ||||| | ||| Sbjct 65 AGCAAAGATCAAACGTTGCTGGTCTGGTGGAATACCTTCCTTATCTTGGATTTT 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383703821581134