Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25]
322,774 sequences; 210,868,349 total letters
Query= NC_023611.1
Length=198533
Score E
Sequences producing significant alignments: (Bits) Value
seq39946 98.7 1e-15
seq191159 82.4 1e-10
seq54952 82.4 1e-10
>seq39946
Length=3916
Score = 98.7 bits (108), Expect = 1e-15
Identities = 173/245 (71%), Gaps = 13/245 (5%)
Strand=Plus/Plus
Query 192954 TATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGATT 193011
|||||||| |||||||| || || ||| ||| | || || ||||| | ||||| || |
Sbjct 2330 TATCCACACAAACCCCTGGTCACAACAAGATCTATGGAATATTTACGAT-TTAGA-GAGT 2387
Query 193012 ATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGAAG 193071
|| |||||| ||| |||||||||| || || || ||||| || ||||||||||
Sbjct 2388 TGCCTGCTGGTATCAATTCTATTGTTGCAATTTTATGTTACACTGGATACAATCAAGAAG 2447
Query 193072 ACAGTATTATTTTAAATAAAGCTT---CTATTGAAAGAGGATTATTTGGTACTATAACTT 193128
| ||| | ||||||||| |||| || ||||||||||||| ||| | | || ||
Sbjct 2448 ATAGTGTCATTTTAAAT---GCTTCAGCTGTTGAAAGAGGATTCTTTAGATCAGTATTTT 2504
Query 193129 ATAATACATATACAGTTGAAGAAACAAA---AAATGGAATTATAGAAGAAAAAATAGATA 193185
| | | |||| || | |||| |||| || |||| | ||||||| || | || |
Sbjct 2505 ACCGTTCTTATAAAGATTCAGAATCAAAAAGAATTGGAGATCAAGAAGAACAATTTGAAA 2564
Query 193186 TACCT 193190
||||
Sbjct 2565 AACCT 2569
>seq191159
Length=871
Score = 82.4 bits (90), Expect = 1e-10
Identities = 91/119 (76%), Gaps = 2/119 (2%)
Strand=Plus/Plus
Query 168653 AGGTGATTTAGGTCCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGA 168712
||||||| | ||||| ||||||| ||||||||||||||| |||||| ||||| ||||
Sbjct 293 AGGTGATCTTGGTCCTGTTTATGGCTTTCAATGGAGACATAGTGGAGCTAAATATGTTGA 352
Query 168713 CTGTG-ATACAGATTACACCGGACAAGGAGTAGACCAATTAAGTCAAACTATAAATACT 168770
|| | | || |||| | ||||||||| | || ||| || | | | ||||||||||
Sbjct 353 -TGCGAAAACCAATTATGCAGGACAAGGAATTGATCAAATACATAACATTATAAATACT 410
>seq54952
Length=6343
Score = 82.4 bits (90), Expect = 1e-10
Identities = 73/90 (81%), Gaps = 1/90 (1%)
Strand=Plus/Plus
Query 51957 ACATTTAAAATGAATTTGGCTATGACTAAAGCATATAATGCTGATTTTGATGGGGATGAA 52016
|||||| ||||||||| | ||| ||||||||||||| |||||||| || |||
Sbjct 848 ACATTTCGTATGAATTTGAGTTGCACTTCGCCATATAATGCTGACTTTGATGGCGACGAA 907
Query 52017 ATGAATTTACATGTTCCTCAATCATATGGA 52046
|||||||||||||| |||||||| ||||||
Sbjct 908 ATGAATTTACATGTACCTCAATC-TATGGA 936
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632614864816720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |