Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq39946 96.9 5e-15 >seq39946 Length=3916 Score = 96.9 bits (106), Expect = 5e-15 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 201146 TGGTATTAATGCAATTGTAGCAATTGCATGTTACACTGGATACAATCAAGAAGATAGTGT 201205 |||||| ||| | ||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 2395 TGGTATCAATTCTATTGTTGCAATTTTATGTTACACTGGATACAATCAAGAAGATAGTGT 2454 Query 201206 TATTCTTAATAAAGCATCTATTGAAAGAGGTTTATT 201241 ||| | ||| || || |||||||||| || || Sbjct 2455 CATTTTAAATGCTTCAGCTGTTGAAAGAGGATTCTT 2490 Score = 82.4 bits (90), Expect = 1e-10 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Plus Query 201567 CGTATACCAGAAATTGGAGATAAATTTTGTTCTGGA-ATGGCCCAAAAAGGAACTTGTGG 201625 ||||| ||| ||||||| ||||| ||| |||| | |||| | |||||||||| ||||| Sbjct 2852 CGTATTCCACAAATTGGGGATAAGTTTGCTTCTCGTCATGGTC-AAAAAGGAACATGTGG 2910 Query 201626 TATGATTTATGCACAAGAAGATATGCCGTTTACACAATCGGGTATGACCCCGGATATTAT 201685 || ||| |||||||||||||||||||||| ||| | || || ||||| || Sbjct 2911 AATCCAATATCGACAAGAAGATATGCCGTTTACATGTGAGGGCTTAACGCCAGATATCAT 2970 Query 201686 AATCAATCC 201694 || ||||| Sbjct 2971 TATTAATCC 2979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652636158166000