Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq39946 91.5 2e-13 >seq39946 Length=3916 Score = 91.5 bits (100), Expect = 2e-13 Identities = 219/322 (68%), Gaps = 16/322 (5%) Strand=Plus/Plus Query 192433 CTATGGTTAAACAAGCCATTGG-GTTTA--TTCCTTGCCACAACTTAAAAACGGAAACAG 192489 |||||| ||||||||| || || || || || || | | | | | || ||| ||| Sbjct 2253 CTATGGGTAAACAAGCTATGGGTGTCTACATTACTAACTTCCATGTTAGAATGGATACAT 2312 Query 192490 TCTCTCATACATTAAATTATCCACAAAAACCACTTGTTACCACA-GATAT-TGCAAAATT 192547 | | ||| | | | |||||||| ||||| || || || ||| ||| | || || ||| Sbjct 2313 TGGCCCATGTACTCTACTATCCACACAAACCCCTGGTCACAACAAGATCTATGGAATATT 2372 Query 192548 TAATAAATTAGACGATTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATAC 192607 || | ||||| || | || |||||| ||| |||||||||| || || || || Sbjct 2373 TACGAT-TTAGA-GAGTTGCCTGCTGGTATCAATTCTATTGTTGCAATTTTATGTTACAC 2430 Query 192608 TGGCTATAACCAAGAAGACAGTATTATTTTAAATAAAGCTTC---TATTGAAAGAGGATT 192664 ||| || || |||||||| ||| | ||||||||| ||||| | ||||||||||||| Sbjct 2431 TGGATACAATCAAGAAGATAGTGTCATTTTAAAT---GCTTCAGCTGTTGAAAGAGGATT 2487 Query 192665 ATTTGGCACTATAACTTATAATACATATACAGTTGAAGAAACAAA---AAATGGAATTAT 192721 ||| | | || ||| | | |||| || | |||| |||| || |||| | Sbjct 2488 CTTTAGATCAGTATTTTACCGTTCTTATAAAGATTCAGAATCAAAAAGAATTGGAGATCA 2547 Query 192722 AGAAGAAAAAATAGATATACCT 192743 ||||||| || | || | |||| Sbjct 2548 AGAAGAACAATTTGAAAAACCT 2569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625995280880640