Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Heliconius_20hierax_20[genbank_20GCA_5F900068475.1_202017-04-25] 322,774 sequences; 210,868,349 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq313031 96.9 5e-15 seq33957 95.1 2e-14 seq93196 87.8 2e-12 seq86066 87.8 2e-12 >seq313031 Length=621 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 86 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 27 Query 8718 CCCGACGAGGAGC 8730 |||| || ||||| Sbjct 26 CCCGCCGGGGAGC 14 Score = 91.5 bits (100), Expect = 2e-13 Identities = 64/72 (89%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| ||||||||||||| |||| |||| ||||| | ||||||||||||||||||||| Sbjct 86 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 27 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 26 CCCGCCGGGGAG 15 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 15 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 74 Query 139413 TACTAACGAGGAT 139425 ||||| ||||||| Sbjct 75 TACTACCGAGGAT 87 >seq33957 Length=3082 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||| ||||| |||| ||||| | ||||||||||||||||||||| Sbjct 3011 TCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGATTC 3070 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 3071 CCCGCCGGGGAG 3082 Score = 91.5 bits (100), Expect = 2e-13 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||| Sbjct 3008 CAATCCTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 3067 Query 11786 TTCCCCGACGAGGAG 11800 ||||||| || |||| Sbjct 3068 TTCCCCGCCGGGGAG 3082 Score = 89.7 bits (98), Expect = 7e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || |||||| |||||||||||||||||| | |||| |||||||| | ||||||| Sbjct 3082 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTTACCACTA 3023 Query 139413 TACTAACGAGGATT 139426 ||||| |||||||| Sbjct 3022 TACTACCGAGGATT 3009 >seq93196 Length=385 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||| | ||||| |||| ||||| | |||||||||||||| |||||| Sbjct 289 TCCTCGGTAGTATAGTGATAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTCCGATTC 348 Query 8718 CCCGACGAGGAGC 8730 |||| || ||||| Sbjct 349 CCCGCCGGGGAGC 361 Score = 82.4 bits (90), Expect = 1e-10 Identities = 62/72 (86%), Gaps = 1/72 (1%) Strand=Plus/Plus Query 11730 TCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 11788 |||||| |||||||||| || |||| |||| ||||| | |||||||||||||| |||||| Sbjct 289 TCCTCGGTAGTATAGTGATAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTCCGATTC 348 Query 11789 CCCGACGAGGAG 11800 |||| || |||| Sbjct 349 CCCGCCGGGGAG 360 >seq86066 Length=952 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/70 (89%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGTA-GTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 ||||| ||| ||||||||||||| |||| |||| ||||| | |||||||||||||||||| Sbjct 878 CAGTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGGTTCGA 937 Query 11786 TTCCCCGACG 11795 ||||||| || Sbjct 938 TTCCCCGCCG 947 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8650 TGCCTTATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGG 8709 || || | || ||| |||||||||||| ||||| |||| ||||| | ||||||||||||| Sbjct 873 TGTCTCAGTCTTCGGTAGTATAGTGGTAAGTATCCCCGCCTGTCACGCGGGAGACCGGGG 932 Query 8710 TTCGATTCCCCGACG 8724 |||||||||||| || Sbjct 933 TTCGATTCCCCGCCG 947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 650210783406560